RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 BLOC1S1P78537 153 aa4.18□□□□□ -1.74
ECHDC1-219ENST00000526299 APBA1Q02410 837 aa4.18□□□□□ -1.74
ECHDC1-219ENST00000526299 RBL2Q08999 1139 aa4.18□□□□□ -1.74
ECHDC1-219ENST00000526299 CREB3L3Q68CJ9 461 aa4.18□□□□□ -1.74
ECHDC1-219ENST00000526299 SPATA31D4Q6ZUB0 917 aa4.18□□□□□ -1.74
ECHDC1-219ENST00000526299 ZZZ3Q8IYH5 903 aa4.18□□□□□ -1.74
ECHDC1-219ENST00000526299 LILRB2Q8N423 598 aa4.18□□□□□ -1.74
ECHDC1-219ENST00000526299 RNF169Q8NCN4 708 aa4.18□□□□□ -1.74
ECHDC1-219ENST00000526299 FERMT2Q96AC1 680 aa4.18□□□□□ -1.74
ECHDC1-219ENST00000526299 FDXACB1Q9BRP7 624 aaPredicted RBP4.18□□□□□ -1.74
ECHDC1-219ENST00000526299 IFT57Q9NWB7 429 aa4.18□□□□□ -1.74
ECHDC1-219ENST00000526299 OXSMQ9NWU1 459 aa4.18□□□□□ -1.74
ECHDC1-219ENST00000526299 RNF181Q9P0P0 153 aa4.18□□□□□ -1.74
ECHDC1-219ENST00000526299 USP15Q9Y4E8 981 aaPredicted RBP4.18□□□□□ -1.74
ECHDC1-219ENST00000526299 PCDHB6Q9Y5E3 794 aa4.18□□□□□ -1.74
ECHDC1-219ENST00000526299 MAST3O60307 1309 aa4.18□□□□□ -1.74
ECHDC1-219ENST00000526299 ZMYM3Q14202 1370 aa4.17□□□□□ -1.74
ECHDC1-219ENST00000526299 LRRC3CA6NJW4 275 aa4.17□□□□□ -1.74
ECHDC1-219ENST00000526299 CBX4O00257 560 aa4.17□□□□□ -1.74
ECHDC1-219ENST00000526299 XPAP23025 273 aaPredicted RBP4.17□□□□□ -1.74
ECHDC1-219ENST00000526299 SIM1P81133 766 aaPredicted RBP4.17□□□□□ -1.74
ECHDC1-219ENST00000526299 NHLH1Q02575 133 aa4.17□□□□□ -1.74
ECHDC1-219ENST00000526299 SCAPQ12770 1279 aa4.17□□□□□ -1.74
ECHDC1-219ENST00000526299 ZNF169Q14929 603 aaPredicted RBP4.17□□□□□ -1.74
ECHDC1-219ENST00000526299 CFAP100Q494V2 611 aa4.17□□□□□ -1.74
ECHDC1-219ENST00000526299 FNDC3BQ53EP0 1204 aaKnown RBP4.17□□□□□ -1.74
ECHDC1-219ENST00000526299 C2orf27AQ580R0 203 aa4.17□□□□□ -1.74
ECHDC1-219ENST00000526299 FAM102AQ5T9C2 384 aaPredicted RBP4.17□□□□□ -1.74
ECHDC1-219ENST00000526299 METRNLQ641Q3 311 aa4.17□□□□□ -1.74
ECHDC1-219ENST00000526299 DRICH1Q6PGQ1 229 aaPredicted RBP4.17□□□□□ -1.74
ECHDC1-219ENST00000526299 CDYL2Q8N8U2 506 aa4.17□□□□□ -1.74
ECHDC1-219ENST00000526299 C9orf106Q8NAJ2 232 aa4.17□□□□□ -1.74
ECHDC1-219ENST00000526299 SLC9A6Q92581 669 aa4.17□□□□□ -1.74
ECHDC1-219ENST00000526299 NEU1Q99519 415 aa4.17□□□□□ -1.74
ECHDC1-219ENST00000526299 SEMA4GQ9NTN9 838 aa4.17□□□□□ -1.74
ECHDC1-219ENST00000526299 H2AFY2Q9P0M6 372 aaPredicted RBP4.17□□□□□ -1.74
ECHDC1-219ENST00000526299 ZKSCAN5Q9Y2L8 839 aa4.17□□□□□ -1.74
ECHDC1-219ENST00000526299 FPGT-TNNI3KV9GXZ4 949 aa4.17□□□□□ -1.74
ECHDC1-219ENST00000526299 SEC24DO94855 1032 aaPredicted RBP4.16□□□□□ -1.74
ECHDC1-219ENST00000526299 RBP3P10745 1247 aa4.16□□□□□ -1.74
ECHDC1-219ENST00000526299 CTGFP29279 349 aa4.16□□□□□ -1.74
ECHDC1-219ENST00000526299 UBE3CQ15386 1083 aa4.16□□□□□ -1.74
ECHDC1-219ENST00000526299 DDB1Q16531 1140 aa4.16□□□□□ -1.74
ECHDC1-219ENST00000526299 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.16□□□□□ -1.74
ECHDC1-219ENST00000526299 EFCAB12Q6NXP0 572 aa4.16□□□□□ -1.74
ECHDC1-219ENST00000526299 ESPNLQ6ZVH7 1005 aa4.16□□□□□ -1.74
ECHDC1-219ENST00000526299 GPR149Q86SP6 731 aa4.16□□□□□ -1.74
ECHDC1-219ENST00000526299 HOMEZQ8IX15 550 aa4.16□□□□□ -1.74
ECHDC1-219ENST00000526299 GAB3Q8WWW8 586 aa4.16□□□□□ -1.74
ECHDC1-219ENST00000526299 MKL1Q969V6 931 aa4.16□□□□□ -1.74
ECHDC1-219ENST00000526299 Q96MF0 132 aa4.16□□□□□ -1.74
ECHDC1-219ENST00000526299 ZMAT4Q9H898 229 aa4.16□□□□□ -1.74
ECHDC1-219ENST00000526299 IGSF5Q9NSI5 407 aa4.16□□□□□ -1.74
ECHDC1-219ENST00000526299 TBKBP1A7MCY6 615 aa4.15□□□□□ -1.75
ECHDC1-219ENST00000526299 ATP2A2P16615 1042 aaKnown RBP4.15□□□□□ -1.75
ECHDC1-219ENST00000526299 SDSP20132 328 aa4.15□□□□□ -1.75
ECHDC1-219ENST00000526299 CD40P25942 277 aa4.15□□□□□ -1.75
ECHDC1-219ENST00000526299 RARRES1P49788 294 aa4.15□□□□□ -1.75
ECHDC1-219ENST00000526299 MGAT5Q09328 741 aa4.15□□□□□ -1.75
ECHDC1-219ENST00000526299 ZBTB41Q5SVQ8 909 aa4.15□□□□□ -1.75
ECHDC1-219ENST00000526299 LMBR1LQ6UX01 489 aa4.15□□□□□ -1.75
ECHDC1-219ENST00000526299 PASD1Q8IV76 773 aa4.15□□□□□ -1.75
ECHDC1-219ENST00000526299 ZNF366Q8N895 744 aa4.15□□□□□ -1.75
ECHDC1-219ENST00000526299 PMFBP1Q8TBY8 1022 aa4.15□□□□□ -1.75
ECHDC1-219ENST00000526299 TFAP2CQ92754 450 aa4.15□□□□□ -1.75
ECHDC1-219ENST00000526299 ZNF496Q96IT1 587 aaPredicted RBP4.15□□□□□ -1.75
ECHDC1-219ENST00000526299 ZNF778Q96MU6 729 aa4.15□□□□□ -1.75
ECHDC1-219ENST00000526299 CDC5LQ99459 802 aaKnown RBP4.15□□□□□ -1.75
ECHDC1-219ENST00000526299 MTFR1LQ9H019 292 aa4.15□□□□□ -1.75
ECHDC1-219ENST00000526299 MSRAQ9UJ68 235 aa4.15□□□□□ -1.75
ECHDC1-219ENST00000526299 ST20-MTHFSA0A0A6YYL1 179 aa4.14□□□□□ -1.75
ECHDC1-219ENST00000526299 A0A1W2PR48 441 aa4.14□□□□□ -1.75
ECHDC1-219ENST00000526299 CDKL5O76039 1030 aa4.14□□□□□ -1.75
ECHDC1-219ENST00000526299 FOSP01100 380 aaPredicted RBP4.14□□□□□ -1.75
ECHDC1-219ENST00000526299 CFIP05156 583 aa4.14□□□□□ -1.75
ECHDC1-219ENST00000526299 FDXRP22570 491 aa4.14□□□□□ -1.75
ECHDC1-219ENST00000526299 MGAT1P26572 445 aa4.14□□□□□ -1.75
ECHDC1-219ENST00000526299 ZNF81P51508 661 aa4.14□□□□□ -1.75
ECHDC1-219ENST00000526299 KRTAP10-7P60409 375 aaPredicted RBP4.14□□□□□ -1.75
ECHDC1-219ENST00000526299 C1QL2Q7Z5L3 287 aa4.14□□□□□ -1.75
ECHDC1-219ENST00000526299 NXPE1Q8N323 547 aa4.14□□□□□ -1.75
ECHDC1-219ENST00000526299 SH2D3CQ8N5H7 860 aa4.14□□□□□ -1.75
ECHDC1-219ENST00000526299 PHACTR3Q96KR7 559 aa4.14□□□□□ -1.75
ECHDC1-219ENST00000526299 CCDC9Q9Y3X0 531 aaKnown RBP4.14□□□□□ -1.75
ECHDC1-219ENST00000526299 PRSS38A1L453 326 aa4.13□□□□□ -1.75
ECHDC1-219ENST00000526299 CGB1A6NKQ9 187 aa4.13□□□□□ -1.75
ECHDC1-219ENST00000526299 B5MCH6 92 aa4.13□□□□□ -1.75
ECHDC1-219ENST00000526299 NRP2O60462 931 aa4.13□□□□□ -1.75
ECHDC1-219ENST00000526299 PFKMP08237 780 aa4.13□□□□□ -1.75
ECHDC1-219ENST00000526299 ELANEP08246 267 aa4.13□□□□□ -1.75
ECHDC1-219ENST00000526299 CHN2P52757 468 aa4.13□□□□□ -1.75
ECHDC1-219ENST00000526299 NRG3P56975 720 aa4.13□□□□□ -1.75
ECHDC1-219ENST00000526299 MXRA7P84157 204 aa4.13□□□□□ -1.75
ECHDC1-219ENST00000526299 SRSF4Q08170 494 aaKnown RBP4.13□□□□□ -1.75
ECHDC1-219ENST00000526299 LRRC32Q14392 662 aa4.13□□□□□ -1.75
ECHDC1-219ENST00000526299 BMT2Q1RMZ1 405 aa4.13□□□□□ -1.75
ECHDC1-219ENST00000526299 Q6ZNX1 250 aa4.13□□□□□ -1.75
ECHDC1-219ENST00000526299 MDM1Q8TC05 714 aa4.13□□□□□ -1.75
ECHDC1-219ENST00000526299 C1QTNF7Q9BXJ2 289 aa4.13□□□□□ -1.75
ECHDC1-219ENST00000526299 KLK15Q9H2R5 256 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms