RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 DTNBP1Q96EV8 351 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 KAZALD1Q96I82 304 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 RMDN2Q96LZ7 410 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 ASB16Q96NS5 453 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 FSD1Q9BTV5 496 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 BCO2Q9BYV7 579 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 AP5M1Q9H0R1 490 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 TRPV6Q9H1D0 765 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 WNT8AQ9H1J5 351 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 DNAJC18Q9H819 358 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 INCENPQ9NQS7 918 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 KRT82Q9NSB4 513 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 LRP2BPQ9P2M1 347 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 SAP30BPQ9UHR5 308 aaKnown RBP5.58□□□□□ -1.52
CD44-218ENST00000525469 DNAI1Q9UI46 699 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 ADAM21Q9UKJ8 722 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 ITGB1BP2Q9UKP3 347 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 ZNF215Q9UL58 517 aaPredicted RBP5.58□□□□□ -1.52
CD44-218ENST00000525469 SAMM50Q9Y512 469 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 NLRC5Q86WI3 1866 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 PARP14Q460N5 1801 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 MYO10Q9HD67 2058 aa5.57□□□□□ -1.52
CD44-218ENST00000525469 TRIOO75962 3097 aa5.57□□□□□ -1.52
CD44-218ENST00000525469 PDS5AQ29RF7 1337 aaKnown RBP5.57□□□□□ -1.52
CD44-218ENST00000525469 GOLGA6L7A0A1B0GV03 622 aa5.57□□□□□ -1.52
CD44-218ENST00000525469 MED19A0JLT2 244 aaPredicted RBP5.57□□□□□ -1.52
CD44-218ENST00000525469 GOLGA6L19H0YKK7 550 aa5.57□□□□□ -1.52
CD44-218ENST00000525469 STXBP3O00186 592 aa5.57□□□□□ -1.52
CD44-218ENST00000525469 EBAG9O00559 213 aa5.57□□□□□ -1.52
CD44-218ENST00000525469 ZSCAN12O43309 604 aa5.57□□□□□ -1.52
CD44-218ENST00000525469 NCK2O43639 380 aa5.57□□□□□ -1.52
CD44-218ENST00000525469 B4GALT4O60513 344 aa5.57□□□□□ -1.52
CD44-218ENST00000525469 PPFIA2O75334 1257 aa5.57□□□□□ -1.52
CD44-218ENST00000525469 BAIAP3O94812 1187 aa5.57□□□□□ -1.52
CD44-218ENST00000525469 KIAA0754O94854 1291 aa5.57□□□□□ -1.52
CD44-218ENST00000525469 TGFB1P01137 390 aa5.57□□□□□ -1.52
CD44-218ENST00000525469 AVPR2P30518 371 aa5.57□□□□□ -1.52
CD44-218ENST00000525469 SSTR4P31391 388 aa5.57□□□□□ -1.52
CD44-218ENST00000525469 MAPK8P45983 427 aa5.57□□□□□ -1.52
CD44-218ENST00000525469 LMAN1P49257 510 aa5.57□□□□□ -1.52
CD44-218ENST00000525469 BEX3Q00994 111 aa5.57□□□□□ -1.52
CD44-218ENST00000525469 CYP27A1Q02318 531 aa5.57□□□□□ -1.52
CD44-218ENST00000525469 SNW1Q13573 536 aaKnown RBP5.57□□□□□ -1.52
CD44-218ENST00000525469 CUL4AQ13619 759 aa5.57□□□□□ -1.52
CD44-218ENST00000525469 ACVR2BQ13705 512 aa5.57□□□□□ -1.52
CD44-218ENST00000525469 ELF2Q15723 593 aa5.57□□□□□ -1.52
CD44-218ENST00000525469 CCDC144BQ3MJ40 725 aa5.57□□□□□ -1.52
CD44-218ENST00000525469 GORABQ5T7V8 394 aa5.57□□□□□ -1.52
CD44-218ENST00000525469 ZSCAN25Q6NSZ9 544 aa5.57□□□□□ -1.52
CD44-218ENST00000525469 CXCL17Q6UXB2 119 aa5.57□□□□□ -1.52
CD44-218ENST00000525469 DYMQ7RTS9 669 aa5.57□□□□□ -1.52
CD44-218ENST00000525469 METTL16Q86W50 562 aaKnown RBP5.57□□□□□ -1.52
CD44-218ENST00000525469 AMOTL1Q8IY63 956 aa5.57□□□□□ -1.52
CD44-218ENST00000525469 CCDC170Q8IYT3 715 aa5.57□□□□□ -1.52
CD44-218ENST00000525469 ANKRD44Q8N8A2 993 aa5.57□□□□□ -1.52
CD44-218ENST00000525469 SHKBP1Q8TBC3 707 aa5.57□□□□□ -1.52
CD44-218ENST00000525469 GIPC2Q8TF65 315 aa5.57□□□□□ -1.52
CD44-218ENST00000525469 RABGGTAQ92696 567 aa5.57□□□□□ -1.52
CD44-218ENST00000525469 NSUN4Q96CB9 384 aaKnown RBP5.57□□□□□ -1.52
CD44-218ENST00000525469 PABPC5Q96DU9 382 aaKnown RBP5.57□□□□□ -1.52
CD44-218ENST00000525469 ANKRD27Q96NW4 1050 aa5.57□□□□□ -1.52
CD44-218ENST00000525469 TRIM56Q9BRZ2 755 aaKnown RBP5.57□□□□□ -1.52
CD44-218ENST00000525469 OSBPL1AQ9BXW6 950 aa5.57□□□□□ -1.52
CD44-218ENST00000525469 EMILIN2Q9BXX0 1053 aa5.57□□□□□ -1.52
CD44-218ENST00000525469 CEP44Q9C0F1 390 aa5.57□□□□□ -1.52
CD44-218ENST00000525469 UBA5Q9GZZ9 404 aa5.57□□□□□ -1.52
CD44-218ENST00000525469 NAT10Q9H0A0 1025 aaKnown RBP5.57□□□□□ -1.52
CD44-218ENST00000525469 UPF3AQ9H1J1 476 aaKnown RBP5.57□□□□□ -1.52
CD44-218ENST00000525469 ABHD16BQ9H3Z7 469 aa5.57□□□□□ -1.52
CD44-218ENST00000525469 VIPAS39Q9H9C1 493 aa5.57□□□□□ -1.52
CD44-218ENST00000525469 DDX19AQ9NUU7 478 aaKnown RBP5.57□□□□□ -1.52
CD44-218ENST00000525469 CLDND1Q9NY35 253 aa5.57□□□□□ -1.52
CD44-218ENST00000525469 AATFQ9NY61 560 aaKnown RBP eCLIP5.57□□□□□ -1.52
CD44-218ENST00000525469 PPM1HQ9ULR3 514 aa5.57□□□□□ -1.52
CD44-218ENST00000525469 COL4A6Q14031 1691 aa5.56□□□□□ -1.52
CD44-218ENST00000525469 TANC1Q9C0D5 1861 aa5.56□□□□□ -1.52
CD44-218ENST00000525469 FLT1P17948 1338 aa5.56□□□□□ -1.52
CD44-218ENST00000525469 KIAA1324LA8MWY0 1029 aaPredicted RBP5.56□□□□□ -1.52
CD44-218ENST00000525469 WDR64B1ANS9 1081 aa5.56□□□□□ -1.52
CD44-218ENST00000525469 CDKL5O76039 1030 aa5.56□□□□□ -1.52
CD44-218ENST00000525469 SNAI1O95863 264 aaPredicted RBP5.56□□□□□ -1.52
CD44-218ENST00000525469 DLGAP3O95886 979 aa5.56□□□□□ -1.52
CD44-218ENST00000525469 DRD2P14416 443 aa5.56□□□□□ -1.52
CD44-218ENST00000525469 RAB6AP20340 208 aa5.56□□□□□ -1.52
CD44-218ENST00000525469 ADORA1P30542 326 aa5.56□□□□□ -1.52
CD44-218ENST00000525469 STAT3P40763 770 aa5.56□□□□□ -1.52
CD44-218ENST00000525469 PEX19P40855 299 aa5.56□□□□□ -1.52
CD44-218ENST00000525469 CD151P48509 253 aa5.56□□□□□ -1.52
CD44-218ENST00000525469 ERVK-21P61565 698 aa5.56□□□□□ -1.52
CD44-218ENST00000525469 ZXDAP98168 799 aa5.56□□□□□ -1.52
CD44-218ENST00000525469 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.56□□□□□ -1.52
CD44-218ENST00000525469 ARHGAP29Q52LW3 1261 aa5.56□□□□□ -1.52
CD44-218ENST00000525469 NAA16Q6N069 864 aaPredicted RBP5.56□□□□□ -1.52
CD44-218ENST00000525469 SPRED2Q7Z698 418 aa5.56□□□□□ -1.52
CD44-218ENST00000525469 YTHDF3Q7Z739 585 aaKnown RBP5.56□□□□□ -1.52
CD44-218ENST00000525469 PLA2G4DQ86XP0 818 aa5.56□□□□□ -1.52
CD44-218ENST00000525469 RIOX2Q8IUF8 465 aa5.56□□□□□ -1.52
CD44-218ENST00000525469 SLC43A3Q8NBI5 491 aa5.56□□□□□ -1.52
CD44-218ENST00000525469 GLIS3Q8NEA6 775 aa5.56□□□□□ -1.52
CD44-218ENST00000525469 NEK11Q8NG66 645 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms