RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 TTC38Q5R3I4 469 aa18.63■□□□□ 0.57
CPSF1-207ENST00000531727 TMC5Q6UXY8 1006 aa18.63■□□□□ 0.57
CPSF1-207ENST00000531727 TAS1R1Q7RTX1 841 aa18.63■□□□□ 0.57
CPSF1-207ENST00000531727 GPR149Q86SP6 731 aa18.63■□□□□ 0.57
CPSF1-207ENST00000531727 NOSTRINQ8IVI9 506 aa18.63■□□□□ 0.57
CPSF1-207ENST00000531727 ZBTB8OSQ8IWT0 167 aa18.63■□□□□ 0.57
CPSF1-207ENST00000531727 TDRD5Q8NAT2 981 aaKnown RBP18.63■□□□□ 0.57
CPSF1-207ENST00000531727 FAM184AQ8NB25 1140 aa18.63■□□□□ 0.57
CPSF1-207ENST00000531727 KREMEN2Q8NCW0 462 aa18.63■□□□□ 0.57
CPSF1-207ENST00000531727 GSTCDQ8NEC7 633 aa18.63■□□□□ 0.57
CPSF1-207ENST00000531727 KIF2CQ99661 725 aa18.63■□□□□ 0.57
CPSF1-207ENST00000531727 SORCS3Q9UPU3 1222 aa18.63■□□□□ 0.57
CPSF1-207ENST00000531727 USTQ9Y2C2 406 aa18.63■□□□□ 0.57
CPSF1-207ENST00000531727 PLXNA3P51805 1871 aa18.63■□□□□ 0.57
CPSF1-207ENST00000531727 ARHGEF35A5YM69 484 aa18.62■□□□□ 0.57
CPSF1-207ENST00000531727 SPDYE4A6NLX3 237 aa18.62■□□□□ 0.57
CPSF1-207ENST00000531727 MUTP22033 750 aa18.62■□□□□ 0.57
CPSF1-207ENST00000531727 TRAPPC10P48553 1259 aa18.62■□□□□ 0.57
CPSF1-207ENST00000531727 GLUD2P49448 558 aa18.62■□□□□ 0.57
CPSF1-207ENST00000531727 GRIK3Q13003 919 aa18.62■□□□□ 0.57
CPSF1-207ENST00000531727 GNL2Q13823 731 aaKnown RBP18.62■□□□□ 0.57
CPSF1-207ENST00000531727 HAUS3Q68CZ6 603 aa18.62■□□□□ 0.57
CPSF1-207ENST00000531727 PADI6Q6TGC4 694 aa18.62■□□□□ 0.57
CPSF1-207ENST00000531727 UBALD2Q8IYN6 164 aa18.62■□□□□ 0.57
CPSF1-207ENST00000531727 ZDHHC14Q8IZN3 488 aa18.62■□□□□ 0.57
CPSF1-207ENST00000531727 FEZF2Q8TBJ5 459 aa18.62■□□□□ 0.57
CPSF1-207ENST00000531727 COLEC11Q9BWP8 271 aa18.62■□□□□ 0.57
CPSF1-207ENST00000531727 C2orf40Q9H1Z8 148 aa18.62■□□□□ 0.57
CPSF1-207ENST00000531727 FZD8Q9H461 694 aa18.62■□□□□ 0.57
CPSF1-207ENST00000531727 MUC6Q6W4X9 2439 aa18.61■□□□□ 0.57
CPSF1-207ENST00000531727 C2orf16Q68DN1 1984 aa18.61■□□□□ 0.57
CPSF1-207ENST00000531727 F8W810 466 aa18.61■□□□□ 0.57
CPSF1-207ENST00000531727 ADH1AP07327 375 aa18.61■□□□□ 0.57
CPSF1-207ENST00000531727 CYP11B2P19099 503 aa18.61■□□□□ 0.57
CPSF1-207ENST00000531727 FXR2P51116 673 aaKnown RBP eCLIP18.61■□□□□ 0.572e-6■■■□□ 15.4
CPSF1-207ENST00000531727 DSG1Q02413 1049 aa18.61■□□□□ 0.57
CPSF1-207ENST00000531727 MTMR3Q13615 1198 aa18.61■□□□□ 0.57
CPSF1-207ENST00000531727 KIAA0319Q5VV43 1072 aa18.61■□□□□ 0.57
CPSF1-207ENST00000531727 PLCD3Q8N3E9 789 aa18.61■□□□□ 0.57
CPSF1-207ENST00000531727 C4orf32Q8N8J7 132 aa18.61■□□□□ 0.57
CPSF1-207ENST00000531727 BSNDQ8WZ55 320 aa18.61■□□□□ 0.57
CPSF1-207ENST00000531727 RXFP1Q9HBX9 757 aa18.61■□□□□ 0.57
CPSF1-207ENST00000531727 KLK14Q9P0G3 267 aa18.61■□□□□ 0.57
CPSF1-207ENST00000531727 PARP2Q9UGN5 583 aa18.61■□□□□ 0.57
CPSF1-207ENST00000531727 NOL7Q9UMY1 257 aaKnown RBP18.61■□□□□ 0.57
CPSF1-207ENST00000531727 N4BP3O15049 544 aa18.6■□□□□ 0.57
CPSF1-207ENST00000531727 TEX28O15482 410 aa18.6■□□□□ 0.57
CPSF1-207ENST00000531727 NAMPTP43490 491 aa18.6■□□□□ 0.57
CPSF1-207ENST00000531727 IER5LQ5T953 404 aa18.6■□□□□ 0.57
CPSF1-207ENST00000531727 C15orf39Q6ZRI6 1047 aa18.6■□□□□ 0.57
CPSF1-207ENST00000531727 ALYREFQ86V81 257 aaKnown RBP18.6■□□□□ 0.57
CPSF1-207ENST00000531727 PRSS33Q8NF86 280 aa18.6■□□□□ 0.57
CPSF1-207ENST00000531727 PRRX2Q99811 253 aa18.6■□□□□ 0.57
CPSF1-207ENST00000531727 PDZD7Q9H5P4 517 aa18.6■□□□□ 0.57
CPSF1-207ENST00000531727 MAN1C1Q9NR34 630 aa18.6■□□□□ 0.57
CPSF1-207ENST00000531727 CHST7Q9NS84 486 aa18.6■□□□□ 0.57
CPSF1-207ENST00000531727 TTLL13PA6NNM8 815 aa18.59■□□□□ 0.57
CPSF1-207ENST00000531727 BRD1O95696 1058 aa18.59■□□□□ 0.57
CPSF1-207ENST00000531727 PRKCBP05771 671 aa18.59■□□□□ 0.57
CPSF1-207ENST00000531727 U2AF2P26368 475 aaKnown RBP eCLIP18.59■□□□□ 0.57
CPSF1-207ENST00000531727 CCT6AP40227 531 aaKnown RBP18.59■□□□□ 0.57
CPSF1-207ENST00000531727 PRPF4BQ13523 1007 aaKnown RBP18.59■□□□□ 0.57
CPSF1-207ENST00000531727 NBR1Q14596 966 aa18.59■□□□□ 0.57
CPSF1-207ENST00000531727 PPP2R5AQ15172 486 aa18.59■□□□□ 0.57
CPSF1-207ENST00000531727 ECM1Q16610 540 aa18.59■□□□□ 0.57
CPSF1-207ENST00000531727 MAPK6Q16659 721 aa18.59■□□□□ 0.57
CPSF1-207ENST00000531727 C8orf34Q49A92 452 aa18.59■□□□□ 0.57
CPSF1-207ENST00000531727 FUT10Q6P4F1 479 aa18.59■□□□□ 0.57
CPSF1-207ENST00000531727 CCDC149Q6ZUS6 474 aa18.59■□□□□ 0.57
CPSF1-207ENST00000531727 CMASQ8NFW8 434 aaPredicted RBP18.59■□□□□ 0.57
CPSF1-207ENST00000531727 DEPTORQ8TB45 409 aa18.59■□□□□ 0.57
CPSF1-207ENST00000531727 ACSF2Q96CM8 615 aaPredicted RBP18.59■□□□□ 0.57
CPSF1-207ENST00000531727 CCDC113Q9H0I3 377 aa18.59■□□□□ 0.57
CPSF1-207ENST00000531727 LRWD1Q9UFC0 647 aa18.59■□□□□ 0.57
CPSF1-207ENST00000531727 DPP7Q9UHL4 492 aa18.59■□□□□ 0.57
CPSF1-207ENST00000531727 ADAM28Q9UKQ2 775 aa18.59■□□□□ 0.57
CPSF1-207ENST00000531727 GLUD1P00367 558 aa18.58■□□□□ 0.56
CPSF1-207ENST00000531727 ASGR2P07307 311 aa18.58■□□□□ 0.56
CPSF1-207ENST00000531727 VCPP55072 806 aaKnown RBP18.58■□□□□ 0.56
CPSF1-207ENST00000531727 TMEM132AQ24JP5 1023 aa18.58■□□□□ 0.56
CPSF1-207ENST00000531727 USP41Q3LFD5 358 aa18.58■□□□□ 0.56
CPSF1-207ENST00000531727 ELMSAN1Q6PJG2 1045 aa18.58■□□□□ 0.56
CPSF1-207ENST00000531727 GPR65Q8IYL9 337 aa18.58■□□□□ 0.56
CPSF1-207ENST00000531727 GPR62Q9BZJ7 368 aa18.58■□□□□ 0.56
CPSF1-207ENST00000531727 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.58■□□□□ 0.56
CPSF1-207ENST00000531727 LIMD1Q9UGP4 676 aa18.58■□□□□ 0.56
CPSF1-207ENST00000531727 ACKR2O00590 384 aa18.57■□□□□ 0.56
CPSF1-207ENST00000531727 TADA2AO75478 443 aa18.57■□□□□ 0.56
CPSF1-207ENST00000531727 C1RP00736 705 aa18.57■□□□□ 0.56
CPSF1-207ENST00000531727 PDGFBP01127 241 aaPredicted RBP18.57■□□□□ 0.56
CPSF1-207ENST00000531727 MRE11P49959 708 aa18.57■□□□□ 0.56
CPSF1-207ENST00000531727 TOB1P50616 345 aaPredicted RBP18.57■□□□□ 0.56
CPSF1-207ENST00000531727 PTPN5P54829 565 aa18.57■□□□□ 0.56
CPSF1-207ENST00000531727 PDIA5Q14554 519 aa18.57■□□□□ 0.56
CPSF1-207ENST00000531727 HSP90AA2PQ14568 343 aaPredicted RBP18.57■□□□□ 0.56
CPSF1-207ENST00000531727 CYP26C1Q6V0L0 522 aa18.57■□□□□ 0.56
CPSF1-207ENST00000531727 OTOP3Q7RTS5 596 aa18.57■□□□□ 0.56
CPSF1-207ENST00000531727 IGSF22Q8N9C0 903 aa18.57■□□□□ 0.56
CPSF1-207ENST00000531727 HDAC7Q8WUI4 952 aa18.57■□□□□ 0.56
CPSF1-207ENST00000531727 RABGGTAQ92696 567 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms