RNA–Protein interactions for RNA: ENST00000527064.1

NXF1-204, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-204ENST00000527064 RNF39Q9H2S5 420 aa15.81■□□□□ 0.12
NXF1-204ENST00000527064 TNMDQ9H2S6 317 aa15.81■□□□□ 0.12
NXF1-204ENST00000527064 SEL1LQ9UBV2 794 aa15.81■□□□□ 0.12
NXF1-204ENST00000527064 PARP2Q9UGN5 583 aa15.81■□□□□ 0.12
NXF1-204ENST00000527064 PUF60Q9UHX1 559 aaKnown RBP15.81■□□□□ 0.12
NXF1-204ENST00000527064 MYO9BQ13459 2157 aa15.8■□□□□ 0.12
NXF1-204ENST00000527064 POMCP01189 267 aa15.8■□□□□ 0.12
NXF1-204ENST00000527064 GAP43P17677 238 aa15.8■□□□□ 0.12
NXF1-204ENST00000527064 AKAP5P24588 427 aa15.8■□□□□ 0.12
NXF1-204ENST00000527064 AMPD3Q01432 767 aa15.8■□□□□ 0.12
NXF1-204ENST00000527064 RESP18Q5W5W9 173 aa15.8■□□□□ 0.12
NXF1-204ENST00000527064 PDE12Q6L8Q7 609 aaKnown RBP15.8■□□□□ 0.12
NXF1-204ENST00000527064 MPZL3Q6UWV2 235 aa15.8■□□□□ 0.12
NXF1-204ENST00000527064 ZPBP2Q6X784 338 aa15.8■□□□□ 0.12
NXF1-204ENST00000527064 DYMQ7RTS9 669 aa15.8■□□□□ 0.12
NXF1-204ENST00000527064 HAUS6Q7Z4H7 955 aa15.8■□□□□ 0.12
NXF1-204ENST00000527064 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.8■□□□□ 0.12
NXF1-204ENST00000527064 SLC39A11Q8N1S5 342 aa15.8■□□□□ 0.12
NXF1-204ENST00000527064 LEO1Q8WVC0 666 aaPredicted RBP15.8■□□□□ 0.12
NXF1-204ENST00000527064 MRPS27Q92552 414 aaKnown RBP15.8■□□□□ 0.12
NXF1-204ENST00000527064 BICD1Q96G01 975 aa15.8■□□□□ 0.12
NXF1-204ENST00000527064 TMEM169Q96HH4 297 aa15.8■□□□□ 0.12
NXF1-204ENST00000527064 GBP3Q9H0R5 595 aa15.8■□□□□ 0.12
NXF1-204ENST00000527064 NRDE2Q9H7Z3 1164 aa15.8■□□□□ 0.12
NXF1-204ENST00000527064 TLR9Q9NR96 1032 aa15.8■□□□□ 0.12
NXF1-204ENST00000527064 THEGQ9P2T0 379 aa15.8■□□□□ 0.12
NXF1-204ENST00000527064 STK39Q9UEW8 545 aa15.8■□□□□ 0.12
NXF1-204ENST00000527064 MYMKA6NI61 221 aa15.79■□□□□ 0.12
NXF1-204ENST00000527064 NR1I2O75469 434 aa15.79■□□□□ 0.12
NXF1-204ENST00000527064 TOM1L1O75674 476 aa15.79■□□□□ 0.12
NXF1-204ENST00000527064 RECQL4O94761 1208 aa15.79■□□□□ 0.12
NXF1-204ENST00000527064 MCF2P10911 925 aa15.79■□□□□ 0.12
NXF1-204ENST00000527064 PBX3P40426 434 aa15.79■□□□□ 0.12
NXF1-204ENST00000527064 SCNN1GP51170 649 aa15.79■□□□□ 0.12
NXF1-204ENST00000527064 GRIK3Q13003 919 aa15.79■□□□□ 0.12
NXF1-204ENST00000527064 BMS1Q14692 1282 aaKnown RBP15.79■□□□□ 0.12
NXF1-204ENST00000527064 NOLC1Q14978 699 aaKnown RBP eCLIP15.79■□□□□ 0.12
NXF1-204ENST00000527064 E2F4Q16254 413 aa15.79■□□□□ 0.12
NXF1-204ENST00000527064 EEF1DP3Q658K8 133 aa15.79■□□□□ 0.12
NXF1-204ENST00000527064 DHX58Q96C10 678 aa15.79■□□□□ 0.12
NXF1-204ENST00000527064 ZFP42Q96MM3 310 aa15.79■□□□□ 0.12
NXF1-204ENST00000527064 TCHPQ9BT92 498 aa15.79■□□□□ 0.12
NXF1-204ENST00000527064 CCDC94Q9BW85 323 aaPredicted RBP15.79■□□□□ 0.12
NXF1-204ENST00000527064 TARS2Q9BW92 718 aaKnown RBP15.79■□□□□ 0.12
NXF1-204ENST00000527064 PTPRHQ9HD43 1115 aa15.79■□□□□ 0.12
NXF1-204ENST00000527064 SNTG2Q9NY99 539 aa15.79■□□□□ 0.12
NXF1-204ENST00000527064 COG5Q9UP83 839 aa15.79■□□□□ 0.12
NXF1-204ENST00000527064 USP20Q9Y2K6 914 aa15.79■□□□□ 0.12
NXF1-204ENST00000527064 FSD2A1L4K1 749 aa15.78■□□□□ 0.12
NXF1-204ENST00000527064 HNRNPDLO14979 420 aaKnown RBP15.78■□□□□ 0.12
NXF1-204ENST00000527064 POLR2DO15514 142 aaKnown RBP15.78■□□□□ 0.12
NXF1-204ENST00000527064 NCK2O43639 380 aa15.78■□□□□ 0.12
NXF1-204ENST00000527064 CSPG5O95196 566 aa15.78■□□□□ 0.12
NXF1-204ENST00000527064 GALTP07902 379 aa15.78■□□□□ 0.12
NXF1-204ENST00000527064 PROZP22891 400 aa15.78■□□□□ 0.12
NXF1-204ENST00000527064 YARSP54577 528 aaKnown RBP15.78■□□□□ 0.12
NXF1-204ENST00000527064 TCEAL5Q5H9L2 206 aa15.78■□□□□ 0.12
NXF1-204ENST00000527064 ADALQ6DHV7 355 aa15.78■□□□□ 0.12
NXF1-204ENST00000527064 SFR1Q86XK3 245 aa15.78■□□□□ 0.12
NXF1-204ENST00000527064 HVCN1Q96D96 273 aa15.78■□□□□ 0.12
NXF1-204ENST00000527064 CDT1Q9H211 546 aa15.78■□□□□ 0.12
NXF1-204ENST00000527064 ST6GALNAC4Q9H4F1 302 aa15.78■□□□□ 0.12
NXF1-204ENST00000527064 ENTPD7Q9NQZ7 604 aa15.78■□□□□ 0.12
NXF1-204ENST00000527064 TOPORSQ9NS56 1045 aaPredicted RBP15.78■□□□□ 0.12
NXF1-204ENST00000527064 KBTBD4Q9NVX7 518 aa15.78■□□□□ 0.12
NXF1-204ENST00000527064 ANKFY1Q9P2R3 1169 aa15.78■□□□□ 0.12
NXF1-204ENST00000527064 TBX20Q9UMR3 447 aa15.78■□□□□ 0.12
NXF1-204ENST00000527064 PLXNA4Q9HCM2 1894 aa15.78■□□□□ 0.12
NXF1-204ENST00000527064 FRMD3A2A2Y4 597 aa15.77■□□□□ 0.12
NXF1-204ENST00000527064 CLDN3O15551 220 aa15.77■□□□□ 0.12
NXF1-204ENST00000527064 ALDH2P05091 517 aa15.77■□□□□ 0.12
NXF1-204ENST00000527064 IDEP14735 1019 aa15.77■□□□□ 0.12
NXF1-204ENST00000527064 DNAJB1P25685 340 aa15.77■□□□□ 0.12
NXF1-204ENST00000527064 ANP32AP39687 249 aaKnown RBP15.77■□□□□ 0.12
NXF1-204ENST00000527064 GRM5P41594 1212 aa15.77■□□□□ 0.12
NXF1-204ENST00000527064 MATR3P43243 847 aaKnown RBP eCLIP15.77■□□□□ 0.12
NXF1-204ENST00000527064 SLC11A1P49279 550 aa15.77■□□□□ 0.12
NXF1-204ENST00000527064 LIG4P49917 911 aa15.77■□□□□ 0.12
NXF1-204ENST00000527064 AFF1P51825 1210 aaKnown RBP15.77■□□□□ 0.12
NXF1-204ENST00000527064 GTF2BQ00403 316 aa15.77■□□□□ 0.12
NXF1-204ENST00000527064 DSC1Q08554 894 aa15.77■□□□□ 0.12
NXF1-204ENST00000527064 CAMK1Q14012 370 aa15.77■□□□□ 0.12
NXF1-204ENST00000527064 AAK1Q2M2I8 961 aa15.77■□□□□ 0.12
NXF1-204ENST00000527064 ZBTB33Q86T24 672 aa15.77■□□□□ 0.12
NXF1-204ENST00000527064 ZNF280BQ86YH2 543 aa15.77■□□□□ 0.12
NXF1-204ENST00000527064 CCDC65Q8IXS2 484 aa15.77■□□□□ 0.12
NXF1-204ENST00000527064 CEP57L1Q8IYX8 460 aa15.77■□□□□ 0.12
NXF1-204ENST00000527064 MICAL1Q8TDZ2 1067 aa15.77■□□□□ 0.12
NXF1-204ENST00000527064 HLA-CQ95604 372 aa15.77■□□□□ 0.12
NXF1-204ENST00000527064 DNAJC19Q96DA6 116 aa15.77■□□□□ 0.12
NXF1-204ENST00000527064 IGSF21Q96ID5 467 aa15.77■□□□□ 0.12
NXF1-204ENST00000527064 MRPL44Q9H9J2 332 aaKnown RBP15.77■□□□□ 0.12
NXF1-204ENST00000527064 NGRNQ9NPE2 291 aaKnown RBP15.77■□□□□ 0.12
NXF1-204ENST00000527064 OLFML3Q9NRN5 406 aa15.77■□□□□ 0.12
NXF1-204ENST00000527064 KLK14Q9P0G3 267 aa15.77■□□□□ 0.12
NXF1-204ENST00000527064 DNAJB4Q9UDY4 337 aa15.77■□□□□ 0.12
NXF1-204ENST00000527064 KCNH3Q9ULD8 1083 aa15.77■□□□□ 0.12
NXF1-204ENST00000527064 FAN1Q9Y2M0 1017 aa15.77■□□□□ 0.12
NXF1-204ENST00000527064 GDAQ9Y2T3 454 aa15.77■□□□□ 0.12
NXF1-204ENST00000527064 PRRC2BQ5JSZ5 2229 aaKnown RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms