RNA–Protein interactions for RNA: ENST00000529372.5

PSMD13-209, Transcript of proteasome 26S subunit, non-ATPase 13, human

TSL 5

Gene PSMD13, Length 612 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD13-209	ENST00000529372	ING5	Q8WYH8	240 aa		13.29	□□□□□ -0.28
PSMD13-209	ENST00000529372	FAM3C	Q92520	227 aa		13.29	□□□□□ -0.28
PSMD13-209	ENST00000529372	SPZ1	Q9BXG8	430 aa		13.29	□□□□□ -0.28
PSMD13-209	ENST00000529372	GPR62	Q9BZJ7	368 aa		13.29	□□□□□ -0.28
PSMD13-209	ENST00000529372	KCNH3	Q9ULD8	1083 aa		13.29	□□□□□ -0.28
PSMD13-209	ENST00000529372	PCDHGA5	Q9Y5G8	931 aa		13.29	□□□□□ -0.28
PSMD13-209	ENST00000529372	CCL16	O15467	120 aa		13.28	□□□□□ -0.28
PSMD13-209	ENST00000529372	POU2F2	P09086	479 aa		13.28	□□□□□ -0.28
PSMD13-209	ENST00000529372	RAB27A	P51159	221 aa		13.28	□□□□□ -0.28
PSMD13-209	ENST00000529372	SLC5A9	Q2M3M2	681 aa		13.28	□□□□□ -0.28
PSMD13-209	ENST00000529372	CEP55	Q53EZ4	464 aa		13.28	□□□□□ -0.28
PSMD13-209	ENST00000529372	TRMT1L	Q7Z2T5	733 aa	Known RBP	13.28	□□□□□ -0.28
PSMD13-209	ENST00000529372	TICAM2	Q86XR7	235 aa		13.28	□□□□□ -0.28
PSMD13-209	ENST00000529372	URGCP	Q8TCY9	931 aa		13.28	□□□□□ -0.28
PSMD13-209	ENST00000529372	ELSPBP1	Q96BH3	223 aa		13.28	□□□□□ -0.28
PSMD13-209	ENST00000529372	EDEM2	Q9BV94	578 aa		13.28	□□□□□ -0.28
PSMD13-209	ENST00000529372	KRT23	Q9C075	422 aa		13.28	□□□□□ -0.28
PSMD13-209	ENST00000529372	RSAD1	Q9HA92	442 aa		13.28	□□□□□ -0.28
PSMD13-209	ENST00000529372	TRPV5	Q9NQA5	729 aa		13.28	□□□□□ -0.28
PSMD13-209	ENST00000529372	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	13.28	□□□□□ -0.28
PSMD13-209	ENST00000529372	VPS45	Q9NRW7	570 aa		13.28	□□□□□ -0.28
PSMD13-209	ENST00000529372	RBM12	Q9NTZ6	932 aa	Known RBP	13.28	□□□□□ -0.28
PSMD13-209	ENST00000529372	DNMT3B	Q9UBC3	853 aa	Known RBP	13.28	□□□□□ -0.28
PSMD13-209	ENST00000529372	PIN4	Q9Y237	131 aa	Known RBP	13.28	□□□□□ -0.28
PSMD13-209	ENST00000529372	PCDHB2	Q9Y5E7	798 aa		13.28	□□□□□ -0.28
PSMD13-209	ENST00000529372	EML5	Q05BV3	1969 aa		13.28	□□□□□ -0.28
PSMD13-209	ENST00000529372	SPDYE3	A6NKU9	549 aa		13.27	□□□□□ -0.29
PSMD13-209	ENST00000529372	ZNF862	O60290	1169 aa		13.27	□□□□□ -0.29
PSMD13-209	ENST00000529372	C8A	P07357	584 aa		13.27	□□□□□ -0.29
PSMD13-209	ENST00000529372	TMOD1	P28289	359 aa		13.27	□□□□□ -0.29
PSMD13-209	ENST00000529372	GRM2	Q14416	872 aa		13.27	□□□□□ -0.29
PSMD13-209	ENST00000529372	UBXN11	Q5T124	520 aa		13.27	□□□□□ -0.29
PSMD13-209	ENST00000529372	MIS18BP1	Q6P0N0	1132 aa		13.27	□□□□□ -0.29
PSMD13-209	ENST00000529372	CACNA2D4	Q7Z3S7	1137 aa		13.27	□□□□□ -0.29
PSMD13-209	ENST00000529372	GAB3	Q8WWW8	586 aa		13.27	□□□□□ -0.29
PSMD13-209	ENST00000529372	NLRP7	Q8WX94	980 aa		13.27	□□□□□ -0.29
PSMD13-209	ENST00000529372	KANSL3	Q9P2N6	904 aa		13.27	□□□□□ -0.29
PSMD13-209	ENST00000529372	CEP131	Q9UPN4	1083 aa		13.27	□□□□□ -0.29
PSMD13-209	ENST00000529372	PIAS3	Q9Y6X2	628 aa		13.27	□□□□□ -0.29
PSMD13-209	ENST00000529372	LNP1	A1A4G5	178 aa		13.26	□□□□□ -0.29
PSMD13-209	ENST00000529372	FAM221B	A6H8Z2	402 aa		13.26	□□□□□ -0.29
PSMD13-209	ENST00000529372	ARNTL	O00327	626 aa		13.26	□□□□□ -0.29
PSMD13-209	ENST00000529372	KIF5B	P33176	963 aa		13.26	□□□□□ -0.29
PSMD13-209	ENST00000529372	OR1G1	P47890	313 aa		13.26	□□□□□ -0.29
PSMD13-209	ENST00000529372	CKAP2L	Q8IYA6	745 aa		13.26	□□□□□ -0.29
PSMD13-209	ENST00000529372	GLIS3	Q8NEA6	775 aa		13.26	□□□□□ -0.29
PSMD13-209	ENST00000529372	PGBD4	Q96DM1	585 aa		13.26	□□□□□ -0.29
PSMD13-209	ENST00000529372	MCRS1	Q96EZ8	462 aa		13.26	□□□□□ -0.29
PSMD13-209	ENST00000529372	ZC3H10	Q96K80	434 aa	Known RBP	13.26	□□□□□ -0.29
PSMD13-209	ENST00000529372	CLSTN3	Q9BQT9	956 aa		13.26	□□□□□ -0.29
PSMD13-209	ENST00000529372	GCOM2	Q9BZD3	368 aa	Predicted RBP	13.26	□□□□□ -0.29
PSMD13-209	ENST00000529372	CNNM2	Q9H8M5	875 aa		13.26	□□□□□ -0.29
PSMD13-209	ENST00000529372	ZNF334	Q9HCZ1	680 aa	Predicted RBP	13.26	□□□□□ -0.29
PSMD13-209	ENST00000529372	GDE1	Q9NZC3	331 aa		13.26	□□□□□ -0.29
PSMD13-209	ENST00000529372	PIEZO2	Q9H5I5	2752 aa		13.25	□□□□□ -0.29
PSMD13-209	ENST00000529372	NCAN	O14594	1321 aa		13.25	□□□□□ -0.29
PSMD13-209	ENST00000529372	CNTNAP2	Q9UHC6	1331 aa		13.25	□□□□□ -0.29
PSMD13-209	ENST00000529372		A0A087WZ62	844 aa		13.25	□□□□□ -0.29
PSMD13-209	ENST00000529372	ADAM12	O43184	909 aa		13.25	□□□□□ -0.29
PSMD13-209	ENST00000529372	SFPQ	P23246	707 aa	Known RBP eCLIP	13.25	□□□□□ -0.29
PSMD13-209	ENST00000529372	PABPC1L	Q4VXU2	614 aa	Known RBP	13.25	□□□□□ -0.29
PSMD13-209	ENST00000529372	RTP2	Q5QGT7	225 aa		13.25	□□□□□ -0.29
PSMD13-209	ENST00000529372	PPM1L	Q5SGD2	360 aa		13.25	□□□□□ -0.29
PSMD13-209	ENST00000529372	FUT10	Q6P4F1	479 aa		13.25	□□□□□ -0.29
PSMD13-209	ENST00000529372	PRSS55	Q6UWB4	352 aa	Predicted RBP	13.25	□□□□□ -0.29
PSMD13-209	ENST00000529372	RRP36	Q96EU6	259 aa	Known RBP	13.25	□□□□□ -0.29
PSMD13-209	ENST00000529372	PGBD1	Q96JS3	809 aa		13.25	□□□□□ -0.29
PSMD13-209	ENST00000529372	SCLT1	Q96NL6	688 aa		13.25	□□□□□ -0.29
PSMD13-209	ENST00000529372	FAM193B	Q96PV7	902 aa	Predicted RBP	13.25	□□□□□ -0.29
PSMD13-209	ENST00000529372	CEP89	Q96ST8	783 aa		13.25	□□□□□ -0.29
PSMD13-209	ENST00000529372	FDXACB1	Q9BRP7	624 aa	Predicted RBP	13.25	□□□□□ -0.29
PSMD13-209	ENST00000529372	CHMP4B	Q9H444	224 aa	Known RBP	13.25	□□□□□ -0.29
PSMD13-209	ENST00000529372	BRD9	Q9H8M2	597 aa		13.25	□□□□□ -0.29
PSMD13-209	ENST00000529372	MIOS	Q9NXC5	875 aa		13.25	□□□□□ -0.29
PSMD13-209	ENST00000529372	FAM86B1	E9PN63	330 aa		13.24	□□□□□ -0.29
PSMD13-209	ENST00000529372	CDX4	O14627	284 aa	Predicted RBP	13.24	□□□□□ -0.29
PSMD13-209	ENST00000529372	XYLB	O75191	536 aa		13.24	□□□□□ -0.29
PSMD13-209	ENST00000529372	RPP40	O75818	363 aa	Known RBP	13.24	□□□□□ -0.29
PSMD13-209	ENST00000529372	C1QL1	O75973	258 aa		13.24	□□□□□ -0.29
PSMD13-209	ENST00000529372	FAM86B2	P0C5J1	330 aa		13.24	□□□□□ -0.29
PSMD13-209	ENST00000529372	CEBPB	P17676	345 aa		13.24	□□□□□ -0.29
PSMD13-209	ENST00000529372	CCNE1	P24864	410 aa		13.24	□□□□□ -0.29
PSMD13-209	ENST00000529372	TARBP2	Q15633	366 aa	Known RBP	13.24	□□□□□ -0.29
PSMD13-209	ENST00000529372	USP41	Q3LFD5	358 aa		13.24	□□□□□ -0.29
PSMD13-209	ENST00000529372	FAM78A	Q5JUQ0	283 aa		13.24	□□□□□ -0.29
PSMD13-209	ENST00000529372	DAB2IP	Q5VWQ8	1189 aa		13.24	□□□□□ -0.29
PSMD13-209	ENST00000529372	AGPAT5	Q9NUQ2	364 aa		13.24	□□□□□ -0.29
PSMD13-209	ENST00000529372	GABBR1	Q9UBS5	961 aa		13.24	□□□□□ -0.29
PSMD13-209	ENST00000529372	POLI	Q9UNA4	740 aa		13.24	□□□□□ -0.29
PSMD13-209	ENST00000529372	URB1	O60287	2271 aa	Known RBP	13.23	□□□□□ -0.29
PSMD13-209	ENST00000529372	IGLV3-22	A0A075B6J6	115 aa		13.23	□□□□□ -0.29
PSMD13-209	ENST00000529372	IGKV6-21	A0A0C4DH24	114 aa		13.23	□□□□□ -0.29
PSMD13-209	ENST00000529372	SMARCA1	P28370	1054 aa		13.23	□□□□□ -0.29
PSMD13-209	ENST00000529372	HOXA11	P31270	313 aa	Predicted RBP	13.23	□□□□□ -0.29
PSMD13-209	ENST00000529372	PXN	P49023	591 aa	Predicted RBP	13.23	□□□□□ -0.29
PSMD13-209	ENST00000529372	PLK5	Q496M5	336 aa		13.23	□□□□□ -0.29
PSMD13-209	ENST00000529372	C20orf194	Q5TEA3	1177 aa		13.23	□□□□□ -0.29
PSMD13-209	ENST00000529372	LIN9	Q5TKA1	542 aa		13.23	□□□□□ -0.29
PSMD13-209	ENST00000529372	VIT	Q6UXI7	678 aa		13.23	□□□□□ -0.29
PSMD13-209	ENST00000529372	NIPA1	Q7RTP0	329 aa		13.23	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms