RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 IGFBP6P24592 240 aaPredicted RBP7.32□□□□□ -1.24
CD44-221ENST00000526000 PTENP60484 403 aa7.32□□□□□ -1.24
CD44-221ENST00000526000 GPC5P78333 572 aa7.32□□□□□ -1.24
CD44-221ENST00000526000 FUT10Q6P4F1 479 aa7.32□□□□□ -1.24
CD44-221ENST00000526000 DCLRE1AQ6PJP8 1040 aa7.32□□□□□ -1.24
CD44-221ENST00000526000 PARM1Q6UWI2 310 aa7.32□□□□□ -1.24
CD44-221ENST00000526000 C15orf39Q6ZRI6 1047 aa7.32□□□□□ -1.24
CD44-221ENST00000526000 RUFY3Q7L099 469 aa7.32□□□□□ -1.24
CD44-221ENST00000526000 KRT25Q7Z3Z0 450 aa7.32□□□□□ -1.24
CD44-221ENST00000526000 NEK8Q86SG6 692 aa7.32□□□□□ -1.24
CD44-221ENST00000526000 PIGOQ8TEQ8 1089 aa7.32□□□□□ -1.24
CD44-221ENST00000526000 TCP11Q8WWU5 503 aa7.32□□□□□ -1.24
CD44-221ENST00000526000 STAMQ92783 540 aa7.32□□□□□ -1.24
CD44-221ENST00000526000 MBOAT7Q96N66 472 aa7.32□□□□□ -1.24
CD44-221ENST00000526000 EIF2AK1Q9BQI3 630 aaKnown RBP7.32□□□□□ -1.24
CD44-221ENST00000526000 AGXT2Q9BYV1 514 aa7.32□□□□□ -1.24
CD44-221ENST00000526000 TRIM6Q9C030 488 aaPredicted RBP7.32□□□□□ -1.24
CD44-221ENST00000526000 CSRNP2Q9H175 543 aa7.32□□□□□ -1.24
CD44-221ENST00000526000 NXF3Q9H4D5 531 aaKnown RBP7.32□□□□□ -1.24
CD44-221ENST00000526000 RXFP1Q9HBX9 757 aa7.32□□□□□ -1.24
CD44-221ENST00000526000 ZSWIM6Q9HCJ5 1215 aa7.32□□□□□ -1.24
CD44-221ENST00000526000 GPRC5CQ9NQ84 441 aa7.32□□□□□ -1.24
CD44-221ENST00000526000 XPNPEP1Q9NQW7 623 aa7.32□□□□□ -1.24
CD44-221ENST00000526000 PDRG1Q9NUG6 133 aa7.32□□□□□ -1.24
CD44-221ENST00000526000 WNT16Q9UBV4 365 aa7.32□□□□□ -1.24
CD44-221ENST00000526000 SIT1Q9Y3P8 196 aa7.32□□□□□ -1.24
CD44-221ENST00000526000 MTF2Q9Y483 593 aaPredicted RBP7.32□□□□□ -1.24
CD44-221ENST00000526000 CYP46A1Q9Y6A2 500 aa7.32□□□□□ -1.24
CD44-221ENST00000526000 NUMBLQ9Y6R0 609 aa7.32□□□□□ -1.24
CD44-221ENST00000526000 EP300Q09472 2414 aaPredicted RBP7.32□□□□□ -1.24
CD44-221ENST00000526000 CNTNAP2Q9UHC6 1331 aa7.31□□□□□ -1.24
CD44-221ENST00000526000 TTLL13PA6NNM8 815 aa7.31□□□□□ -1.24
CD44-221ENST00000526000 ADAM12O43184 909 aa7.31□□□□□ -1.24
CD44-221ENST00000526000 DKC1O60832 514 aaKnown RBP eCLIP7.31□□□□□ -1.24
CD44-221ENST00000526000 BAG4O95429 457 aaKnown RBP7.31□□□□□ -1.24
CD44-221ENST00000526000 SP9P0CG40 484 aa7.31□□□□□ -1.24
CD44-221ENST00000526000 GLULP15104 373 aa7.31□□□□□ -1.24
CD44-221ENST00000526000 ARF4P18085 180 aaPredicted RBP7.31□□□□□ -1.24
CD44-221ENST00000526000 FSHRP23945 695 aa7.31□□□□□ -1.24
CD44-221ENST00000526000 RFC5P40937 340 aa7.31□□□□□ -1.24
CD44-221ENST00000526000 TXKP42681 527 aa7.31□□□□□ -1.24
CD44-221ENST00000526000 DSG1Q02413 1049 aa7.31□□□□□ -1.24
CD44-221ENST00000526000 NR5A1Q13285 461 aa7.31□□□□□ -1.24
CD44-221ENST00000526000 PPP2R5CQ13362 524 aa7.31□□□□□ -1.24
CD44-221ENST00000526000 UBXN2BQ14CS0 331 aa7.31□□□□□ -1.24
CD44-221ENST00000526000 TMEM132AQ24JP5 1023 aa7.31□□□□□ -1.24
CD44-221ENST00000526000 USP41Q3LFD5 358 aa7.31□□□□□ -1.24
CD44-221ENST00000526000 FAM171A1Q5VUB5 890 aa7.31□□□□□ -1.24
CD44-221ENST00000526000 NOTUMQ6P988 496 aa7.31□□□□□ -1.24
CD44-221ENST00000526000 LILRA6Q6PI73 481 aa7.31□□□□□ -1.24
CD44-221ENST00000526000 CPLX2Q6PUV4 134 aaKnown RBP7.31□□□□□ -1.24
CD44-221ENST00000526000 C4orf19Q8IY42 314 aa7.31□□□□□ -1.24
CD44-221ENST00000526000 KMT2EQ8IZD2 1858 aa7.31□□□□□ -1.24
CD44-221ENST00000526000 NECAB1Q8N987 351 aa7.31□□□□□ -1.24
CD44-221ENST00000526000 CNNM3Q8NE01 707 aa7.31□□□□□ -1.24
CD44-221ENST00000526000 ITFG1Q8TB96 612 aa7.31□□□□□ -1.24
CD44-221ENST00000526000 ING5Q8WYH8 240 aa7.31□□□□□ -1.24
CD44-221ENST00000526000 FAM20AQ96MK3 541 aa7.31□□□□□ -1.24
CD44-221ENST00000526000 KXD1Q9BQD3 176 aa7.31□□□□□ -1.24
CD44-221ENST00000526000 PRKD2Q9BZL6 878 aa7.31□□□□□ -1.24
CD44-221ENST00000526000 ZSWIM4Q9H7M6 989 aa7.31□□□□□ -1.24
CD44-221ENST00000526000 KCNMB3Q9NPA1 279 aa7.31□□□□□ -1.24
CD44-221ENST00000526000 UBN1Q9NPG3 1134 aa7.31□□□□□ -1.24
CD44-221ENST00000526000 ARHGEF3Q9NR81 526 aa7.31□□□□□ -1.24
CD44-221ENST00000526000 SNTG2Q9NY99 539 aa7.31□□□□□ -1.24
CD44-221ENST00000526000 SSX2IPQ9Y2D8 614 aa7.31□□□□□ -1.24
CD44-221ENST00000526000 PLXNA3P51805 1871 aa7.3□□□□□ -1.24
CD44-221ENST00000526000 CARNS1A5YM72 827 aa7.3□□□□□ -1.24
CD44-221ENST00000526000 LRRIQ4A6NIV6 560 aa7.3□□□□□ -1.24
CD44-221ENST00000526000 FAM170BA6NMN3 283 aa7.3□□□□□ -1.24
CD44-221ENST00000526000 WNT7AO00755 349 aa7.3□□□□□ -1.24
CD44-221ENST00000526000 USO1O60763 962 aaKnown RBP7.3□□□□□ -1.24
CD44-221ENST00000526000 ZMYND10O75800 440 aa7.3□□□□□ -1.24
CD44-221ENST00000526000 SRFP11831 508 aa7.3□□□□□ -1.24
CD44-221ENST00000526000 GLRA2P23416 452 aa7.3□□□□□ -1.24
CD44-221ENST00000526000 ARL2P36404 184 aa7.3□□□□□ -1.24
CD44-221ENST00000526000 ARPP19P56211 112 aa7.3□□□□□ -1.24
CD44-221ENST00000526000 EVCP57679 992 aa7.3□□□□□ -1.24
CD44-221ENST00000526000 FOXK2Q01167 660 aa7.3□□□□□ -1.24
CD44-221ENST00000526000 CSTF1Q05048 431 aaKnown RBP7.3□□□□□ -1.24
CD44-221ENST00000526000 MBTD1Q05BQ5 628 aa7.3□□□□□ -1.24
CD44-221ENST00000526000 DSC1Q08554 894 aa7.3□□□□□ -1.24
CD44-221ENST00000526000 SCRN1Q12765 414 aa7.3□□□□□ -1.24
CD44-221ENST00000526000 HTR4Q13639 388 aa7.3□□□□□ -1.24
CD44-221ENST00000526000 CAPSQ13938 189 aa7.3□□□□□ -1.24
CD44-221ENST00000526000 TFDP1Q14186 410 aa7.3□□□□□ -1.24
CD44-221ENST00000526000 AMHR2Q16671 573 aa7.3□□□□□ -1.24
CD44-221ENST00000526000 SLC44A4Q53GD3 710 aa7.3□□□□□ -1.24
CD44-221ENST00000526000 RTP2Q5QGT7 225 aa7.3□□□□□ -1.24
CD44-221ENST00000526000 PPM1LQ5SGD2 360 aa7.3□□□□□ -1.24
CD44-221ENST00000526000 ELMSAN1Q6PJG2 1045 aa7.3□□□□□ -1.24
CD44-221ENST00000526000 TSSK4Q6SA08 328 aa7.3□□□□□ -1.24
CD44-221ENST00000526000 MOXD1Q6UVY6 613 aa7.3□□□□□ -1.24
CD44-221ENST00000526000 DGLUCYQ7Z3D6 616 aa7.3□□□□□ -1.24
CD44-221ENST00000526000 NOSTRINQ8IVI9 506 aa7.3□□□□□ -1.24
CD44-221ENST00000526000 C1orf210Q8IVY1 113 aa7.3□□□□□ -1.24
CD44-221ENST00000526000 EXOC8Q8IYI6 725 aa7.3□□□□□ -1.24
CD44-221ENST00000526000 FBXL16Q8N461 479 aa7.3□□□□□ -1.24
CD44-221ENST00000526000 DAGLBQ8NCG7 672 aa7.3□□□□□ -1.24
CD44-221ENST00000526000 GSTCDQ8NEC7 633 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms