RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 AKAP9Q99996 3911 aa4.04□□□□□ -1.76
CSDE1-209ENST00000525132 A0A0G2JK05 382 aa4.04□□□□□ -1.76
CSDE1-209ENST00000525132 A0A1W2PQ45 241 aaPredicted RBP4.04□□□□□ -1.76
CSDE1-209ENST00000525132 A0A1W2PQY0 241 aa4.04□□□□□ -1.76
CSDE1-209ENST00000525132 TMEM82A0PJX8 343 aa4.04□□□□□ -1.76
CSDE1-209ENST00000525132 LINC01553A4QN01 128 aa4.04□□□□□ -1.76
CSDE1-209ENST00000525132 SIGLEC6O43699 453 aa4.04□□□□□ -1.76
CSDE1-209ENST00000525132 RAB11FIP3O75154 756 aa4.04□□□□□ -1.76
CSDE1-209ENST00000525132 CLEC3AO75596 197 aa4.04□□□□□ -1.76
CSDE1-209ENST00000525132 GLULP15104 373 aa4.04□□□□□ -1.76
CSDE1-209ENST00000525132 IBSPP21815 317 aaPredicted RBP4.04□□□□□ -1.76
CSDE1-209ENST00000525132 IL6STP40189 918 aaPredicted RBP4.04□□□□□ -1.76
CSDE1-209ENST00000525132 COASYQ13057 564 aa4.04□□□□□ -1.76
CSDE1-209ENST00000525132 NMIQ13287 307 aaPredicted RBP4.04□□□□□ -1.76
CSDE1-209ENST00000525132 RASA3Q14644 834 aa4.04□□□□□ -1.76
CSDE1-209ENST00000525132 NFE2L2Q16236 605 aa4.04□□□□□ -1.76
CSDE1-209ENST00000525132 BBS9Q3SYG4 887 aa4.04□□□□□ -1.76
CSDE1-209ENST00000525132 AXDND1Q5T1B0 1012 aaPredicted RBP4.04□□□□□ -1.76
CSDE1-209ENST00000525132 CDKAL1Q5VV42 579 aa4.04□□□□□ -1.76
CSDE1-209ENST00000525132 C1QL3Q5VWW1 255 aa4.04□□□□□ -1.76
CSDE1-209ENST00000525132 TSSK4Q6SA08 328 aa4.04□□□□□ -1.76
CSDE1-209ENST00000525132 RPUSD2Q8IZ73 545 aaKnown RBP4.04□□□□□ -1.76
CSDE1-209ENST00000525132 DAGLBQ8NCG7 672 aa4.04□□□□□ -1.76
CSDE1-209ENST00000525132 LRRN4CLQ8ND94 238 aa4.04□□□□□ -1.76
CSDE1-209ENST00000525132 MRFAP1L1Q96HT8 127 aa4.04□□□□□ -1.76
CSDE1-209ENST00000525132 ZBED3Q96IU2 234 aaPredicted RBP4.04□□□□□ -1.76
CSDE1-209ENST00000525132 ZNF512BQ96KM6 892 aaPredicted RBP4.04□□□□□ -1.76
CSDE1-209ENST00000525132 KLHL25Q9H0H3 589 aa4.04□□□□□ -1.76
CSDE1-209ENST00000525132 FLRT1Q9NZU1 646 aa4.04□□□□□ -1.76
CSDE1-209ENST00000525132 EBF1Q9UH73 591 aa4.04□□□□□ -1.76
CSDE1-209ENST00000525132 FBXO4Q9UKT5 387 aa4.04□□□□□ -1.76
CSDE1-209ENST00000525132 CTNND2Q9UQB3 1225 aa4.04□□□□□ -1.76
CSDE1-209ENST00000525132 HEMK1Q9Y5R4 338 aaPredicted RBP4.04□□□□□ -1.76
CSDE1-209ENST00000525132 RALGAPA1Q6GYQ0 2036 aa4.04□□□□□ -1.76
CSDE1-209ENST00000525132 ZNF804BA4D1E1 1349 aa4.03□□□□□ -1.76
CSDE1-209ENST00000525132 UTYO14607 1347 aa4.03□□□□□ -1.76
CSDE1-209ENST00000525132 ABCC4O15439 1325 aa4.03□□□□□ -1.76
CSDE1-209ENST00000525132 hCG_2014768A0A024R1R8 64 aa4.03□□□□□ -1.76
CSDE1-209ENST00000525132 WIPF3A6NGB9 483 aa4.03□□□□□ -1.76
CSDE1-209ENST00000525132 NOTOA8MTQ0 251 aa4.03□□□□□ -1.76
CSDE1-209ENST00000525132 WDR46O15213 610 aaKnown RBP4.03□□□□□ -1.76
CSDE1-209ENST00000525132 KLF4O43474 513 aa4.03□□□□□ -1.76
CSDE1-209ENST00000525132 BBOX1O75936 387 aa4.03□□□□□ -1.76
CSDE1-209ENST00000525132 PRAMEF1O95521 474 aa4.03□□□□□ -1.76
CSDE1-209ENST00000525132 EFEMP2O95967 443 aa4.03□□□□□ -1.76
CSDE1-209ENST00000525132 ATF7P17544 494 aaPredicted RBP4.03□□□□□ -1.76
CSDE1-209ENST00000525132 HSD3B2P26439 372 aa4.03□□□□□ -1.76
CSDE1-209ENST00000525132 GBP1P32455 592 aa4.03□□□□□ -1.76
CSDE1-209ENST00000525132 PPATQ06203 517 aa4.03□□□□□ -1.76
CSDE1-209ENST00000525132 AUHQ13825 339 aaKnown RBP4.03□□□□□ -1.76
CSDE1-209ENST00000525132 RNF180Q86T96 592 aa4.03□□□□□ -1.76
CSDE1-209ENST00000525132 JAZF1Q86VZ6 243 aa4.03□□□□□ -1.76
CSDE1-209ENST00000525132 MICAL1Q8TDZ2 1067 aa4.03□□□□□ -1.76
CSDE1-209ENST00000525132 NELL1Q92832 810 aa4.03□□□□□ -1.76
CSDE1-209ENST00000525132 UBE2FQ969M7 185 aa4.03□□□□□ -1.76
CSDE1-209ENST00000525132 WBP1Q96G27 269 aa4.03□□□□□ -1.76
CSDE1-209ENST00000525132 TRIT1Q9H3H1 467 aaKnown RBP4.03□□□□□ -1.76
CSDE1-209ENST00000525132 PHAXQ9H814 394 aaKnown RBP4.03□□□□□ -1.76
CSDE1-209ENST00000525132 CARS2Q9HA77 564 aaKnown RBP4.03□□□□□ -1.76
CSDE1-209ENST00000525132 PRDM7Q9NQW5 492 aa4.03□□□□□ -1.76
CSDE1-209ENST00000525132 FBXL21Q9UKT6 434 aa4.03□□□□□ -1.76
CSDE1-209ENST00000525132 KCNH3Q9ULD8 1083 aa4.03□□□□□ -1.76
CSDE1-209ENST00000525132 MRPL42Q9Y6G3 142 aaKnown RBP4.03□□□□□ -1.76
CSDE1-209ENST00000525132 CSPG4Q6UVK1 2322 aa4.03□□□□□ -1.77
CSDE1-209ENST00000525132 A0A1W2PP64 1363 aa4.02□□□□□ -1.77
CSDE1-209ENST00000525132 A0A1B0GUL6 1792 aa4.02□□□□□ -1.77
CSDE1-209ENST00000525132 MN1Q10571 1320 aaPredicted RBP4.02□□□□□ -1.77
CSDE1-209ENST00000525132 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.02□□□□□ -1.77
CSDE1-209ENST00000525132 LAMTOR5O43504 91 aa4.02□□□□□ -1.77
CSDE1-209ENST00000525132 ZNF205O95201 554 aa4.02□□□□□ -1.77
CSDE1-209ENST00000525132 HNRNPA1P09651 372 aaKnown RBP eCLIP4.02□□□□□ -1.77
CSDE1-209ENST00000525132 ZGLP1P0C6A0 271 aa4.02□□□□□ -1.77
CSDE1-209ENST00000525132 TPP2P29144 1249 aaPredicted RBP4.02□□□□□ -1.77
CSDE1-209ENST00000525132 ETFBP38117 255 aa4.02□□□□□ -1.77
CSDE1-209ENST00000525132 ANAPC15P60006 121 aa4.02□□□□□ -1.77
CSDE1-209ENST00000525132 NFKB2Q00653 900 aa4.02□□□□□ -1.77
CSDE1-209ENST00000525132 NFATC3Q12968 1075 aa4.02□□□□□ -1.77
CSDE1-209ENST00000525132 IKZF1Q13422 519 aa4.02□□□□□ -1.77
CSDE1-209ENST00000525132 NOLC1Q14978 699 aaKnown RBP eCLIP4.02□□□□□ -1.77
CSDE1-209ENST00000525132 FAM110CQ1W6H9 321 aa4.02□□□□□ -1.77
CSDE1-209ENST00000525132 RNF187Q5TA31 235 aaPredicted RBP4.02□□□□□ -1.77
CSDE1-209ENST00000525132 MFSD14CQ5VZR4 134 aa4.02□□□□□ -1.77
CSDE1-209ENST00000525132 MRM1Q6IN84 353 aaKnown RBP4.02□□□□□ -1.77
CSDE1-209ENST00000525132 ATG14Q6ZNE5 492 aa4.02□□□□□ -1.77
CSDE1-209ENST00000525132 PRIMA1Q86XR5 153 aa4.02□□□□□ -1.77
CSDE1-209ENST00000525132 CERS3Q8IU89 383 aa4.02□□□□□ -1.77
CSDE1-209ENST00000525132 CKAP2LQ8IYA6 745 aa4.02□□□□□ -1.77
CSDE1-209ENST00000525132 ZNF655Q8N720 491 aaPredicted RBP4.02□□□□□ -1.77
CSDE1-209ENST00000525132 FEZF2Q8TBJ5 459 aa4.02□□□□□ -1.77
CSDE1-209ENST00000525132 LINC01599Q8WXQ3 324 aa4.02□□□□□ -1.77
CSDE1-209ENST00000525132 USP6NLQ92738 828 aa4.02□□□□□ -1.77
CSDE1-209ENST00000525132 DHRS1Q96LJ7 313 aa4.02□□□□□ -1.77
CSDE1-209ENST00000525132 GP6Q9HCN6 339 aa4.02□□□□□ -1.77
CSDE1-209ENST00000525132 GPATCH2Q9NW75 528 aa4.02□□□□□ -1.77
CSDE1-209ENST00000525132 ZSWIM5Q9P217 1185 aa4.02□□□□□ -1.77
CSDE1-209ENST00000525132 MINPP1Q9UNW1 487 aa4.02□□□□□ -1.77
CSDE1-209ENST00000525132 SIT1Q9Y3P8 196 aa4.02□□□□□ -1.77
CSDE1-209ENST00000525132 PCDHAC2Q9Y5I4 1007 aa4.02□□□□□ -1.77
CSDE1-209ENST00000525132 FHOD1Q9Y613 1164 aa4.02□□□□□ -1.77
CSDE1-209ENST00000525132 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms