RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 LINC01565O15544 149 aa10.58□□□□□ -0.72
CHD7-208ENST00000528280 TBX10O75333 385 aa10.58□□□□□ -0.72
CHD7-208ENST00000528280 DDHD2O94830 711 aa10.58□□□□□ -0.72
CHD7-208ENST00000528280 NPTXRO95502 500 aa10.58□□□□□ -0.72
CHD7-208ENST00000528280 C1RP00736 705 aa10.58□□□□□ -0.72
CHD7-208ENST00000528280 PRKCBP05771 671 aa10.58□□□□□ -0.72
CHD7-208ENST00000528280 GUCY2CP25092 1073 aa10.58□□□□□ -0.72
CHD7-208ENST00000528280 ABCD1P33897 745 aa10.58□□□□□ -0.72
CHD7-208ENST00000528280 CA8P35219 290 aa10.58□□□□□ -0.72
CHD7-208ENST00000528280 LONP1P36776 959 aaKnown RBP10.58□□□□□ -0.72
CHD7-208ENST00000528280 PBX3P40426 434 aa10.58□□□□□ -0.72
CHD7-208ENST00000528280 SLC11A1P49279 550 aa10.58□□□□□ -0.72
CHD7-208ENST00000528280 ITIH3Q06033 890 aa10.58□□□□□ -0.72
CHD7-208ENST00000528280 DMP1Q13316 513 aaPredicted RBP10.58□□□□□ -0.72
CHD7-208ENST00000528280 KCNC3Q14003 757 aa10.58□□□□□ -0.72
CHD7-208ENST00000528280 IL17AQ16552 155 aa10.58□□□□□ -0.72
CHD7-208ENST00000528280 ECM1Q16610 540 aa10.58□□□□□ -0.72
CHD7-208ENST00000528280 DCAF4L1Q3SXM0 396 aa10.58□□□□□ -0.72
CHD7-208ENST00000528280 CES5AQ6NT32 575 aa10.58□□□□□ -0.72
CHD7-208ENST00000528280 RINT1Q6NUQ1 792 aa10.58□□□□□ -0.72
CHD7-208ENST00000528280 COLGALT2Q8IYK4 626 aa10.58□□□□□ -0.72
CHD7-208ENST00000528280 GPR65Q8IYL9 337 aa10.58□□□□□ -0.72
CHD7-208ENST00000528280 SYT2Q8N9I0 419 aaPredicted RBP10.58□□□□□ -0.72
CHD7-208ENST00000528280 SMRP1Q8NCR6 262 aa10.58□□□□□ -0.72
CHD7-208ENST00000528280 RPS6KC1Q96S38 1066 aa10.58□□□□□ -0.72
CHD7-208ENST00000528280 GAD1Q99259 594 aa10.58□□□□□ -0.72
CHD7-208ENST00000528280 MRPL17Q9NRX2 175 aaKnown RBP10.58□□□□□ -0.72
CHD7-208ENST00000528280 DZANK1Q9NVP4 752 aa10.58□□□□□ -0.72
CHD7-208ENST00000528280 PARP2Q9UGN5 583 aa10.58□□□□□ -0.72
CHD7-208ENST00000528280 PLXNA3P51805 1871 aa10.57□□□□□ -0.72
CHD7-208ENST00000528280 C5orf42Q9H799 3197 aa10.57□□□□□ -0.72
CHD7-208ENST00000528280 PTPRZ1P23471 2315 aaPredicted RBP10.57□□□□□ -0.72
CHD7-208ENST00000528280 MYO7AQ13402 2215 aa10.57□□□□□ -0.72
CHD7-208ENST00000528280 ARID2Q68CP9 1835 aa10.57□□□□□ -0.72
CHD7-208ENST00000528280 MEIS3P2A8K0S8 358 aa10.57□□□□□ -0.72
CHD7-208ENST00000528280 HIDE1A8MVS5 230 aa10.57□□□□□ -0.72
CHD7-208ENST00000528280 E9PMD0 336 aa10.57□□□□□ -0.72
CHD7-208ENST00000528280 B4GALT5O43286 388 aa10.57□□□□□ -0.72
CHD7-208ENST00000528280 CLASP2O75122 1294 aaKnown RBP10.57□□□□□ -0.72
CHD7-208ENST00000528280 OR1G1P47890 313 aa10.57□□□□□ -0.72
CHD7-208ENST00000528280 PEX3P56589 373 aa10.57□□□□□ -0.72
CHD7-208ENST00000528280 CREMQ03060 361 aa10.57□□□□□ -0.72
CHD7-208ENST00000528280 ZP2Q05996 745 aa10.57□□□□□ -0.72
CHD7-208ENST00000528280 GRIK3Q13003 919 aa10.57□□□□□ -0.72
CHD7-208ENST00000528280 STRN3Q13033 797 aa10.57□□□□□ -0.72
CHD7-208ENST00000528280 ZRSR1Q15695 479 aaKnown RBP10.57□□□□□ -0.72
CHD7-208ENST00000528280 CLUL1Q15846 466 aa10.57□□□□□ -0.72
CHD7-208ENST00000528280 KIAA1841Q6NSI8 718 aa10.57□□□□□ -0.72
CHD7-208ENST00000528280 ANKRD54Q6NXT1 300 aa10.57□□□□□ -0.72
CHD7-208ENST00000528280 C1orf186Q6ZWK4 172 aa10.57□□□□□ -0.72
CHD7-208ENST00000528280 CABP7Q86V35 215 aa10.57□□□□□ -0.72
CHD7-208ENST00000528280 PRSS33Q8NF86 280 aa10.57□□□□□ -0.72
CHD7-208ENST00000528280 SPIRE2Q8WWL2 714 aa10.57□□□□□ -0.72
CHD7-208ENST00000528280 NECTIN4Q96NY8 510 aa10.57□□□□□ -0.72
CHD7-208ENST00000528280 APOL6Q9BWW8 343 aa10.57□□□□□ -0.72
CHD7-208ENST00000528280 PHF7Q9BWX1 381 aaPredicted RBP10.57□□□□□ -0.72
CHD7-208ENST00000528280 CCDC113Q9H0I3 377 aa10.57□□□□□ -0.72
CHD7-208ENST00000528280 ZBP1Q9H171 429 aa10.57□□□□□ -0.72
CHD7-208ENST00000528280 RNF39Q9H2S5 420 aa10.57□□□□□ -0.72
CHD7-208ENST00000528280 ZSCAN16Q9H4T2 348 aaPredicted RBP10.57□□□□□ -0.72
CHD7-208ENST00000528280 KMT5AQ9NQR1 393 aa10.57□□□□□ -0.72
CHD7-208ENST00000528280 LARSQ9P2J5 1176 aaKnown RBP10.57□□□□□ -0.72
CHD7-208ENST00000528280 DNAJB4Q9UDY4 337 aa10.57□□□□□ -0.72
CHD7-208ENST00000528280 TNFSF13BQ9Y275 285 aa10.57□□□□□ -0.72
CHD7-208ENST00000528280 KIAA1671Q9BY89 1806 aa10.56□□□□□ -0.72
CHD7-208ENST00000528280 PLXNA4Q9HCM2 1894 aa10.56□□□□□ -0.72
CHD7-208ENST00000528280 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.56□□□□□ -0.72
CHD7-208ENST00000528280 VPS37CA5D8V6 355 aaPredicted RBP10.56□□□□□ -0.72
CHD7-208ENST00000528280 HIP1RO75146 1068 aa10.56□□□□□ -0.72
CHD7-208ENST00000528280 TADA2AO75478 443 aa10.56□□□□□ -0.72
CHD7-208ENST00000528280 GLP2RO95838 553 aa10.56□□□□□ -0.72
CHD7-208ENST00000528280 SOD2P04179 222 aa10.56□□□□□ -0.72
CHD7-208ENST00000528280 SSBP05455 408 aaKnown RBP eCLIP10.56□□□□□ -0.72
CHD7-208ENST00000528280 THP07101 528 aa10.56□□□□□ -0.72
CHD7-208ENST00000528280 PLA2G4BP0C869 781 aa10.56□□□□□ -0.72
CHD7-208ENST00000528280 LIG1P18858 919 aa10.56□□□□□ -0.72
CHD7-208ENST00000528280 AKAP5P24588 427 aa10.56□□□□□ -0.72
CHD7-208ENST00000528280 KLRC2P26717 231 aa10.56□□□□□ -0.72
CHD7-208ENST00000528280 CDC25AP30304 524 aa10.56□□□□□ -0.72
CHD7-208ENST00000528280 MLH1P40692 756 aa10.56□□□□□ -0.72
CHD7-208ENST00000528280 NPTX2P47972 431 aa10.56□□□□□ -0.72
CHD7-208ENST00000528280 YARSP54577 528 aaKnown RBP10.56□□□□□ -0.72
CHD7-208ENST00000528280 PTPN5P54829 565 aa10.56□□□□□ -0.72
CHD7-208ENST00000528280 DSC1Q08554 894 aa10.56□□□□□ -0.72
CHD7-208ENST00000528280 ATAT1Q5SQI0 421 aa10.56□□□□□ -0.72
CHD7-208ENST00000528280 ATF7IP2Q5U623 682 aa10.56□□□□□ -0.72
CHD7-208ENST00000528280 BSNDQ8WZ55 320 aa10.56□□□□□ -0.72
CHD7-208ENST00000528280 RIPOR3Q96MK2 946 aa10.56□□□□□ -0.72
CHD7-208ENST00000528280 TCHPQ9BT92 498 aa10.56□□□□□ -0.72
CHD7-208ENST00000528280 MMTAG2Q9BU76 263 aaKnown RBP10.56□□□□□ -0.72
CHD7-208ENST00000528280 MRPL4Q9BYD3 311 aaKnown RBP10.56□□□□□ -0.72
CHD7-208ENST00000528280 ADAM7Q9H2U9 754 aa10.56□□□□□ -0.72
CHD7-208ENST00000528280 NXF3Q9H4D5 531 aaKnown RBP10.56□□□□□ -0.72
CHD7-208ENST00000528280 PDZD7Q9H5P4 517 aa10.56□□□□□ -0.72
CHD7-208ENST00000528280 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.56□□□□□ -0.72
CHD7-208ENST00000528280 TOPORSQ9NS56 1045 aaPredicted RBP10.56□□□□□ -0.72
CHD7-208ENST00000528280 BARX2Q9UMQ3 279 aaPredicted RBP10.56□□□□□ -0.72
CHD7-208ENST00000528280 HES2Q9Y543 173 aa10.56□□□□□ -0.72
CHD7-208ENST00000528280 PCDHGC5Q9Y5F6 944 aa10.56□□□□□ -0.72
CHD7-208ENST00000528280 CACNA1BQ00975 2339 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms