RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 ERAP1Q9NZ08 941 aa9.55□□□□□ -0.88
SSBP3-212ENST00000528930 IGSF9Q9P2J2 1179 aa9.55□□□□□ -0.88
SSBP3-212ENST00000528930 ORC3Q9UBD5 711 aaPredicted RBP9.55□□□□□ -0.88
SSBP3-212ENST00000528930 CA14Q9ULX7 337 aa9.55□□□□□ -0.88
SSBP3-212ENST00000528930 LAMA5O15230 3695 aa9.55□□□□□ -0.88
SSBP3-212ENST00000528930 NRCAMQ92823 1304 aa9.55□□□□□ -0.88
SSBP3-212ENST00000528930 CYP3A7-CYP3A51PA0A087WV96 503 aa9.54□□□□□ -0.88
SSBP3-212ENST00000528930 FAM181BA6NEQ2 426 aa9.54□□□□□ -0.88
SSBP3-212ENST00000528930 DDX39AO00148 427 aaKnown RBP9.54□□□□□ -0.88
SSBP3-212ENST00000528930 MSH4O15457 936 aa9.54□□□□□ -0.88
SSBP3-212ENST00000528930 LAMTOR5O43504 91 aa9.54□□□□□ -0.88
SSBP3-212ENST00000528930 GNAT1P11488 350 aa9.54□□□□□ -0.88
SSBP3-212ENST00000528930 CYP3A7P24462 503 aa9.54□□□□□ -0.88
SSBP3-212ENST00000528930 MARK3P27448 753 aa9.54□□□□□ -0.88
SSBP3-212ENST00000528930 SH3BP2P78314 561 aa9.54□□□□□ -0.88
SSBP3-212ENST00000528930 SETQ01105 290 aaPredicted RBP9.54□□□□□ -0.88
SSBP3-212ENST00000528930 PLCB4Q15147 1175 aa9.54□□□□□ -0.88
SSBP3-212ENST00000528930 PRR16Q569H4 304 aa9.54□□□□□ -0.88
SSBP3-212ENST00000528930 MARCH8Q5T0T0 291 aa9.54□□□□□ -0.88
SSBP3-212ENST00000528930 LLGL2Q6P1M3 1020 aa9.54□□□□□ -0.88
SSBP3-212ENST00000528930 CCDC60Q8IWA6 550 aaPredicted RBP9.54□□□□□ -0.88
SSBP3-212ENST00000528930 MICAL1Q8TDZ2 1067 aa9.54□□□□□ -0.88
SSBP3-212ENST00000528930 GLG1Q92896 1179 aa9.54□□□□□ -0.88
SSBP3-212ENST00000528930 MBOAT7Q96N66 472 aa9.54□□□□□ -0.88
SSBP3-212ENST00000528930 ZNF577Q9BSK1 485 aa9.54□□□□□ -0.88
SSBP3-212ENST00000528930 C22orf23Q9BZE7 217 aa9.54□□□□□ -0.88
SSBP3-212ENST00000528930 TBC1D22BQ9NU19 505 aa9.54□□□□□ -0.88
SSBP3-212ENST00000528930 PTPN13Q12923 2485 aa9.54□□□□□ -0.88
SSBP3-212ENST00000528930 MBLAC1A4D2B0 266 aaPredicted RBP9.53□□□□□ -0.88
SSBP3-212ENST00000528930 JAK2O60674 1132 aa9.53□□□□□ -0.88
SSBP3-212ENST00000528930 LRRN2O75325 713 aa9.53□□□□□ -0.88
SSBP3-212ENST00000528930 TDP2O95551 362 aa9.53□□□□□ -0.88
SSBP3-212ENST00000528930 WEE2P0C1S8 567 aa9.53□□□□□ -0.88
SSBP3-212ENST00000528930 INSRRP14616 1297 aa9.53□□□□□ -0.88
SSBP3-212ENST00000528930 ATP4AP20648 1035 aa9.53□□□□□ -0.88
SSBP3-212ENST00000528930 STAT5BP51692 787 aa9.53□□□□□ -0.88
SSBP3-212ENST00000528930 CSTF1Q05048 431 aaKnown RBP9.53□□□□□ -0.88
SSBP3-212ENST00000528930 PPFIA1Q13136 1202 aa9.53□□□□□ -0.88
SSBP3-212ENST00000528930 GRIK4Q16099 956 aa9.53□□□□□ -0.88
SSBP3-212ENST00000528930 Q4G0T1 1027 aa9.53□□□□□ -0.88
SSBP3-212ENST00000528930 EARS2Q5JPH6 523 aaKnown RBP9.53□□□□□ -0.88
SSBP3-212ENST00000528930 ZNF746Q6NUN9 644 aaPredicted RBP9.53□□□□□ -0.88
SSBP3-212ENST00000528930 RUFY4Q6ZNE9 571 aa9.53□□□□□ -0.88
SSBP3-212ENST00000528930 SLC5A5Q92911 643 aa9.53□□□□□ -0.88
SSBP3-212ENST00000528930 GJA10Q969M2 543 aa9.53□□□□□ -0.88
SSBP3-212ENST00000528930 ACSF2Q96CM8 615 aaPredicted RBP9.53□□□□□ -0.88
SSBP3-212ENST00000528930 ZFP42Q96MM3 310 aa9.53□□□□□ -0.88
SSBP3-212ENST00000528930 AZI2Q9H6S1 392 aa9.53□□□□□ -0.88
SSBP3-212ENST00000528930 ARHGEF3Q9NR81 526 aa9.53□□□□□ -0.88
SSBP3-212ENST00000528930 DBR1Q9UK59 544 aaKnown RBP9.53□□□□□ -0.88
SSBP3-212ENST00000528930 LIMCH1Q9UPQ0 1083 aa9.53□□□□□ -0.88
SSBP3-212ENST00000528930 HCFC2Q9Y5Z7 792 aa9.53□□□□□ -0.88
SSBP3-212ENST00000528930 RRN3P2A6NIE6 340 aa9.52□□□□□ -0.89
SSBP3-212ENST00000528930 H3BM21 787 aa9.52□□□□□ -0.89
SSBP3-212ENST00000528930 PSMD10O75832 226 aa9.52□□□□□ -0.89
SSBP3-212ENST00000528930 SRFP11831 508 aa9.52□□□□□ -0.89
SSBP3-212ENST00000528930 PLA2G2AP14555 144 aa9.52□□□□□ -0.89
SSBP3-212ENST00000528930 XBP1P17861 261 aa9.52□□□□□ -0.89
SSBP3-212ENST00000528930 NCLP19338 710 aaKnown RBP9.52□□□□□ -0.89
SSBP3-212ENST00000528930 SPINK2P20155 84 aa9.52□□□□□ -0.89
SSBP3-212ENST00000528930 SLC26A2P50443 739 aa9.52□□□□□ -0.89
SSBP3-212ENST00000528930 NONOQ15233 471 aaKnown RBP eCLIP9.52□□□□□ -0.89
SSBP3-212ENST00000528930 INF2Q27J81 1249 aa9.52□□□□□ -0.89
SSBP3-212ENST00000528930 LINC01559Q495D7 138 aa9.52□□□□□ -0.89
SSBP3-212ENST00000528930 FAM26DQ5JW98 314 aa9.52□□□□□ -0.89
SSBP3-212ENST00000528930 SWSAP1Q6NVH7 229 aa9.52□□□□□ -0.89
SSBP3-212ENST00000528930 MOXD1Q6UVY6 613 aa9.52□□□□□ -0.89
SSBP3-212ENST00000528930 B3GNT9Q6UX72 402 aa9.52□□□□□ -0.89
SSBP3-212ENST00000528930 KRT25Q7Z3Z0 450 aa9.52□□□□□ -0.89
SSBP3-212ENST00000528930 WASF1Q92558 559 aa9.52□□□□□ -0.89
SSBP3-212ENST00000528930 TNFRSF25Q93038 417 aa9.52□□□□□ -0.89
SSBP3-212ENST00000528930 ZBTB10Q96DT7 871 aa9.52□□□□□ -0.89
SSBP3-212ENST00000528930 FAM126AQ9BYI3 521 aaPredicted RBP9.52□□□□□ -0.89
SSBP3-212ENST00000528930 FOXQ1Q9C009 403 aa9.52□□□□□ -0.89
SSBP3-212ENST00000528930 ZNF302Q9NR11 478 aa9.52□□□□□ -0.89
SSBP3-212ENST00000528930 PRMT8Q9NR22 394 aaPredicted RBP9.52□□□□□ -0.89
SSBP3-212ENST00000528930 SPATA6Q9NWH7 488 aaPredicted RBP9.52□□□□□ -0.89
SSBP3-212ENST00000528930 MAFBQ9Y5Q3 323 aaPredicted RBP9.52□□□□□ -0.89
SSBP3-212ENST00000528930 ANKRD17O75179 2603 aaKnown RBP9.52□□□□□ -0.89
SSBP3-212ENST00000528930 WDR81Q562E7 1941 aa9.51□□□□□ -0.89
SSBP3-212ENST00000528930 EIF4E1BA6NMX2 242 aaKnown RBP9.51□□□□□ -0.89
SSBP3-212ENST00000528930 HIDE1A8MVS5 230 aa9.51□□□□□ -0.89
SSBP3-212ENST00000528930 ZBTB42B2RXF5 422 aa9.51□□□□□ -0.89
SSBP3-212ENST00000528930 ENPP3O14638 875 aa9.51□□□□□ -0.89
SSBP3-212ENST00000528930 BACH1O14867 736 aa9.51□□□□□ -0.89
SSBP3-212ENST00000528930 FGF18O76093 207 aa9.51□□□□□ -0.89
SSBP3-212ENST00000528930 CHRNA1P02708 482 aa9.51□□□□□ -0.89
SSBP3-212ENST00000528930 CTSHP09668 335 aa9.51□□□□□ -0.89
SSBP3-212ENST00000528930 PRKCSHP14314 528 aaPredicted RBP9.51□□□□□ -0.89
SSBP3-212ENST00000528930 STARD6P59095 220 aa9.51□□□□□ -0.89
SSBP3-212ENST00000528930 IGBP1P78318 339 aa9.51□□□□□ -0.89
SSBP3-212ENST00000528930 KRT76Q01546 638 aa9.51□□□□□ -0.89
SSBP3-212ENST00000528930 MGAT3Q09327 533 aa9.51□□□□□ -0.89
SSBP3-212ENST00000528930 C19orf57Q0VDD7 668 aa9.51□□□□□ -0.89
SSBP3-212ENST00000528930 NR5A1Q13285 461 aa9.51□□□□□ -0.89
SSBP3-212ENST00000528930 COL28A1Q2UY09 1125 aa9.51□□□□□ -0.89
SSBP3-212ENST00000528930 PLPP4Q5VZY2 271 aa9.51□□□□□ -0.89
SSBP3-212ENST00000528930 MIS18BP1Q6P0N0 1132 aa9.51□□□□□ -0.89
SSBP3-212ENST00000528930 TAF2Q6P1X5 1199 aa9.51□□□□□ -0.89
SSBP3-212ENST00000528930 OTOP3Q7RTS5 596 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms