RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 DESP17661 470 aa10.05□□□□□ -0.8
BDNF-216ENST00000532997 STAT2P52630 851 aa10.05□□□□□ -0.8
BDNF-216ENST00000532997 MXRA7P84157 204 aa10.05□□□□□ -0.8
BDNF-216ENST00000532997 KLRC3Q07444 240 aa10.05□□□□□ -0.8
BDNF-216ENST00000532997 KIF22Q14807 665 aa10.05□□□□□ -0.8
BDNF-216ENST00000532997 NFIL3Q16649 462 aa10.05□□□□□ -0.8
BDNF-216ENST00000532997 WDR78Q5VTH9 848 aa10.05□□□□□ -0.8
BDNF-216ENST00000532997 ENOSF1Q7L5Y1 443 aa10.05□□□□□ -0.8
BDNF-216ENST00000532997 SPDL1Q96EA4 605 aa10.05□□□□□ -0.8
BDNF-216ENST00000532997 PKD2L1Q9P0L9 805 aa10.05□□□□□ -0.8
BDNF-216ENST00000532997 SMG5Q9UPR3 1016 aaKnown RBP10.05□□□□□ -0.8
BDNF-216ENST00000532997 ZNF148Q9UQR1 794 aa10.05□□□□□ -0.8
BDNF-216ENST00000532997 ASTN1O14525 1302 aa10.05□□□□□ -0.8
BDNF-216ENST00000532997 ITGB4P16144 1822 aa10.04□□□□□ -0.8
BDNF-216ENST00000532997 POC1B-GALNT4F8VUJ3 575 aa10.04□□□□□ -0.8
BDNF-216ENST00000532997 H0YCG3 227 aa10.04□□□□□ -0.8
BDNF-216ENST00000532997 PPEF1O14829 653 aaPredicted RBP10.04□□□□□ -0.8
BDNF-216ENST00000532997 CIB2O75838 187 aa10.04□□□□□ -0.8
BDNF-216ENST00000532997 MSH2P43246 934 aa10.04□□□□□ -0.8
BDNF-216ENST00000532997 IFI35P80217 286 aaPredicted RBP10.04□□□□□ -0.8
BDNF-216ENST00000532997 RASA3Q14644 834 aa10.04□□□□□ -0.8
BDNF-216ENST00000532997 ZC2HC1CQ53FD0 456 aaPredicted RBP10.04□□□□□ -0.8
BDNF-216ENST00000532997 PADI6Q6TGC4 694 aa10.04□□□□□ -0.8
BDNF-216ENST00000532997 MAGEB18Q96M61 343 aa10.04□□□□□ -0.8
BDNF-216ENST00000532997 FGFBP2Q9BYJ0 223 aa10.04□□□□□ -0.8
BDNF-216ENST00000532997 CDC42EP4Q9H3Q1 356 aaKnown RBP10.04□□□□□ -0.8
BDNF-216ENST00000532997 NKRFO15226 690 aaKnown RBP eCLIP10.04□□□□□ -0.8
BDNF-216ENST00000532997 DDX3YO15523 660 aaKnown RBP10.04□□□□□ -0.8
BDNF-216ENST00000532997 SHBGP04278 402 aa10.04□□□□□ -0.8
BDNF-216ENST00000532997 SERPINB2P05120 415 aa10.04□□□□□ -0.8
BDNF-216ENST00000532997 CA4P22748 312 aa10.04□□□□□ -0.8
BDNF-216ENST00000532997 CLK2P49760 499 aaKnown RBP10.04□□□□□ -0.8
BDNF-216ENST00000532997 RHBDL3P58872 404 aa10.04□□□□□ -0.8
BDNF-216ENST00000532997 PSMC6P62333 389 aa10.04□□□□□ -0.8
BDNF-216ENST00000532997 CENPCQ03188 943 aa10.04□□□□□ -0.8
BDNF-216ENST00000532997 CNGA2Q16280 664 aa10.04□□□□□ -0.8
BDNF-216ENST00000532997 ARSHQ5FYA8 562 aa10.04□□□□□ -0.8
BDNF-216ENST00000532997 AP1ARQ63HQ0 302 aa10.04□□□□□ -0.8
BDNF-216ENST00000532997 KRT39Q6A163 491 aa10.04□□□□□ -0.8
BDNF-216ENST00000532997 TRMT1LQ7Z2T5 733 aaKnown RBP10.04□□□□□ -0.8
BDNF-216ENST00000532997 C1orf54Q8WWF1 131 aa10.04□□□□□ -0.8
BDNF-216ENST00000532997 MLXIPLQ9NP71 852 aa10.04□□□□□ -0.8
BDNF-216ENST00000532997 ATF5Q9Y2D1 282 aaPredicted RBP10.04□□□□□ -0.8
BDNF-216ENST00000532997 PCDHA2Q9Y5H9 948 aa10.04□□□□□ -0.8
BDNF-216ENST00000532997 LAMB1P07942 1786 aa10.04□□□□□ -0.8
BDNF-216ENST00000532997 FAM47DPA6NHR8 397 aa10.04□□□□□ -0.8
BDNF-216ENST00000532997 PEX19P40855 299 aa10.04□□□□□ -0.8
BDNF-216ENST00000532997 RBBP5Q15291 538 aaKnown RBP10.04□□□□□ -0.8
BDNF-216ENST00000532997 TRIP13Q15645 432 aaPredicted RBP10.04□□□□□ -0.8
BDNF-216ENST00000532997 MFSD5Q6N075 450 aa10.04□□□□□ -0.8
BDNF-216ENST00000532997 NSMFQ6X4W1 530 aa10.04□□□□□ -0.8
BDNF-216ENST00000532997 FAM47EQ6ZV65 393 aa10.04□□□□□ -0.8
BDNF-216ENST00000532997 TBC1D16Q8TBP0 767 aa10.04□□□□□ -0.8
BDNF-216ENST00000532997 ATP8B4Q8TF62 1192 aa10.04□□□□□ -0.8
BDNF-216ENST00000532997 SEC14L1Q92503 715 aa10.04□□□□□ -0.8
BDNF-216ENST00000532997 ARHGEF26Q96DR7 871 aa10.04□□□□□ -0.8
BDNF-216ENST00000532997 AFF2P51816 1311 aa10.04□□□□□ -0.8
BDNF-216ENST00000532997 KIF3CO14782 793 aa10.03□□□□□ -0.8
BDNF-216ENST00000532997 CLDN3O15551 220 aa10.03□□□□□ -0.8
BDNF-216ENST00000532997 PPIP5K2O43314 1243 aa10.03□□□□□ -0.8
BDNF-216ENST00000532997 ADRA2BP18089 450 aa10.03□□□□□ -0.8
BDNF-216ENST00000532997 DMP1Q13316 513 aaPredicted RBP10.03□□□□□ -0.8
BDNF-216ENST00000532997 AUHQ13825 339 aaKnown RBP10.03□□□□□ -0.8
BDNF-216ENST00000532997 ZNF720Q7Z2F6 126 aa10.03□□□□□ -0.8
BDNF-216ENST00000532997 APLFQ8IW19 511 aaPredicted RBP10.03□□□□□ -0.8
BDNF-216ENST00000532997 TIPINQ9BVW5 301 aa10.03□□□□□ -0.8
BDNF-216ENST00000532997 DNAJC17Q9NVM6 304 aaKnown RBP10.03□□□□□ -0.8
BDNF-216ENST00000532997 STOML1Q9UBI4 398 aa10.03□□□□□ -0.8
BDNF-216ENST00000532997 SCINQ9Y6U3 715 aa10.03□□□□□ -0.8
BDNF-216ENST00000532997 DLEC1Q9Y238 1755 aa10.03□□□□□ -0.8
BDNF-216ENST00000532997 MYH1P12882 1939 aa10.03□□□□□ -0.8
BDNF-216ENST00000532997 ABCD1P33897 745 aa10.03□□□□□ -0.8
BDNF-216ENST00000532997 KCNJ1P48048 391 aa10.03□□□□□ -0.8
BDNF-216ENST00000532997 HADHBP55084 474 aaKnown RBP10.03□□□□□ -0.8
BDNF-216ENST00000532997 PPATQ06203 517 aa10.03□□□□□ -0.8
BDNF-216ENST00000532997 IZUMO3Q5VZ72 239 aa10.03□□□□□ -0.8
BDNF-216ENST00000532997 PHLDB3Q6NSJ2 640 aa10.03□□□□□ -0.8
BDNF-216ENST00000532997 HHIPL2Q6UWX4 724 aa10.03□□□□□ -0.8
BDNF-216ENST00000532997 STAMBPL1Q96FJ0 436 aa10.03□□□□□ -0.8
BDNF-216ENST00000532997 UBN1Q9NPG3 1134 aa10.03□□□□□ -0.8
BDNF-216ENST00000532997 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.03□□□□□ -0.8
BDNF-216ENST00000532997 SNED1Q8TER0 1413 aa10.03□□□□□ -0.8
BDNF-216ENST00000532997 TTC4O95801 387 aa10.03□□□□□ -0.8
BDNF-216ENST00000532997 SKIP12755 728 aa10.03□□□□□ -0.8
BDNF-216ENST00000532997 ALDH1B1P30837 517 aa10.03□□□□□ -0.8
BDNF-216ENST00000532997 FAM102BQ5T8I3 360 aa10.03□□□□□ -0.8
BDNF-216ENST00000532997 DCUN1D2Q6PH85 259 aa10.03□□□□□ -0.8
BDNF-216ENST00000532997 PAXIP1Q6ZW49 1069 aaPredicted RBP10.03□□□□□ -0.8
BDNF-216ENST00000532997 CENPUQ71F23 418 aa10.03□□□□□ -0.8
BDNF-216ENST00000532997 PIGWQ7Z7B1 504 aa10.03□□□□□ -0.8
BDNF-216ENST00000532997 RHOT1Q8IXI2 618 aa10.03□□□□□ -0.8
BDNF-216ENST00000532997 PRELID2Q8N945 189 aa10.03□□□□□ -0.8
BDNF-216ENST00000532997 RBM41Q96IZ5 413 aaKnown RBP10.03□□□□□ -0.8
BDNF-216ENST00000532997 LXNQ9BS40 222 aa10.03□□□□□ -0.8
BDNF-216ENST00000532997 CCDC134Q9H6E4 229 aa10.03□□□□□ -0.8
BDNF-216ENST00000532997 SAYSD1Q9NPB0 183 aa10.03□□□□□ -0.8
BDNF-216ENST00000532997 GGT7Q9UJ14 662 aa10.03□□□□□ -0.8
BDNF-216ENST00000532997 AGTPBP1Q9UPW5 1226 aa10.03□□□□□ -0.8
BDNF-216ENST00000532997 SLIT2O94813 1529 aa10.03□□□□□ -0.8
BDNF-216ENST00000532997 CYP26A1O43174 497 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms