RNA–Protein interactions for RNA: ENST00000529265.5

BEST1-206, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,421 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-206ENST00000529265 PGBD4Q96DM1 585 aa15.2■□□□□ 0.02
BEST1-206ENST00000529265 RNPC3Q96LT9 517 aaKnown RBP15.2■□□□□ 0.02
BEST1-206ENST00000529265 TSG101Q99816 390 aa15.2■□□□□ 0.02
BEST1-206ENST00000529265 CDT1Q9H211 546 aa15.2■□□□□ 0.02
BEST1-206ENST00000529265 PCIF1Q9H4Z3 704 aa15.2■□□□□ 0.02
BEST1-206ENST00000529265 PTPRHQ9HD43 1115 aa15.2■□□□□ 0.02
BEST1-206ENST00000529265 TYW1Q9NV66 732 aaKnown RBP15.2■□□□□ 0.02
BEST1-206ENST00000529265 DACH1Q9UI36 760 aa15.2■□□□□ 0.02
BEST1-206ENST00000529265 IPPQ9Y573 584 aa15.2■□□□□ 0.02
BEST1-206ENST00000529265 TNRC18O15417 2968 aaPredicted RBP15.2■□□□□ 0.02
BEST1-206ENST00000529265 ZMYM2Q9UBW7 1377 aa15.2■□□□□ 0.02
BEST1-206ENST00000529265 PDXKO00764 312 aa15.19■□□□□ 0.02
BEST1-206ENST00000529265 TGFB1I1O43294 461 aa15.19■□□□□ 0.02
BEST1-206ENST00000529265 ITGA4P13612 1032 aa15.19■□□□□ 0.02
BEST1-206ENST00000529265 GARTP22102 1010 aa15.19■□□□□ 0.02
BEST1-206ENST00000529265 PROZP22891 400 aa15.19■□□□□ 0.02
BEST1-206ENST00000529265 OSTNP61366 133 aa15.19■□□□□ 0.02
BEST1-206ENST00000529265 SNRPFP62306 86 aaKnown RBP15.19■□□□□ 0.02
BEST1-206ENST00000529265 DEFB103AP81534 67 aa15.19■□□□□ 0.02
BEST1-206ENST00000529265 MCL1Q07820 350 aa15.19■□□□□ 0.02
BEST1-206ENST00000529265 C9orf50Q5SZB4 431 aa15.19■□□□□ 0.02
BEST1-206ENST00000529265 DHTKD1Q96HY7 919 aaPredicted RBP15.19■□□□□ 0.02
BEST1-206ENST00000529265 CCDC94Q9BW85 323 aaPredicted RBP15.19■□□□□ 0.02
BEST1-206ENST00000529265 TRAIPQ9BWF2 469 aa15.19■□□□□ 0.02
BEST1-206ENST00000529265 KCTD10Q9H3F6 313 aa15.19■□□□□ 0.02
BEST1-206ENST00000529265 AGPAT3Q9NRZ7 376 aa15.19■□□□□ 0.02
BEST1-206ENST00000529265 CXXC1Q9P0U4 656 aaPredicted RBP15.19■□□□□ 0.02
BEST1-206ENST00000529265 CGNQ9P2M7 1197 aaKnown RBP15.19■□□□□ 0.02
BEST1-206ENST00000529265 PARP2Q9UGN5 583 aa15.19■□□□□ 0.02
BEST1-206ENST00000529265 AGO2Q9UKV8 859 aaKnown RBP15.19■□□□□ 0.02
BEST1-206ENST00000529265 CTNND2Q9UQB3 1225 aa15.19■□□□□ 0.02
BEST1-206ENST00000529265 HES2Q9Y543 173 aa15.19■□□□□ 0.02
BEST1-206ENST00000529265 SYCE3A1L190 88 aa15.18■□□□□ 0.02
BEST1-206ENST00000529265 PPP1R3GB7ZBB8 358 aa15.18■□□□□ 0.02
BEST1-206ENST00000529265 ZNF623O75123 536 aa15.18■□□□□ 0.02
BEST1-206ENST00000529265 EOMESO95936 686 aa15.18■□□□□ 0.02
BEST1-206ENST00000529265 CD44P16070 742 aaKnown RBP15.18■□□□□ 0.02
BEST1-206ENST00000529265 CYP2J2P51589 502 aa15.18■□□□□ 0.02
BEST1-206ENST00000529265 STX1AQ16623 288 aa15.18■□□□□ 0.02
BEST1-206ENST00000529265 DPCR1Q3MIW9 517 aa15.18■□□□□ 0.02
BEST1-206ENST00000529265 FAM117BQ6P1L5 589 aa15.18■□□□□ 0.02
BEST1-206ENST00000529265 CHRDL2Q6WN34 429 aa15.18■□□□□ 0.02
BEST1-206ENST00000529265 NPAS4Q8IUM7 802 aa15.18■□□□□ 0.02
BEST1-206ENST00000529265 NELFBQ8WX92 580 aa15.18■□□□□ 0.02
BEST1-206ENST00000529265 LPPQ93052 612 aa15.18■□□□□ 0.02
BEST1-206ENST00000529265 P2RX5Q93086 422 aa15.18■□□□□ 0.02
BEST1-206ENST00000529265 CBWD1Q9BRT8 395 aa15.18■□□□□ 0.02
BEST1-206ENST00000529265 NXF3Q9H4D5 531 aaKnown RBP15.18■□□□□ 0.02
BEST1-206ENST00000529265 ANO10Q9NW15 660 aa15.18■□□□□ 0.02
BEST1-206ENST00000529265 TMEM161AQ9NX61 479 aa15.18■□□□□ 0.02
BEST1-206ENST00000529265 SNTG2Q9NY99 539 aa15.18■□□□□ 0.02
BEST1-206ENST00000529265 STYXL1Q9Y6J8 313 aa15.18■□□□□ 0.02
BEST1-206ENST00000529265 PTPRSQ13332 1948 aa15.18■□□□□ 0.02
BEST1-206ENST00000529265 A0A0B4J269 797 aa15.17■□□□□ 0.02
BEST1-206ENST00000529265 BICDL2A1A5D9 508 aa15.17■□□□□ 0.02
BEST1-206ENST00000529265 ABLIM1O14639 778 aa15.17■□□□□ 0.02
BEST1-206ENST00000529265 OGTO15294 1046 aa15.17■□□□□ 0.02
BEST1-206ENST00000529265 LDHAP00338 332 aaKnown RBP15.17■□□□□ 0.02
BEST1-206ENST00000529265 CCDC192P0DO97 292 aa15.17■□□□□ 0.02
BEST1-206ENST00000529265 AKAP5P24588 427 aa15.17■□□□□ 0.02
BEST1-206ENST00000529265 CCNE1P24864 410 aa15.17■□□□□ 0.02
BEST1-206ENST00000529265 ADSSP30520 456 aa15.17■□□□□ 0.02
BEST1-206ENST00000529265 BMP8BP34820 402 aa15.17■□□□□ 0.02
BEST1-206ENST00000529265 YARSP54577 528 aaKnown RBP15.17■□□□□ 0.02
BEST1-206ENST00000529265 STX17P56962 302 aa15.17■□□□□ 0.02
BEST1-206ENST00000529265 FAM189BP81408 668 aa15.17■□□□□ 0.02
BEST1-206ENST00000529265 PAK1Q13153 545 aa15.17■□□□□ 0.02
BEST1-206ENST00000529265 KYAT1Q16773 422 aa15.17■□□□□ 0.02
BEST1-206ENST00000529265 ZSCAN23Q3MJ62 389 aa15.17■□□□□ 0.02
BEST1-206ENST00000529265 SEZ6Q53EL9 994 aa15.17■□□□□ 0.02
BEST1-206ENST00000529265 ABI1Q8IZP0 508 aa15.17■□□□□ 0.02
BEST1-206ENST00000529265 CEP120Q8N960 986 aa15.17■□□□□ 0.02
BEST1-206ENST00000529265 SMG8Q8ND04 991 aaKnown RBP15.17■□□□□ 0.02
BEST1-206ENST00000529265 TOP1MTQ969P6 601 aa15.17■□□□□ 0.02
BEST1-206ENST00000529265 SAAL1Q96ER3 474 aa15.17■□□□□ 0.02
BEST1-206ENST00000529265 ACAP3Q96P50 834 aa15.17■□□□□ 0.02
BEST1-206ENST00000529265 SLC9A7Q96T83 725 aa15.17■□□□□ 0.02
BEST1-206ENST00000529265 ZBED2Q9BTP6 218 aa15.17■□□□□ 0.02
BEST1-206ENST00000529265 HAPLN2Q9GZV7 340 aa15.17■□□□□ 0.02
BEST1-206ENST00000529265 GZF1Q9H116 711 aaPredicted RBP15.17■□□□□ 0.02
BEST1-206ENST00000529265 SEMA6BQ9H3T3 888 aa15.17■□□□□ 0.02
BEST1-206ENST00000529265 ELAC1Q9H777 363 aaKnown RBP15.17■□□□□ 0.02
BEST1-206ENST00000529265 HSPBP1Q9NZL4 362 aa15.17■□□□□ 0.02
BEST1-206ENST00000529265 TRAF3IP3Q9Y228 551 aa15.17■□□□□ 0.02
BEST1-206ENST00000529265 TDRD15B5MCY1 1934 aaKnown RBP15.17■□□□□ 0.02
BEST1-206ENST00000529265 GOLGA8IPA6NC78 632 aa15.17■□□□□ 0.02
BEST1-206ENST00000529265 TRIM49BA6NDI0 452 aa15.17■□□□□ 0.02
BEST1-206ENST00000529265 GOLGA8JA6NMD2 632 aa15.17■□□□□ 0.02
BEST1-206ENST00000529265 KIAA0391O15091 583 aaKnown RBP15.17■□□□□ 0.02
BEST1-206ENST00000529265 EXOC3O60645 756 aa15.17■□□□□ 0.02
BEST1-206ENST00000529265 NR3C1P04150 777 aa15.17■□□□□ 0.02
BEST1-206ENST00000529265 ATP2A2P16615 1042 aaKnown RBP15.17■□□□□ 0.02
BEST1-206ENST00000529265 RPL13P26373 211 aaKnown RBP15.17■□□□□ 0.02
BEST1-206ENST00000529265 GRM5P41594 1212 aa15.17■□□□□ 0.02
BEST1-206ENST00000529265 ACOT2P49753 483 aa15.17■□□□□ 0.02
BEST1-206ENST00000529265 TYRO3Q06418 890 aa15.17■□□□□ 0.02
BEST1-206ENST00000529265 ANKRD40Q6AI12 368 aa15.17■□□□□ 0.02
BEST1-206ENST00000529265 CENPPQ6IPU0 288 aa15.17■□□□□ 0.02
BEST1-206ENST00000529265 TMCO2Q7Z6W1 182 aaPredicted RBP15.17■□□□□ 0.02
BEST1-206ENST00000529265 MRPL10Q7Z7H8 261 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms