RNA–Protein interactions for RNA: ENST00000532024.1

PPFIA1-220, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-220ENST00000532024 ZBTB33Q86T24 672 aa12.94□□□□□ -0.34
PPFIA1-220ENST00000532024 CDR2LQ86X02 465 aaPredicted RBP12.94□□□□□ -0.34
PPFIA1-220ENST00000532024 TRIML1Q8N9V2 468 aa12.94□□□□□ -0.34
PPFIA1-220ENST00000532024 SPATA20Q8TB22 786 aa12.94□□□□□ -0.34
PPFIA1-220ENST00000532024 ZNF507Q8TCN5 953 aa12.94□□□□□ -0.34
PPFIA1-220ENST00000532024 POMGNT1Q8WZA1 660 aa12.94□□□□□ -0.34
PPFIA1-220ENST00000532024 RPS6KC1Q96S38 1066 aa12.94□□□□□ -0.34
PPFIA1-220ENST00000532024 MSTO1Q9BUK6 570 aa12.94□□□□□ -0.34
PPFIA1-220ENST00000532024 EIF2AQ9BY44 585 aaKnown RBP12.94□□□□□ -0.34
PPFIA1-220ENST00000532024 TMEM117Q9H0C3 514 aa12.94□□□□□ -0.34
PPFIA1-220ENST00000532024 CDT1Q9H211 546 aa12.94□□□□□ -0.34
PPFIA1-220ENST00000532024 NXF3Q9H4D5 531 aaKnown RBP12.94□□□□□ -0.34
PPFIA1-220ENST00000532024 RSAD1Q9HA92 442 aa12.94□□□□□ -0.34
PPFIA1-220ENST00000532024 TTC3P53804 2025 aa12.94□□□□□ -0.34
PPFIA1-220ENST00000532024 RANBP2P49792 3224 aaKnown RBP12.94□□□□□ -0.34
PPFIA1-220ENST00000532024 COL4A6Q14031 1691 aa12.93□□□□□ -0.34
PPFIA1-220ENST00000532024 CARNS1A5YM72 827 aa12.93□□□□□ -0.34
PPFIA1-220ENST00000532024 TTLL13PA6NNM8 815 aa12.93□□□□□ -0.34
PPFIA1-220ENST00000532024 OGTO15294 1046 aa12.93□□□□□ -0.34
PPFIA1-220ENST00000532024 DGKIO75912 1065 aa12.93□□□□□ -0.34
PPFIA1-220ENST00000532024 LDHAP00338 332 aaKnown RBP12.93□□□□□ -0.34
PPFIA1-220ENST00000532024 EDN1P05305 212 aa12.93□□□□□ -0.34
PPFIA1-220ENST00000532024 GARTP22102 1010 aa12.93□□□□□ -0.34
PPFIA1-220ENST00000532024 GRM5P41594 1212 aa12.93□□□□□ -0.34
PPFIA1-220ENST00000532024 HTRA4P83105 476 aaPredicted RBP12.93□□□□□ -0.34
PPFIA1-220ENST00000532024 STK4Q13043 487 aa12.93□□□□□ -0.34
PPFIA1-220ENST00000532024 BTG3Q14201 252 aaPredicted RBP12.93□□□□□ -0.34
PPFIA1-220ENST00000532024 KNOP1Q1ED39 458 aaKnown RBP12.93□□□□□ -0.34
PPFIA1-220ENST00000532024 ZNF658Q5TYW1 1059 aaPredicted RBP12.93□□□□□ -0.34
PPFIA1-220ENST00000532024 EEF1DP3Q658K8 133 aa12.93□□□□□ -0.34
PPFIA1-220ENST00000532024 ARMCX5Q6P1M9 558 aa12.93□□□□□ -0.34
PPFIA1-220ENST00000532024 ZNF598Q86UK7 904 aaKnown RBP12.93□□□□□ -0.34
PPFIA1-220ENST00000532024 NELFCDQ8IXH7 590 aa12.93□□□□□ -0.34
PPFIA1-220ENST00000532024 CMTR2Q8IYT2 770 aaKnown RBP12.93□□□□□ -0.34
PPFIA1-220ENST00000532024 LRRC43Q8N309 656 aa12.93□□□□□ -0.34
PPFIA1-220ENST00000532024 GUF1Q8N442 669 aaKnown RBP12.93□□□□□ -0.34
PPFIA1-220ENST00000532024 KIAA0895Q8NCT3 520 aa12.93□□□□□ -0.34
PPFIA1-220ENST00000532024 SCFD1Q8WVM8 642 aa12.93□□□□□ -0.34
PPFIA1-220ENST00000532024 APOL6Q9BWW8 343 aa12.93□□□□□ -0.34
PPFIA1-220ENST00000532024 FGFBP2Q9BYJ0 223 aa12.93□□□□□ -0.34
PPFIA1-220ENST00000532024 PTPRHQ9HD43 1115 aa12.93□□□□□ -0.34
PPFIA1-220ENST00000532024 KIAA1468Q9P260 1216 aa12.93□□□□□ -0.34
PPFIA1-220ENST00000532024 KANSL3Q9P2N6 904 aa12.93□□□□□ -0.34
PPFIA1-220ENST00000532024 PARP2Q9UGN5 583 aa12.93□□□□□ -0.34
PPFIA1-220ENST00000532024 USP20Q9Y2K6 914 aa12.93□□□□□ -0.34
PPFIA1-220ENST00000532024 GIT1Q9Y2X7 761 aa12.93□□□□□ -0.34
PPFIA1-220ENST00000532024 A0A0B4J269 797 aa12.92□□□□□ -0.34
PPFIA1-220ENST00000532024 TBKBP1A7MCY6 615 aa12.92□□□□□ -0.34
PPFIA1-220ENST00000532024 CLTAP09496 248 aa12.92□□□□□ -0.34
PPFIA1-220ENST00000532024 FGFR1P11362 822 aa12.92□□□□□ -0.34
PPFIA1-220ENST00000532024 ATF7P17544 494 aaPredicted RBP12.92□□□□□ -0.34
PPFIA1-220ENST00000532024 RNASELQ05823 741 aaKnown RBP12.92□□□□□ -0.34
PPFIA1-220ENST00000532024 SKOR2Q2VWA4 1001 aaPredicted RBP12.92□□□□□ -0.34
PPFIA1-220ENST00000532024 NOMO2Q5JPE7 1267 aa12.92□□□□□ -0.34
PPFIA1-220ENST00000532024 TMCO2Q7Z6W1 182 aaPredicted RBP12.92□□□□□ -0.34
PPFIA1-220ENST00000532024 THNSL1Q8IYQ7 743 aa12.92□□□□□ -0.34
PPFIA1-220ENST00000532024 CRIPAKQ8N1N5 446 aa12.92□□□□□ -0.34
PPFIA1-220ENST00000532024 FIBCD1Q8N539 461 aa12.92□□□□□ -0.34
PPFIA1-220ENST00000532024 SMG8Q8ND04 991 aaKnown RBP12.92□□□□□ -0.34
PPFIA1-220ENST00000532024 GLIS3Q8NEA6 775 aa12.92□□□□□ -0.34
PPFIA1-220ENST00000532024 GPT2Q8TD30 523 aa12.92□□□□□ -0.34
PPFIA1-220ENST00000532024 HELQQ8TDG4 1101 aa12.92□□□□□ -0.34
PPFIA1-220ENST00000532024 ACAP3Q96P50 834 aa12.92□□□□□ -0.34
PPFIA1-220ENST00000532024 SLC28A3Q9HAS3 691 aa12.92□□□□□ -0.34
PPFIA1-220ENST00000532024 KIAA1586Q9HCI6 787 aa12.92□□□□□ -0.34
PPFIA1-220ENST00000532024 TYW1Q9NV66 732 aaKnown RBP12.92□□□□□ -0.34
PPFIA1-220ENST00000532024 AGO2Q9UKV8 859 aaKnown RBP12.92□□□□□ -0.34
PPFIA1-220ENST00000532024 INPP5FQ9Y2H2 1132 aa12.92□□□□□ -0.34
PPFIA1-220ENST00000532024 RWDD3Q9Y3V2 267 aa12.92□□□□□ -0.34
PPFIA1-220ENST00000532024 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.92□□□□□ -0.34
PPFIA1-220ENST00000532024 STYXL1Q9Y6J8 313 aa12.92□□□□□ -0.34
PPFIA1-220ENST00000532024 SZT2Q5T011 3432 aa12.92□□□□□ -0.34
PPFIA1-220ENST00000532024 GRXCR1A8MXD5 290 aa12.91□□□□□ -0.34
PPFIA1-220ENST00000532024 ANKRD63C9JTQ0 380 aa12.91□□□□□ -0.34
PPFIA1-220ENST00000532024 PDXKO00764 312 aa12.91□□□□□ -0.34
PPFIA1-220ENST00000532024 PSMA7O14818 248 aa12.91□□□□□ -0.34
PPFIA1-220ENST00000532024 CALUO43852 315 aaPredicted RBP12.91□□□□□ -0.34
PPFIA1-220ENST00000532024 RECQL4O94761 1208 aa12.91□□□□□ -0.34
PPFIA1-220ENST00000532024 DNAJB2P25686 324 aa12.91□□□□□ -0.34
PPFIA1-220ENST00000532024 RABGGTBP53611 331 aa12.91□□□□□ -0.34
PPFIA1-220ENST00000532024 KCNA1Q09470 495 aa12.91□□□□□ -0.34
PPFIA1-220ENST00000532024 PAN2Q504Q3 1202 aaKnown RBP12.91□□□□□ -0.34
PPFIA1-220ENST00000532024 COBLL1Q53SF7 1204 aa12.91□□□□□ -0.34
PPFIA1-220ENST00000532024 SPOUT1Q5T280 376 aaKnown RBP12.91□□□□□ -0.34
PPFIA1-220ENST00000532024 CCDC183Q5T5S1 534 aa12.91□□□□□ -0.34
PPFIA1-220ENST00000532024 PPP2R2DQ66LE6 453 aa12.91□□□□□ -0.34
PPFIA1-220ENST00000532024 FAM109BQ6ICB4 259 aaPredicted RBP12.91□□□□□ -0.34
PPFIA1-220ENST00000532024 ERCC4Q92889 916 aaPredicted RBP12.91□□□□□ -0.34
PPFIA1-220ENST00000532024 LPPQ93052 612 aa12.91□□□□□ -0.34
PPFIA1-220ENST00000532024 ZBTB45Q96K62 511 aaPredicted RBP12.91□□□□□ -0.34
PPFIA1-220ENST00000532024 SAMD11Q96NU1 681 aa12.91□□□□□ -0.34
PPFIA1-220ENST00000532024 TSG101Q99816 390 aa12.91□□□□□ -0.34
PPFIA1-220ENST00000532024 PBX4Q9BYU1 374 aa12.91□□□□□ -0.34
PPFIA1-220ENST00000532024 AAASQ9NRG9 546 aa12.91□□□□□ -0.34
PPFIA1-220ENST00000532024 SNTG2Q9NY99 539 aa12.91□□□□□ -0.34
PPFIA1-220ENST00000532024 DACH1Q9UI36 760 aa12.91□□□□□ -0.34
PPFIA1-220ENST00000532024 MAN1B1Q9UKM7 699 aa12.91□□□□□ -0.34
PPFIA1-220ENST00000532024 GDAQ9Y2T3 454 aa12.91□□□□□ -0.34
PPFIA1-220ENST00000532024 HES2Q9Y543 173 aa12.91□□□□□ -0.34
PPFIA1-220ENST00000532024 PTPRSQ13332 1948 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms