RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 MYL1P05976 194 aa27.21■■□□□ 1.95
USP48-214ENST00000532737 ITGA4P13612 1032 aa27.21■■□□□ 1.95
USP48-214ENST00000532737 ABCD1P33897 745 aa27.21■■□□□ 1.95
USP48-214ENST00000532737 UBE2HP62256 183 aa27.21■■□□□ 1.95
USP48-214ENST00000532737 ZBTB33Q86T24 672 aa27.21■■□□□ 1.95
USP48-214ENST00000532737 MAP4K3Q8IVH8 894 aa27.21■■□□□ 1.95
USP48-214ENST00000532737 FIBCD1Q8N539 461 aa27.21■■□□□ 1.95
USP48-214ENST00000532737 ADPGKQ9BRR6 497 aa27.21■■□□□ 1.95
USP48-214ENST00000532737 APOL6Q9BWW8 343 aa27.21■■□□□ 1.95
USP48-214ENST00000532737 CDT1Q9H211 546 aa27.21■■□□□ 1.95
USP48-214ENST00000532737 ZNF576Q9H609 170 aa27.21■■□□□ 1.95
USP48-214ENST00000532737 OFD1O75665 1012 aa27.2■■□□□ 1.94
USP48-214ENST00000532737 PIGRP01833 764 aa27.2■■□□□ 1.94
USP48-214ENST00000532737 KCNA1Q09470 495 aa27.2■■□□□ 1.94
USP48-214ENST00000532737 DPYDQ12882 1025 aa27.2■■□□□ 1.94
USP48-214ENST00000532737 GRIN2CQ14957 1233 aa27.2■■□□□ 1.94
USP48-214ENST00000532737 DCAF4L1Q3SXM0 396 aa27.2■■□□□ 1.94
USP48-214ENST00000532737 ZNF568Q3ZCX4 644 aa27.2■■□□□ 1.94
USP48-214ENST00000532737 FAM26FQ5R3K3 315 aa27.2■■□□□ 1.94
USP48-214ENST00000532737 KANK3Q6NY19 840 aa27.2■■□□□ 1.94
USP48-214ENST00000532737 ABI1Q8IZP0 508 aa27.2■■□□□ 1.94
USP48-214ENST00000532737 HVCN1Q96D96 273 aa27.2■■□□□ 1.94
USP48-214ENST00000532737 BICD1Q96G01 975 aa27.2■■□□□ 1.94
USP48-214ENST00000532737 TCHPQ9BT92 498 aa27.2■■□□□ 1.94
USP48-214ENST00000532737 IKZF4Q9H2S9 585 aa27.2■■□□□ 1.94
USP48-214ENST00000532737 PCDHB13Q9Y5F0 798 aa27.2■■□□□ 1.94
USP48-214ENST00000532737 MRPL42Q9Y6G3 142 aaKnown RBP27.2■■□□□ 1.94
USP48-214ENST00000532737 TOM1L1O75674 476 aa27.19■■□□□ 1.94
USP48-214ENST00000532737 LINC00271P0C7V0 271 aa27.19■■□□□ 1.94
USP48-214ENST00000532737 AKAP5P24588 427 aa27.19■■□□□ 1.94
USP48-214ENST00000532737 LIG4P49917 911 aa27.19■■□□□ 1.94
USP48-214ENST00000532737 GLB1LQ6UWU2 654 aa27.19■■□□□ 1.94
USP48-214ENST00000532737 MPZL3Q6UWV2 235 aa27.19■■□□□ 1.94
USP48-214ENST00000532737 TIGD1Q96MW7 591 aa27.19■■□□□ 1.94
USP48-214ENST00000532737 CERS4Q9HA82 394 aa27.19■■□□□ 1.94
USP48-214ENST00000532737 RSAD1Q9HA92 442 aa27.19■■□□□ 1.94
USP48-214ENST00000532737 HCSTQ9UBK5 93 aa27.19■■□□□ 1.94
USP48-214ENST00000532737 ANKRD63C9JTQ0 380 aa27.18■■□□□ 1.94
USP48-214ENST00000532737 HNRNPDLO14979 420 aaKnown RBP27.18■■□□□ 1.94
USP48-214ENST00000532737 PRPF6O94906 941 aaKnown RBP27.18■■□□□ 1.94
USP48-214ENST00000532737 AFF1P51825 1210 aaKnown RBP27.18■■□□□ 1.94
USP48-214ENST00000532737 ALCAMQ13740 583 aa27.18■■□□□ 1.94
USP48-214ENST00000532737 POSTNQ15063 836 aa27.18■■□□□ 1.94
USP48-214ENST00000532737 KMT5BQ4FZB7 885 aa27.18■■□□□ 1.94
USP48-214ENST00000532737 L1TD1Q5T7N2 865 aaKnown RBP27.18■■□□□ 1.94
USP48-214ENST00000532737 SLC39A4Q6P5W5 647 aa27.18■■□□□ 1.94
USP48-214ENST00000532737 LRRC55Q6ZSA7 311 aa27.18■■□□□ 1.94
USP48-214ENST00000532737 HACE1Q8IYU2 909 aa27.18■■□□□ 1.94
USP48-214ENST00000532737 GBP4Q96PP9 640 aa27.18■■□□□ 1.94
USP48-214ENST00000532737 ACCSQ96QU6 501 aa27.18■■□□□ 1.94
USP48-214ENST00000532737 C17orf80Q9BSJ5 609 aa27.18■■□□□ 1.94
USP48-214ENST00000532737 HAPLN2Q9GZV7 340 aa27.18■■□□□ 1.94
USP48-214ENST00000532737 SNTG2Q9NY99 539 aa27.18■■□□□ 1.94
USP48-214ENST00000532737 ANKFY1Q9P2R3 1169 aa27.18■■□□□ 1.94
USP48-214ENST00000532737 INPP5FQ9Y2H2 1132 aa27.18■■□□□ 1.94
USP48-214ENST00000532737 RPN1P04843 607 aaKnown RBP27.17■■□□□ 1.94
USP48-214ENST00000532737 MCF2P10911 925 aa27.17■■□□□ 1.94
USP48-214ENST00000532737 HARSP12081 509 aaKnown RBP27.17■■□□□ 1.94
USP48-214ENST00000532737 ERVK-21P61565 698 aa27.17■■□□□ 1.94
USP48-214ENST00000532737 NOMO2Q5JPE7 1267 aa27.17■■□□□ 1.94
USP48-214ENST00000532737 EPM2AIP1Q7L775 607 aaPredicted RBP27.17■■□□□ 1.94
USP48-214ENST00000532737 APBB1IPQ7Z5R6 666 aaPredicted RBP27.17■■□□□ 1.94
USP48-214ENST00000532737 CEP120Q8N960 986 aa27.17■■□□□ 1.94
USP48-214ENST00000532737 CCDC34Q96HJ3 373 aa27.17■■□□□ 1.94
USP48-214ENST00000532737 TGS1Q96RS0 853 aaKnown RBP27.17■■□□□ 1.94
USP48-214ENST00000532737 GAD1Q99259 594 aa27.17■■□□□ 1.94
USP48-214ENST00000532737 UBN1Q9NPG3 1134 aa27.17■■□□□ 1.94
USP48-214ENST00000532737 TYW1Q9NV66 732 aaKnown RBP27.17■■□□□ 1.94
USP48-214ENST00000532737 PARP2Q9UGN5 583 aa27.17■■□□□ 1.94
USP48-214ENST00000532737 TISP43B9A030 160 aa27.16■■□□□ 1.94
USP48-214ENST00000532737 CLDN3O15551 220 aa27.16■■□□□ 1.94
USP48-214ENST00000532737 MCL1Q07820 350 aa27.16■■□□□ 1.94
USP48-214ENST00000532737 PNOCQ13519 176 aa27.16■■□□□ 1.94
USP48-214ENST00000532737 SLC39A2Q9NP94 309 aa27.16■■□□□ 1.94
USP48-214ENST00000532737 EXOC1Q9NV70 894 aa27.16■■□□□ 1.94
USP48-214ENST00000532737 KLK14Q9P0G3 267 aa27.16■■□□□ 1.94
USP48-214ENST00000532737 MTUS1Q9ULD2 1270 aa27.16■■□□□ 1.94
USP48-214ENST00000532737 GIT1Q9Y2X7 761 aa27.16■■□□□ 1.94
USP48-214ENST00000532737 TTC28Q96AY4 2481 aa27.16■■□□□ 1.94
USP48-214ENST00000532737 SPTBN5Q9NRC6 3674 aaKnown RBP27.15■■□□□ 1.94
USP48-214ENST00000532737 KINO60870 393 aaKnown RBP27.15■■□□□ 1.94
USP48-214ENST00000532737 HOXD13P35453 343 aa27.15■■□□□ 1.94
USP48-214ENST00000532737 MLH1P40692 756 aa27.15■■□□□ 1.94
USP48-214ENST00000532737 GRM5P41594 1212 aa27.15■■□□□ 1.94
USP48-214ENST00000532737 NOLC1Q14978 699 aaKnown RBP eCLIP27.15■■□□□ 1.94
USP48-214ENST00000532737 STXBP4Q6ZWJ1 553 aa27.15■■□□□ 1.94
USP48-214ENST00000532737 TMEM192Q8IY95 271 aa27.15■■□□□ 1.94
USP48-214ENST00000532737 ARNTL2Q8WYA1 636 aa27.15■■□□□ 1.94
USP48-214ENST00000532737 CLP1Q92989 425 aaKnown RBP27.15■■□□□ 1.94
USP48-214ENST00000532737 ZFP42Q96MM3 310 aa27.15■■□□□ 1.94
USP48-214ENST00000532737 CWH43Q9H720 699 aa27.15■■□□□ 1.94
USP48-214ENST00000532737 LMBRD1Q9NUN5 540 aa27.15■■□□□ 1.94
USP48-214ENST00000532737 MIOSQ9NXC5 875 aa27.15■■□□□ 1.94
USP48-214ENST00000532737 EXOC7Q9UPT5 735 aa27.15■■□□□ 1.94
USP48-214ENST00000532737 GDAQ9Y2T3 454 aa27.15■■□□□ 1.94
USP48-214ENST00000532737 ARL5CA6NH57 179 aa27.14■■□□□ 1.94
USP48-214ENST00000532737 INPPL1O15357 1258 aa27.14■■□□□ 1.94
USP48-214ENST00000532737 RECQL4O94761 1208 aa27.14■■□□□ 1.94
USP48-214ENST00000532737 MATR3P43243 847 aaKnown RBP eCLIP27.14■■□□□ 1.94
USP48-214ENST00000532737 OSTNP61366 133 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms