RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 C2orf54Q08AI8 447 aa18.69■□□□□ 0.58
PCDHA6-202ENST00000527624 KIF22Q14807 665 aa18.69■□□□□ 0.58
PCDHA6-202ENST00000527624 LMBRD2Q68DH5 695 aaPredicted RBP18.69■□□□□ 0.58
PCDHA6-202ENST00000527624 CCDC62Q6P9F0 684 aa18.69■□□□□ 0.58
PCDHA6-202ENST00000527624 KCNV1Q6PIU1 500 aa18.69■□□□□ 0.58
PCDHA6-202ENST00000527624 PALB2Q86YC2 1186 aa18.69■□□□□ 0.58
PCDHA6-202ENST00000527624 MS4A4AQ96JQ5 239 aa18.69■□□□□ 0.58
PCDHA6-202ENST00000527624 TARS2Q9BW92 718 aaKnown RBP18.69■□□□□ 0.58
PCDHA6-202ENST00000527624 SCN4AP35499 1836 aa18.69■□□□□ 0.58
PCDHA6-202ENST00000527624 CCL15-CCL14A0A0B4J2E2 113 aa18.69■□□□□ 0.58
PCDHA6-202ENST00000527624 TARSL2A2RTX5 802 aaKnown RBP18.69■□□□□ 0.58
PCDHA6-202ENST00000527624 ZNF233A6NK53 670 aa18.69■□□□□ 0.58
PCDHA6-202ENST00000527624 BTNL10A8MVZ5 291 aa18.69■□□□□ 0.58
PCDHA6-202ENST00000527624 PMM2O15305 246 aa18.69■□□□□ 0.58
PCDHA6-202ENST00000527624 EDN1P05305 212 aa18.69■□□□□ 0.58
PCDHA6-202ENST00000527624 PRLRP16471 622 aa18.69■□□□□ 0.58
PCDHA6-202ENST00000527624 ACOT2P49753 483 aa18.69■□□□□ 0.58
PCDHA6-202ENST00000527624 NLRP11P59045 1033 aaKnown RBP18.69■□□□□ 0.58
PCDHA6-202ENST00000527624 GPS2Q13227 327 aa18.69■□□□□ 0.58
PCDHA6-202ENST00000527624 CASP8Q14790 479 aa18.69■□□□□ 0.58
PCDHA6-202ENST00000527624 CCL15Q16663 113 aa18.69■□□□□ 0.58
PCDHA6-202ENST00000527624 PTPROQ16827 1216 aa18.69■□□□□ 0.58
PCDHA6-202ENST00000527624 SV2AQ7L0J3 742 aa18.69■□□□□ 0.58
PCDHA6-202ENST00000527624 SHCBP1Q8NEM2 672 aa18.69■□□□□ 0.58
PCDHA6-202ENST00000527624 PKNOX2Q96KN3 472 aa18.69■□□□□ 0.58
PCDHA6-202ENST00000527624 KREMEN1Q96MU8 473 aa18.69■□□□□ 0.58
PCDHA6-202ENST00000527624 HAPLN2Q9GZV7 340 aa18.69■□□□□ 0.58
PCDHA6-202ENST00000527624 PDE11AQ9HCR9 933 aa18.69■□□□□ 0.58
PCDHA6-202ENST00000527624 KCNG1Q9UIX4 513 aa18.69■□□□□ 0.58
PCDHA6-202ENST00000527624 EXTL3O43909 919 aa18.68■□□□□ 0.58
PCDHA6-202ENST00000527624 MAFO75444 373 aaPredicted RBP18.68■□□□□ 0.58
PCDHA6-202ENST00000527624 CETPP11597 493 aa18.68■□□□□ 0.58
PCDHA6-202ENST00000527624 TNFAIP3P21580 790 aa18.68■□□□□ 0.58
PCDHA6-202ENST00000527624 MCM3P25205 808 aa18.68■□□□□ 0.58
PCDHA6-202ENST00000527624 ABCD1P33897 745 aa18.68■□□□□ 0.58
PCDHA6-202ENST00000527624 MATR3P43243 847 aaKnown RBP eCLIP18.68■□□□□ 0.58
PCDHA6-202ENST00000527624 GALCP54803 685 aa18.68■□□□□ 0.58
PCDHA6-202ENST00000527624 MCCD1P59942 119 aaPredicted RBP18.68■□□□□ 0.58
PCDHA6-202ENST00000527624 ARMCX2Q7L311 632 aa18.68■□□□□ 0.58
PCDHA6-202ENST00000527624 USP37Q86T82 979 aa18.68■□□□□ 0.58
PCDHA6-202ENST00000527624 FMNL3Q8IVF7 1028 aa18.68■□□□□ 0.58
PCDHA6-202ENST00000527624 LRRC71Q8N4P6 559 aa18.68■□□□□ 0.58
PCDHA6-202ENST00000527624 FBXL13Q8NEE6 735 aa18.68■□□□□ 0.58
PCDHA6-202ENST00000527624 PRPF31Q8WWY3 499 aaKnown RBP18.68■□□□□ 0.58
PCDHA6-202ENST00000527624 FAM167AQ96KS9 214 aa18.68■□□□□ 0.58
PCDHA6-202ENST00000527624 TAS2R14Q9NYV8 317 aa18.68■□□□□ 0.58
PCDHA6-202ENST00000527624 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.68■□□□□ 0.58
PCDHA6-202ENST00000527624 AGO2Q9UKV8 859 aaKnown RBP18.68■□□□□ 0.58
PCDHA6-202ENST00000527624 MCM3APO60318 1980 aa18.68■□□□□ 0.58
PCDHA6-202ENST00000527624 ABCB4P21439 1286 aa18.68■□□□□ 0.58
PCDHA6-202ENST00000527624 WNT7BP56706 349 aa18.68■□□□□ 0.58
PCDHA6-202ENST00000527624 GJC2Q5T442 439 aaPredicted RBP18.68■□□□□ 0.58
PCDHA6-202ENST00000527624 BRI3BPQ8WY22 251 aa18.68■□□□□ 0.58
PCDHA6-202ENST00000527624 BBXQ8WY36 941 aaPredicted RBP18.68■□□□□ 0.58
PCDHA6-202ENST00000527624 PI4K2AQ9BTU6 479 aa18.68■□□□□ 0.58
PCDHA6-202ENST00000527624 RAB20Q9NX57 234 aa18.68■□□□□ 0.58
PCDHA6-202ENST00000527624 GRIN3BO60391 1043 aa18.67■□□□□ 0.58
PCDHA6-202ENST00000527624 LGR5O75473 907 aa18.67■□□□□ 0.58
PCDHA6-202ENST00000527624 ZBTB41Q5SVQ8 909 aa18.67■□□□□ 0.58
PCDHA6-202ENST00000527624 MEI1Q5TIA1 1274 aa18.67■□□□□ 0.58
PCDHA6-202ENST00000527624 CCDC181Q5TID7 509 aa18.67■□□□□ 0.58
PCDHA6-202ENST00000527624 MORC4Q8TE76 937 aa18.67■□□□□ 0.58
PCDHA6-202ENST00000527624 TRAPPC12Q8WVT3 735 aa18.67■□□□□ 0.58
PCDHA6-202ENST00000527624 MS4A14Q96JA4 679 aa18.67■□□□□ 0.58
PCDHA6-202ENST00000527624 AGPAT1Q99943 283 aa18.67■□□□□ 0.58
PCDHA6-202ENST00000527624 ACP6Q9NPH0 428 aa18.67■□□□□ 0.58
PCDHA6-202ENST00000527624 TSKSQ9UJT2 592 aa18.67■□□□□ 0.58
PCDHA6-202ENST00000527624 COQ4Q9Y3A0 265 aa18.67■□□□□ 0.58
PCDHA6-202ENST00000527624 ASB14A6NK59 587 aa18.66■□□□□ 0.58
PCDHA6-202ENST00000527624 TTLL13PA6NNM8 815 aa18.66■□□□□ 0.58
PCDHA6-202ENST00000527624 ZBTB42B2RXF5 422 aa18.66■□□□□ 0.58
PCDHA6-202ENST00000527624 HARSP12081 509 aaKnown RBP18.66■□□□□ 0.58
PCDHA6-202ENST00000527624 ADORA2AP29274 412 aa18.66■□□□□ 0.58
PCDHA6-202ENST00000527624 GPC3P51654 580 aa18.66■□□□□ 0.58
PCDHA6-202ENST00000527624 GTF2A2P52657 109 aa18.66■□□□□ 0.58
PCDHA6-202ENST00000527624 CCNA1P78396 465 aa18.66■□□□□ 0.58
PCDHA6-202ENST00000527624 MKRN4PQ13434 485 aaPredicted RBP18.66■□□□□ 0.58
PCDHA6-202ENST00000527624 TTLL4Q14679 1199 aa18.66■□□□□ 0.58
PCDHA6-202ENST00000527624 PLCB4Q15147 1175 aa18.66■□□□□ 0.58
PCDHA6-202ENST00000527624 ATP8B4Q8TF62 1192 aa18.66■□□□□ 0.58
PCDHA6-202ENST00000527624 PSPC1Q8WXF1 523 aaKnown RBP18.66■□□□□ 0.58
PCDHA6-202ENST00000527624 ZBTB10Q96DT7 871 aa18.66■□□□□ 0.58
PCDHA6-202ENST00000527624 TRPC6Q9Y210 931 aa18.66■□□□□ 0.58
PCDHA6-202ENST00000527624 STYXL1Q9Y6J8 313 aa18.66■□□□□ 0.58
PCDHA6-202ENST00000527624 ADCY3O60266 1144 aa18.66■□□□□ 0.58
PCDHA6-202ENST00000527624 SGPL1O95470 568 aa18.66■□□□□ 0.58
PCDHA6-202ENST00000527624 SRGAP2CP0DJJ0 459 aa18.66■□□□□ 0.58
PCDHA6-202ENST00000527624 GTF2H1P32780 548 aa18.66■□□□□ 0.58
PCDHA6-202ENST00000527624 SEZ6Q53EL9 994 aa18.66■□□□□ 0.58
PCDHA6-202ENST00000527624 HELQQ8TDG4 1101 aa18.66■□□□□ 0.58
PCDHA6-202ENST00000527624 ZNF516Q92618 1163 aa18.66■□□□□ 0.58
PCDHA6-202ENST00000527624 NT5C1BQ96P26 610 aa18.66■□□□□ 0.58
PCDHA6-202ENST00000527624 MSTO1Q9BUK6 570 aa18.66■□□□□ 0.58
PCDHA6-202ENST00000527624 CYP26A1O43174 497 aa18.65■□□□□ 0.58
PCDHA6-202ENST00000527624 MFAP3P55082 362 aa18.65■□□□□ 0.58
PCDHA6-202ENST00000527624 TAF3Q5VWG9 929 aa18.65■□□□□ 0.58
PCDHA6-202ENST00000527624 CRELD2Q6UXH1 353 aaPredicted RBP18.65■□□□□ 0.58
PCDHA6-202ENST00000527624 PLPPR4Q7Z2D5 763 aa18.65■□□□□ 0.58
PCDHA6-202ENST00000527624 ZNF572Q7Z3I7 529 aaPredicted RBP18.65■□□□□ 0.58
PCDHA6-202ENST00000527624 LRRC57Q8N9N7 239 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms