RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 RETP07949 1114 aa12.62□□□□□ -0.39
TRAPPC4-213ENST00000533149 ATP4AP20648 1035 aa12.62□□□□□ -0.39
TRAPPC4-213ENST00000533149 U2AF2P26368 475 aaKnown RBP eCLIP12.62□□□□□ -0.39
TRAPPC4-213ENST00000533149 RPS9P46781 194 aaKnown RBP12.62□□□□□ -0.39
TRAPPC4-213ENST00000533149 RAB27AP51159 221 aa12.62□□□□□ -0.39
TRAPPC4-213ENST00000533149 GPC3P51654 580 aa12.62□□□□□ -0.39
TRAPPC4-213ENST00000533149 NAPAP54920 295 aa12.62□□□□□ -0.39
TRAPPC4-213ENST00000533149 CDC42EP1Q00587 391 aa12.62□□□□□ -0.39
TRAPPC4-213ENST00000533149 DNM1Q05193 864 aaKnown RBP12.62□□□□□ -0.39
TRAPPC4-213ENST00000533149 GNL2Q13823 731 aaKnown RBP12.62□□□□□ -0.39
TRAPPC4-213ENST00000533149 TYW1BQ6NUM6 668 aa12.62□□□□□ -0.39
TRAPPC4-213ENST00000533149 BRAPQ7Z569 592 aa12.62□□□□□ -0.39
TRAPPC4-213ENST00000533149 TEX2Q8IWB9 1127 aa12.62□□□□□ -0.39
TRAPPC4-213ENST00000533149 FAM177A1Q8N128 213 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC4-213ENST00000533149 CELF5Q8N6W0 485 aaKnown RBP12.62□□□□□ -0.39
TRAPPC4-213ENST00000533149 URGCPQ8TCY9 931 aa12.62□□□□□ -0.39
TRAPPC4-213ENST00000533149 OXER1Q8TDS5 423 aa12.62□□□□□ -0.39
TRAPPC4-213ENST00000533149 NLRP7Q8WX94 980 aa12.62□□□□□ -0.39
TRAPPC4-213ENST00000533149 CLDN23Q96B33 292 aa12.62□□□□□ -0.39
TRAPPC4-213ENST00000533149 ZNF707Q96C28 371 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC4-213ENST00000533149 FAM193BQ96PV7 902 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC4-213ENST00000533149 TMEM175Q9BSA9 504 aa12.62□□□□□ -0.39
TRAPPC4-213ENST00000533149 NT5C3AQ9H0P0 336 aa12.62□□□□□ -0.39
TRAPPC4-213ENST00000533149 FOXP1Q9H334 677 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC4-213ENST00000533149 LTB4R2Q9NPC1 389 aa12.62□□□□□ -0.39
TRAPPC4-213ENST00000533149 TFIP11Q9UBB9 837 aaKnown RBP12.62□□□□□ -0.39
TRAPPC4-213ENST00000533149 FAN1Q9Y2M0 1017 aa12.62□□□□□ -0.39
TRAPPC4-213ENST00000533149 MTF2Q9Y483 593 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC4-213ENST00000533149 CHD8Q9HCK8 2581 aa12.61□□□□□ -0.39
TRAPPC4-213ENST00000533149 ATRXP46100 2492 aa12.61□□□□□ -0.39
TRAPPC4-213ENST00000533149 SMCO2A6NFE2 343 aa12.61□□□□□ -0.39
TRAPPC4-213ENST00000533149 hCG_1984214I3L0E3 225 aa12.61□□□□□ -0.39
TRAPPC4-213ENST00000533149 TEX28O15482 410 aa12.61□□□□□ -0.39
TRAPPC4-213ENST00000533149 OFD1O75665 1012 aa12.61□□□□□ -0.39
TRAPPC4-213ENST00000533149 FOSP01100 380 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC4-213ENST00000533149 SOD2P04179 222 aa12.61□□□□□ -0.39
TRAPPC4-213ENST00000533149 FGFR4P22455 802 aa12.61□□□□□ -0.39
TRAPPC4-213ENST00000533149 PMLP29590 882 aa12.61□□□□□ -0.39
TRAPPC4-213ENST00000533149 KRT2P35908 639 aa12.61□□□□□ -0.39
TRAPPC4-213ENST00000533149 NR5A1Q13285 461 aa12.61□□□□□ -0.39
TRAPPC4-213ENST00000533149 PPP2R5DQ14738 602 aa12.61□□□□□ -0.39
TRAPPC4-213ENST00000533149 NPY5RQ15761 445 aa12.61□□□□□ -0.39
TRAPPC4-213ENST00000533149 TWF2Q6IBS0 349 aaKnown RBP12.61□□□□□ -0.39
TRAPPC4-213ENST00000533149 MTSS1LQ765P7 747 aa12.61□□□□□ -0.39
TRAPPC4-213ENST00000533149 NIPA1Q7RTP0 329 aa12.61□□□□□ -0.39
TRAPPC4-213ENST00000533149 TRMT1LQ7Z2T5 733 aaKnown RBP12.61□□□□□ -0.39
TRAPPC4-213ENST00000533149 LINC01465Q8N7H1 131 aa12.61□□□□□ -0.39
TRAPPC4-213ENST00000533149 ZNF713Q8N859 430 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC4-213ENST00000533149 CCDC148Q8NFR7 591 aa12.61□□□□□ -0.39
TRAPPC4-213ENST00000533149 CCDC12Q8WUD4 166 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC4-213ENST00000533149 LPPQ93052 612 aa12.61□□□□□ -0.39
TRAPPC4-213ENST00000533149 PGBD4Q96DM1 585 aa12.61□□□□□ -0.39
TRAPPC4-213ENST00000533149 FAM167AQ96KS9 214 aa12.61□□□□□ -0.39
TRAPPC4-213ENST00000533149 GCOM2Q9BZD3 368 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC4-213ENST00000533149 PRKD2Q9BZL6 878 aa12.61□□□□□ -0.39
TRAPPC4-213ENST00000533149 BRMS1Q9HCU9 246 aa12.61□□□□□ -0.39
TRAPPC4-213ENST00000533149 PRMT8Q9NR22 394 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC4-213ENST00000533149 KANSL3Q9P2N6 904 aa12.61□□□□□ -0.39
TRAPPC4-213ENST00000533149 PATJQ8NI35 1801 aa12.61□□□□□ -0.39
TRAPPC4-213ENST00000533149 ADAMTS3O15072 1205 aa12.6□□□□□ -0.39
TRAPPC4-213ENST00000533149 ZNF623O75123 536 aa12.6□□□□□ -0.39
TRAPPC4-213ENST00000533149 PSAPP07602 524 aa12.6□□□□□ -0.39
TRAPPC4-213ENST00000533149 NCLP19338 710 aaKnown RBP12.6□□□□□ -0.39
TRAPPC4-213ENST00000533149 SFPQP23246 707 aaKnown RBP eCLIP12.6□□□□□ -0.39
TRAPPC4-213ENST00000533149 FSHRP23945 695 aa12.6□□□□□ -0.39
TRAPPC4-213ENST00000533149 ZNF76P36508 570 aa12.6□□□□□ -0.39
TRAPPC4-213ENST00000533149 CSRP2Q16527 193 aa12.6□□□□□ -0.39
TRAPPC4-213ENST00000533149 LONRF3Q496Y0 759 aa12.6□□□□□ -0.39
TRAPPC4-213ENST00000533149 GALNT17Q6IS24 598 aa12.6□□□□□ -0.39
TRAPPC4-213ENST00000533149 TSSK4Q6SA08 328 aa12.6□□□□□ -0.39
TRAPPC4-213ENST00000533149 PARM1Q6UWI2 310 aa12.6□□□□□ -0.39
TRAPPC4-213ENST00000533149 ZNF280BQ86YH2 543 aa12.6□□□□□ -0.39
TRAPPC4-213ENST00000533149 NOSTRINQ8IVI9 506 aa12.6□□□□□ -0.39
TRAPPC4-213ENST00000533149 SMAP1Q8IYB5 467 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC4-213ENST00000533149 BLIDQ8IZY5 108 aa12.6□□□□□ -0.39
TRAPPC4-213ENST00000533149 LRRC71Q8N4P6 559 aa12.6□□□□□ -0.39
TRAPPC4-213ENST00000533149 FGF14Q92915 247 aa12.6□□□□□ -0.39
TRAPPC4-213ENST00000533149 ZNF668Q96K58 619 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC4-213ENST00000533149 ZNF396Q96N95 335 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC4-213ENST00000533149 RPP25Q9BUL9 199 aaKnown RBP12.6□□□□□ -0.39
TRAPPC4-213ENST00000533149 HERC2P3Q9BVR0 1158 aa12.6□□□□□ -0.39
TRAPPC4-213ENST00000533149 ZMYND12Q9H0C1 365 aa12.6□□□□□ -0.39
TRAPPC4-213ENST00000533149 RXFP1Q9HBX9 757 aa12.6□□□□□ -0.39
TRAPPC4-213ENST00000533149 C6orf50Q9HD87 102 aa12.6□□□□□ -0.39
TRAPPC4-213ENST00000533149 SEMA4GQ9NTN9 838 aa12.6□□□□□ -0.39
TRAPPC4-213ENST00000533149 FAM105AQ9NUU6 356 aa12.6□□□□□ -0.39
TRAPPC4-213ENST00000533149 TCEAL9Q9UHQ7 104 aa12.6□□□□□ -0.39
TRAPPC4-213ENST00000533149 CDH7Q9ULB5 785 aa12.6□□□□□ -0.39
TRAPPC4-213ENST00000533149 PCDHA4Q9UN74 947 aa12.6□□□□□ -0.39
TRAPPC4-213ENST00000533149 MRPS17Q9Y2R5 130 aaKnown RBP12.6□□□□□ -0.39
TRAPPC4-213ENST00000533149 DOCK8Q8NF50 2099 aa12.59□□□□□ -0.39
TRAPPC4-213ENST00000533149 GOLGA6L22H0YM25 854 aa12.59□□□□□ -0.39
TRAPPC4-213ENST00000533149 IPO5O00410 1097 aaKnown RBP12.59□□□□□ -0.39
TRAPPC4-213ENST00000533149 GAS2O43903 313 aaKnown RBP12.59□□□□□ -0.39
TRAPPC4-213ENST00000533149 PROS1P07225 676 aa12.59□□□□□ -0.39
TRAPPC4-213ENST00000533149 MYBP10242 640 aa12.59□□□□□ -0.39
TRAPPC4-213ENST00000533149 GLUD2P49448 558 aa12.59□□□□□ -0.39
TRAPPC4-213ENST00000533149 KRT85P78386 507 aa12.59□□□□□ -0.39
TRAPPC4-213ENST00000533149 ATL3Q6DD88 541 aa12.59□□□□□ -0.39
TRAPPC4-213ENST00000533149 IL31Q6EBC2 164 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms