RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 OXSMQ9NWU1 459 aa5.67□□□□□ -1.5
USP47-211ENST00000531513 OBP2AQ9NY56 170 aa5.67□□□□□ -1.5
USP47-211ENST00000531513 PNMA8BQ9ULN7 279 aaPredicted RBP5.67□□□□□ -1.5
USP47-211ENST00000531513 CFBP00751 764 aa5.66□□□□□ -1.5
USP47-211ENST00000531513 RBP3P10745 1247 aa5.66□□□□□ -1.5
USP47-211ENST00000531513 KIF11P52732 1056 aa5.66□□□□□ -1.5
USP47-211ENST00000531513 SMAD3P84022 425 aaKnown RBP5.66□□□□□ -1.5
USP47-211ENST00000531513 ROM1Q03395 351 aa5.66□□□□□ -1.5
USP47-211ENST00000531513 HNRNPA0Q13151 305 aaKnown RBP5.66□□□□□ -1.5
USP47-211ENST00000531513 DGKDQ16760 1214 aa5.66□□□□□ -1.5
USP47-211ENST00000531513 GAGE13Q4V321 117 aa5.66□□□□□ -1.5
USP47-211ENST00000531513 TMEM240Q5SV17 173 aa5.66□□□□□ -1.5
USP47-211ENST00000531513 FKBP15Q5T1M5 1219 aa5.66□□□□□ -1.5
USP47-211ENST00000531513 CREB3L3Q68CJ9 461 aa5.66□□□□□ -1.5
USP47-211ENST00000531513 CLEC14AQ86T13 490 aa5.66□□□□□ -1.5
USP47-211ENST00000531513 EFHBQ8N7U6 833 aa5.66□□□□□ -1.5
USP47-211ENST00000531513 C1orf162Q8NEQ5 155 aaPredicted RBP5.66□□□□□ -1.5
USP47-211ENST00000531513 VOPP1Q96AW1 172 aa5.66□□□□□ -1.5
USP47-211ENST00000531513 PGBD4Q96DM1 585 aa5.66□□□□□ -1.5
USP47-211ENST00000531513 MPHOSPH6Q99547 160 aaKnown RBP5.66□□□□□ -1.5
USP47-211ENST00000531513 ACSS2Q9NR19 701 aa5.66□□□□□ -1.5
USP47-211ENST00000531513 H2AFY2Q9P0M6 372 aaPredicted RBP5.66□□□□□ -1.5
USP47-211ENST00000531513 XDHP47989 1333 aa5.66□□□□□ -1.5
USP47-211ENST00000531513 WASHC2AQ641Q2 1341 aa5.66□□□□□ -1.5
USP47-211ENST00000531513 VSTM5A8MXK1 200 aa5.65□□□□□ -1.5
USP47-211ENST00000531513 TGM5O43548 720 aa5.65□□□□□ -1.5
USP47-211ENST00000531513 KRT37O76014 449 aa5.65□□□□□ -1.5
USP47-211ENST00000531513 TOX4O94842 621 aa5.65□□□□□ -1.5
USP47-211ENST00000531513 PF4V1P10720 104 aa5.65□□□□□ -1.5
USP47-211ENST00000531513 PROZP22891 400 aa5.65□□□□□ -1.5
USP47-211ENST00000531513 KRT85P78386 507 aa5.65□□□□□ -1.5
USP47-211ENST00000531513 BRD3Q15059 726 aa5.65□□□□□ -1.5
USP47-211ENST00000531513 VPS72Q15906 364 aa5.65□□□□□ -1.5
USP47-211ENST00000531513 DDB1Q16531 1140 aa5.65□□□□□ -1.5
USP47-211ENST00000531513 MINDY4Q4G0A6 757 aa5.65□□□□□ -1.5
USP47-211ENST00000531513 RABL3Q5HYI8 236 aa5.65□□□□□ -1.5
USP47-211ENST00000531513 BROXQ5VW32 411 aa5.65□□□□□ -1.5
USP47-211ENST00000531513 C1QL3Q5VWW1 255 aa5.65□□□□□ -1.5
USP47-211ENST00000531513 SLFN12LQ6IEE8 588 aa5.65□□□□□ -1.5
USP47-211ENST00000531513 PGM2L1Q6PCE3 622 aa5.65□□□□□ -1.5
USP47-211ENST00000531513 TSHZ1Q6ZSZ6 1077 aa5.65□□□□□ -1.5
USP47-211ENST00000531513 HTR3DQ70Z44 454 aa5.65□□□□□ -1.5
USP47-211ENST00000531513 ELOA2Q8IYF1 753 aaPredicted RBP5.65□□□□□ -1.5
USP47-211ENST00000531513 MB21D1Q8N884 522 aa5.65□□□□□ -1.5
USP47-211ENST00000531513 SVIPQ8NHG7 77 aa5.65□□□□□ -1.5
USP47-211ENST00000531513 FBXO41Q8TF61 875 aa5.65□□□□□ -1.5
USP47-211ENST00000531513 HAS1Q92839 578 aa5.65□□□□□ -1.5
USP47-211ENST00000531513 E2F7Q96AV8 911 aa5.65□□□□□ -1.5
USP47-211ENST00000531513 C16orf92Q96LL3 132 aa5.65□□□□□ -1.5
USP47-211ENST00000531513 C14orf119Q9NWQ9 140 aa5.65□□□□□ -1.5
USP47-211ENST00000531513 TRPS1Q9UHF7 1281 aa5.65□□□□□ -1.5
USP47-211ENST00000531513 RCAN3Q9UKA8 241 aa5.65□□□□□ -1.5
USP47-211ENST00000531513 PCSK5Q92824 1860 aa5.64□□□□□ -1.51
USP47-211ENST00000531513 LDHAP00338 332 aaKnown RBP5.64□□□□□ -1.51
USP47-211ENST00000531513 CYP17A1P05093 508 aa5.64□□□□□ -1.51
USP47-211ENST00000531513 VSIG10L2P0DP72 767 aa5.64□□□□□ -1.51
USP47-211ENST00000531513 CYP2C19P33261 490 aa5.64□□□□□ -1.51
USP47-211ENST00000531513 ADRA1BP35368 520 aa5.64□□□□□ -1.51
USP47-211ENST00000531513 GTF2H3Q13889 308 aa5.64□□□□□ -1.51
USP47-211ENST00000531513 MBNL2Q5VZF2 373 aaKnown RBP5.64□□□□□ -1.51
USP47-211ENST00000531513 KRT40Q6A162 431 aa5.64□□□□□ -1.51
USP47-211ENST00000531513 RHOUQ7L0Q8 258 aa5.64□□□□□ -1.51
USP47-211ENST00000531513 PNMA8AQ86V59 439 aaPredicted RBP5.64□□□□□ -1.51
USP47-211ENST00000531513 RASSF3Q86WH2 238 aa5.64□□□□□ -1.51
USP47-211ENST00000531513 VRK3Q8IV63 474 aa5.64□□□□□ -1.51
USP47-211ENST00000531513 ZNF276Q8N554 614 aa5.64□□□□□ -1.51
USP47-211ENST00000531513 KIAA1958Q8N8K9 716 aa5.64□□□□□ -1.51
USP47-211ENST00000531513 PLA2G15Q8NCC3 412 aa5.64□□□□□ -1.51
USP47-211ENST00000531513 GPR150Q8NGU9 434 aa5.64□□□□□ -1.51
USP47-211ENST00000531513 ATXN2LQ8WWM7 1075 aaKnown RBP5.64□□□□□ -1.51
USP47-211ENST00000531513 LENG9Q96B70 501 aa5.64□□□□□ -1.51
USP47-211ENST00000531513 MAML3Q96JK9 1138 aa5.64□□□□□ -1.51
USP47-211ENST00000531513 MLST8Q9BVC4 326 aa5.64□□□□□ -1.51
USP47-211ENST00000531513 PRDM11Q9NQV5 511 aa5.64□□□□□ -1.51
USP47-211ENST00000531513 POLR3BQ9NW08 1133 aaPredicted RBP5.64□□□□□ -1.51
USP47-211ENST00000531513 UBA6A0AVT1 1052 aaPredicted RBP5.63□□□□□ -1.51
USP47-211ENST00000531513 TRIM75PA6NK02 468 aa5.63□□□□□ -1.51
USP47-211ENST00000531513 GRXCR1A8MXD5 290 aa5.63□□□□□ -1.51
USP47-211ENST00000531513 H7C1D1 291 aa5.63□□□□□ -1.51
USP47-211ENST00000531513 GCP02774 474 aa5.63□□□□□ -1.51
USP47-211ENST00000531513 TRIM27P14373 513 aa5.63□□□□□ -1.51
USP47-211ENST00000531513 VCAM1P19320 739 aa5.63□□□□□ -1.51
USP47-211ENST00000531513 LPOP22079 712 aaPredicted RBP5.63□□□□□ -1.51
USP47-211ENST00000531513 ODF1Q14990 250 aa5.63□□□□□ -1.51
USP47-211ENST00000531513 EPHA7Q15375 998 aa5.63□□□□□ -1.51
USP47-211ENST00000531513 TERF2Q15554 542 aa5.63□□□□□ -1.51
USP47-211ENST00000531513 LONRF3Q496Y0 759 aa5.63□□□□□ -1.51
USP47-211ENST00000531513 DYDC2Q96IM9 177 aa5.63□□□□□ -1.51
USP47-211ENST00000531513 WDR92Q96MX6 357 aa5.63□□□□□ -1.51
USP47-211ENST00000531513 MNTQ99583 582 aa5.63□□□□□ -1.51
USP47-211ENST00000531513 MKS1Q9NXB0 559 aa5.63□□□□□ -1.51
USP47-211ENST00000531513 KCMF1Q9P0J7 381 aa5.63□□□□□ -1.51
USP47-211ENST00000531513 DNAI1Q9UI46 699 aa5.63□□□□□ -1.51
USP47-211ENST00000531513 ZBTB21Q9ULJ3 1066 aa5.63□□□□□ -1.51
USP47-211ENST00000531513 SPO11Q9Y5K1 396 aa5.63□□□□□ -1.51
USP47-211ENST00000531513 MRFAP1Q9Y605 127 aa5.63□□□□□ -1.51
USP47-211ENST00000531513 CREB3O43889 395 aa5.62□□□□□ -1.51
USP47-211ENST00000531513 PCDHGA12O60330 932 aa5.62□□□□□ -1.51
USP47-211ENST00000531513 NR4A1P22736 598 aa5.62□□□□□ -1.51
USP47-211ENST00000531513 PTX3P26022 381 aaPredicted RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms