RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 TTC9Q92623 222 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 TCEAL3Q969E4 200 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 AIFM3Q96NN9 605 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 PIGSQ96S52 555 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 GAS2L1Q99501 681 aaPredicted RBP2.02□□□□□ -2.09
KNL1-211ENST00000533001 MTA3Q9BTC8 594 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 CHMP4AQ9BY43 222 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 EBF2Q9HAK2 575 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 LIMD1Q9UGP4 676 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 ZMIZ1Q9ULJ6 1067 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 INTS1Q8N201 2190 aaKnown RBP2.02□□□□□ -2.09
KNL1-211ENST00000533001 MYO7BQ6PIF6 2116 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 MPDZO75970 2070 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 I6L893 689 aaPredicted RBP2.02□□□□□ -2.09
KNL1-211ENST00000533001 SLC37A4O43826 429 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 GLRX3O76003 335 aaKnown RBP2.02□□□□□ -2.09
KNL1-211ENST00000533001 FGFR4P22455 802 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 CPT1AP50416 773 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 ACTR2P61160 394 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 TDGQ13569 410 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 TOB2Q14106 344 aaPredicted RBP2.02□□□□□ -2.09
KNL1-211ENST00000533001 IKBKEQ14164 716 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 AAK1Q2M2I8 961 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 KCNT1Q5JUK3 1230 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 TANGO2Q6ICL3 276 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 FAM117BQ6P1L5 589 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 TAF2Q6P1X5 1199 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 KCNK18Q7Z418 384 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 MTMR9Q96QG7 549 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 SNTG2Q9NY99 539 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 MBD1Q9UIS9 605 aaPredicted RBP2.02□□□□□ -2.09
KNL1-211ENST00000533001 CCPG1Q9ULG6 757 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 HES2Q9Y543 173 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 NUMBLQ9Y6R0 609 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 HCFC1P51610 2035 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 ZNF407Q9C0G0 2248 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 RAI1Q7Z5J4 1906 aaPredicted RBP2.02□□□□□ -2.09
KNL1-211ENST00000533001 FAM92AA1XBS5 289 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 B4GALT5O43286 388 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 KPNA6O60684 536 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 LRP3O75074 770 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 PPP1R37O75864 691 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 SDSP20132 328 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 SPINK2P20155 84 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 KLRC1P26715 233 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 TCF7P36402 384 aaPredicted RBP2.02□□□□□ -2.09
KNL1-211ENST00000533001 NUCB1Q02818 461 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 PDE4BQ07343 736 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 PUM1Q14671 1186 aaKnown RBP eCLIP2.02□□□□□ -2.09
KNL1-211ENST00000533001 ZKSCAN2Q63HK3 967 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 TMTC3Q6ZXV5 915 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 VPS37DQ86XT2 251 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 RUBCNQ92622 972 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 SLC5A5Q92911 643 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 C11orf84Q9BUA3 381 aaPredicted RBP2.02□□□□□ -2.09
KNL1-211ENST00000533001 ADAM33Q9BZ11 813 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 CRNKL1Q9BZJ0 848 aaKnown RBP2.02□□□□□ -2.09
KNL1-211ENST00000533001 LTB4R2Q9NPC1 389 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 GPR27Q9NS67 375 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 FNIP2Q9P278 1114 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 EBF1Q9UH73 591 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 ARID1AO14497 2285 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 DCDC2BA2VCK2 349 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 SH2B2O14492 632 aaPredicted RBP2.02□□□□□ -2.09
KNL1-211ENST00000533001 LYPLA2O95372 231 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 ARL2P36404 184 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 BCAR1P56945 870 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 MRPS6P82932 125 aaKnown RBP2.02□□□□□ -2.09
KNL1-211ENST00000533001 PPP2R5BQ15173 497 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 DGKDQ16760 1214 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 NIPA1Q7RTP0 329 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 TSC1Q92574 1164 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 ATP6V0A1Q93050 837 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 PSMG3-AS1Q96PY0 264 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 USP26Q9BXU7 913 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 NFKBIZQ9BYH8 718 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 MSRAQ9UJ68 235 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 DOCK7Q96N67 2140 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 PLECQ15149 4684 aaKnown RBP2.02□□□□□ -2.09
KNL1-211ENST00000533001 PTPRJQ12913 1337 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 MSH4O15457 936 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 MICAL2O94851 1124 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 GH1P01241 217 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 ARF4P18085 180 aaPredicted RBP2.02□□□□□ -2.09
KNL1-211ENST00000533001 CHMLP26374 656 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 THPOP40225 353 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 PDX1P52945 283 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 SATB1Q01826 763 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 CSRP2Q16527 193 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 GPATCH4Q5T3I0 446 aaKnown RBP2.02□□□□□ -2.09
KNL1-211ENST00000533001 DDX53Q86TM3 631 aaKnown RBP2.02□□□□□ -2.09
KNL1-211ENST00000533001 OSMRQ99650 979 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 NTPCRQ9BSD7 190 aaKnown RBP2.02□□□□□ -2.09
KNL1-211ENST00000533001 DSCC1Q9BVC3 393 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 SMOC1Q9H4F8 434 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 ARHGEF10LQ9HCE6 1279 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 TMEM260Q9NX78 707 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 TUBE1Q9UJT0 475 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 IVNS1ABPQ9Y6Y0 642 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 ABCA1O95477 2261 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms