RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 OTOFQ9HC10 1997 aa6.26□□□□□ -1.41
SVIP-202ENST00000525670 MYO3BQ8WXR4 1341 aa6.25□□□□□ -1.41
SVIP-202ENST00000525670 H7BY64 318 aa6.25□□□□□ -1.41
SVIP-202ENST00000525670 WNT10BO00744 389 aa6.25□□□□□ -1.41
SVIP-202ENST00000525670 HGSO14964 777 aaPredicted RBP6.25□□□□□ -1.41
SVIP-202ENST00000525670 CAPNS1P04632 268 aa6.25□□□□□ -1.41
SVIP-202ENST00000525670 ITGB3P05106 788 aa6.25□□□□□ -1.41
SVIP-202ENST00000525670 IFIT2P09913 472 aaKnown RBP6.25□□□□□ -1.41
SVIP-202ENST00000525670 ITGA1P56199 1179 aa6.25□□□□□ -1.41
SVIP-202ENST00000525670 ZNF280AP59817 542 aaPredicted RBP6.25□□□□□ -1.41
SVIP-202ENST00000525670 NKX3-2P78367 333 aa6.25□□□□□ -1.41
SVIP-202ENST00000525670 FSTL1Q12841 308 aa6.25□□□□□ -1.41
SVIP-202ENST00000525670 LSAMPQ13449 338 aa6.25□□□□□ -1.41
SVIP-202ENST00000525670 PICALMQ13492 652 aa6.25□□□□□ -1.41
SVIP-202ENST00000525670 PRSS53Q2L4Q9 553 aa6.25□□□□□ -1.41
SVIP-202ENST00000525670 CR1LQ2VPA4 569 aa6.25□□□□□ -1.41
SVIP-202ENST00000525670 MRM1Q6IN84 353 aaKnown RBP6.25□□□□□ -1.41
SVIP-202ENST00000525670 EEPD1Q7L9B9 569 aa6.25□□□□□ -1.41
SVIP-202ENST00000525670 STK32CQ86UX6 486 aa6.25□□□□□ -1.41
SVIP-202ENST00000525670 PPIL6Q8IXY8 311 aa6.25□□□□□ -1.41
SVIP-202ENST00000525670 TMEM145Q8NBT3 493 aa6.25□□□□□ -1.41
SVIP-202ENST00000525670 MICAL1Q8TDZ2 1067 aa6.25□□□□□ -1.41
SVIP-202ENST00000525670 DPF2Q92785 391 aa6.25□□□□□ -1.41
SVIP-202ENST00000525670 CDCA5Q96FF9 252 aa6.25□□□□□ -1.41
SVIP-202ENST00000525670 EPN3Q9H201 632 aa6.25□□□□□ -1.41
SVIP-202ENST00000525670 TDRD3Q9H7E2 651 aaKnown RBP6.25□□□□□ -1.41
SVIP-202ENST00000525670 HMG20BQ9P0W2 317 aa6.25□□□□□ -1.41
SVIP-202ENST00000525670 PCDHA2Q9Y5H9 948 aa6.25□□□□□ -1.41
SVIP-202ENST00000525670 FAM205AQ6ZU69 1335 aa6.25□□□□□ -1.41
SVIP-202ENST00000525670 SSC5DA1L4H1 1573 aa6.24□□□□□ -1.41
SVIP-202ENST00000525670 IDH1O75874 414 aaKnown RBP6.24□□□□□ -1.41
SVIP-202ENST00000525670 CHGBP05060 677 aa6.24□□□□□ -1.41
SVIP-202ENST00000525670 STAT5AP42229 794 aa6.24□□□□□ -1.41
SVIP-202ENST00000525670 TCP10Q12799 353 aa6.24□□□□□ -1.41
SVIP-202ENST00000525670 ZXDCQ2QGD7 858 aaPredicted RBP6.24□□□□□ -1.41
SVIP-202ENST00000525670 CCDC158Q5M9N0 1113 aa6.24□□□□□ -1.41
SVIP-202ENST00000525670 PRR31Q5SQ13 230 aa6.24□□□□□ -1.41
SVIP-202ENST00000525670 DENND5AQ6IQ26 1287 aa6.24□□□□□ -1.41
SVIP-202ENST00000525670 FAM124AQ86V42 546 aa6.24□□□□□ -1.41
SVIP-202ENST00000525670 SKAP1Q86WV1 359 aa6.24□□□□□ -1.41
SVIP-202ENST00000525670 ERC1Q8IUD2 1116 aa6.24□□□□□ -1.41
SVIP-202ENST00000525670 RPAP2Q8IXW5 612 aaPredicted RBP6.24□□□□□ -1.41
SVIP-202ENST00000525670 SPATA5Q8NB90 893 aa6.24□□□□□ -1.41
SVIP-202ENST00000525670 TEKT1Q969V4 418 aa6.24□□□□□ -1.41
SVIP-202ENST00000525670 KIF1BPQ96EK5 621 aa6.24□□□□□ -1.41
SVIP-202ENST00000525670 CHAMP1Q96JM3 812 aa6.24□□□□□ -1.41
SVIP-202ENST00000525670 PRMT6Q96LA8 375 aaPredicted RBP6.24□□□□□ -1.41
SVIP-202ENST00000525670 RBM15Q96T37 977 aaKnown RBP eCLIP6.24□□□□□ -1.41
SVIP-202ENST00000525670 YIPF4Q9BSR8 244 aa6.24□□□□□ -1.41
SVIP-202ENST00000525670 BOLA2Q9H3K6 86 aa6.24□□□□□ -1.41
SVIP-202ENST00000525670 PIH1D3Q9NQM4 214 aaKnown RBP6.24□□□□□ -1.41
SVIP-202ENST00000525670 FBXL7Q9UJT9 491 aa6.24□□□□□ -1.41
SVIP-202ENST00000525670 DENND2AQ9ULE3 1009 aa6.24□□□□□ -1.41
SVIP-202ENST00000525670 NOP58Q9Y2X3 529 aaKnown RBP6.24□□□□□ -1.41
SVIP-202ENST00000525670 DOCK2Q92608 1830 aa6.24□□□□□ -1.41
SVIP-202ENST00000525670 NAV1Q8NEY1 1877 aa6.24□□□□□ -1.41
SVIP-202ENST00000525670 CDK5RAP2Q96SN8 1893 aa6.24□□□□□ -1.41
SVIP-202ENST00000525670 PASKQ96RG2 1323 aa6.24□□□□□ -1.41
SVIP-202ENST00000525670 MYH7P12883 1935 aa6.23□□□□□ -1.41
SVIP-202ENST00000525670 MROH6A6NGR9 719 aa6.23□□□□□ -1.41
SVIP-202ENST00000525670 AGRPO00253 132 aa6.23□□□□□ -1.41
SVIP-202ENST00000525670 GOLIM4O00461 696 aa6.23□□□□□ -1.41
SVIP-202ENST00000525670 DDX3XO00571 662 aaKnown RBP eCLIP6.23□□□□□ -1.411e-13■■■■■ 27.6
SVIP-202ENST00000525670 TADA3O75528 432 aa6.23□□□□□ -1.41
SVIP-202ENST00000525670 GJB6O95452 261 aa6.23□□□□□ -1.41
SVIP-202ENST00000525670 LCP1P13796 627 aa6.23□□□□□ -1.41
SVIP-202ENST00000525670 BTDP43251 543 aa6.23□□□□□ -1.41
SVIP-202ENST00000525670 MAGEA10P43363 369 aaPredicted RBP6.23□□□□□ -1.41
SVIP-202ENST00000525670 MECOMQ03112 1051 aa6.23□□□□□ -1.41
SVIP-202ENST00000525670 EMC4Q5J8M3 183 aa6.23□□□□□ -1.41
SVIP-202ENST00000525670 SLC35F1Q5T1Q4 408 aa6.23□□□□□ -1.41
SVIP-202ENST00000525670 STEAP3Q658P3 488 aa6.23□□□□□ -1.41
SVIP-202ENST00000525670 MCTP2Q6DN12 878 aa6.23□□□□□ -1.41
SVIP-202ENST00000525670 CYP4F22Q6NT55 531 aa6.23□□□□□ -1.41
SVIP-202ENST00000525670 LGI4Q8N135 537 aa6.23□□□□□ -1.41
SVIP-202ENST00000525670 CLASRPQ8N2M8 674 aaKnown RBP6.23□□□□□ -1.41
SVIP-202ENST00000525670 MIGA1Q8NAN2 632 aa6.23□□□□□ -1.41
SVIP-202ENST00000525670 TXNDC5Q8NBS9 432 aaKnown RBP6.23□□□□□ -1.41
SVIP-202ENST00000525670 WDR66Q8TBY9 1149 aa6.23□□□□□ -1.41
SVIP-202ENST00000525670 TBC1D22AQ8WUA7 517 aa6.23□□□□□ -1.41
SVIP-202ENST00000525670 C1orf159Q96HA4 380 aa6.23□□□□□ -1.41
SVIP-202ENST00000525670 LRRCC1Q9C099 1032 aa6.23□□□□□ -1.41
SVIP-202ENST00000525670 TMEM39BQ9GZU3 492 aa6.23□□□□□ -1.41
SVIP-202ENST00000525670 CHMP4BQ9H444 224 aaKnown RBP6.23□□□□□ -1.41
SVIP-202ENST00000525670 ZNF70Q9UC06 446 aaPredicted RBP6.23□□□□□ -1.41
SVIP-202ENST00000525670 NPFFR2Q9Y5X5 522 aa6.23□□□□□ -1.41
SVIP-202ENST00000525670 PAPPA2Q9BXP8 1791 aa6.22□□□□□ -1.41
SVIP-202ENST00000525670 PLATP00750 562 aa6.22□□□□□ -1.41
SVIP-202ENST00000525670 IGHDP01880 384 aa6.22□□□□□ -1.41
SVIP-202ENST00000525670 FGRP09769 529 aa6.22□□□□□ -1.41
SVIP-202ENST00000525670 TCF3P15923 654 aa6.22□□□□□ -1.41
SVIP-202ENST00000525670 HUNKP57058 714 aa6.22□□□□□ -1.41
SVIP-202ENST00000525670 DYNLL1P63167 89 aaKnown RBP6.22□□□□□ -1.41
SVIP-202ENST00000525670 ARID5AQ03989 594 aa6.22□□□□□ -1.41
SVIP-202ENST00000525670 ADAM9Q13443 819 aa6.22□□□□□ -1.41
SVIP-202ENST00000525670 HSP90AB4PQ58FF6 505 aa6.22□□□□□ -1.41
SVIP-202ENST00000525670 ANKRD45Q5TZF3 282 aa6.22□□□□□ -1.41
SVIP-202ENST00000525670 CST9Q5W186 159 aa6.22□□□□□ -1.41
SVIP-202ENST00000525670 BORAQ6PGQ7 559 aa6.22□□□□□ -1.41
SVIP-202ENST00000525670 ADGRA1Q86SQ6 560 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms