RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	INSL6	Q9Y581	213 aa		5.45	□□□□□ -1.54
PCM1-223	ENST00000524356	RPS6KL1	Q9Y6S9	549 aa		5.45	□□□□□ -1.54
PCM1-223	ENST00000524356	SHTN1	A0MZ66	631 aa		5.44	□□□□□ -1.54
PCM1-223	ENST00000524356	AGRP	O00253	132 aa		5.44	□□□□□ -1.54
PCM1-223	ENST00000524356	MAF	O75444	373 aa	Predicted RBP	5.44	□□□□□ -1.54
PCM1-223	ENST00000524356	MTERF2	Q49AM1	385 aa		5.44	□□□□□ -1.54
PCM1-223	ENST00000524356	TM4SF20	Q53R12	229 aa		5.44	□□□□□ -1.54
PCM1-223	ENST00000524356	SAMD3	Q8N6K7	520 aa		5.44	□□□□□ -1.54
PCM1-223	ENST00000524356	BOLL	Q8N9W6	283 aa	Known RBP	5.44	□□□□□ -1.54
PCM1-223	ENST00000524356	SUPT20H	Q8NEM7	779 aa		5.44	□□□□□ -1.54
PCM1-223	ENST00000524356	OSBP2	Q969R2	916 aa		5.44	□□□□□ -1.54
PCM1-223	ENST00000524356	LRFN3	Q9BTN0	628 aa		5.44	□□□□□ -1.54
PCM1-223	ENST00000524356	PCGF6	Q9BYE7	350 aa		5.44	□□□□□ -1.54
PCM1-223	ENST00000524356	SFMBT1	Q9UHJ3	866 aa		5.44	□□□□□ -1.54
PCM1-223	ENST00000524356	PLAA	Q9Y263	795 aa		5.44	□□□□□ -1.54
PCM1-223	ENST00000524356	RAPGEF6	Q8TEU7	1601 aa		5.44	□□□□□ -1.54
PCM1-223	ENST00000524356	CDK13	Q14004	1512 aa	Known RBP	5.43	□□□□□ -1.54
PCM1-223	ENST00000524356	KCNK3	O14649	394 aa		5.43	□□□□□ -1.54
PCM1-223	ENST00000524356	WNT9A	O14904	365 aa		5.43	□□□□□ -1.54
PCM1-223	ENST00000524356	PRODH	O43272	600 aa		5.43	□□□□□ -1.54
PCM1-223	ENST00000524356	MFAP3L	O75121	409 aa		5.43	□□□□□ -1.54
PCM1-223	ENST00000524356	KRT18	P05783	430 aa	Known RBP	5.43	□□□□□ -1.54
PCM1-223	ENST00000524356	LAG3	P18627	525 aa		5.43	□□□□□ -1.54
PCM1-223	ENST00000524356	HNRNPM	P52272	730 aa	Known RBP eCLIP	5.43	□□□□□ -1.54
PCM1-223	ENST00000524356	USP14	P54578	494 aa		5.43	□□□□□ -1.54
PCM1-223	ENST00000524356	JAM2	P57087	298 aa		5.43	□□□□□ -1.54
PCM1-223	ENST00000524356	MCL1	Q07820	350 aa		5.43	□□□□□ -1.54
PCM1-223	ENST00000524356	OS9	Q13438	667 aa	Predicted RBP	5.43	□□□□□ -1.54
PCM1-223	ENST00000524356	TCIRG1	Q13488	830 aa		5.43	□□□□□ -1.54
PCM1-223	ENST00000524356	GGT6	Q6P531	493 aa		5.43	□□□□□ -1.54
PCM1-223	ENST00000524356	SPATC1	Q76KD6	591 aa		5.43	□□□□□ -1.54
PCM1-223	ENST00000524356	EEPD1	Q7L9B9	569 aa		5.43	□□□□□ -1.54
PCM1-223	ENST00000524356	SIMC1	Q8NDZ2	872 aa		5.43	□□□□□ -1.54
PCM1-223	ENST00000524356	CHAC2	Q8WUX2	184 aa		5.43	□□□□□ -1.54
PCM1-223	ENST00000524356	ASB15	Q8WXK1	588 aa		5.43	□□□□□ -1.54
PCM1-223	ENST00000524356	SMG7	Q92540	1137 aa	Known RBP	5.43	□□□□□ -1.54
PCM1-223	ENST00000524356	GCDH	Q92947	438 aa	Predicted RBP	5.43	□□□□□ -1.54
PCM1-223	ENST00000524356	ZNF512	Q96ME7	567 aa	Predicted RBP	5.43	□□□□□ -1.54
PCM1-223	ENST00000524356	ARPC5L	Q9BPX5	153 aa		5.43	□□□□□ -1.54
PCM1-223	ENST00000524356	WDR11	Q9BZH6	1224 aa		5.43	□□□□□ -1.54
PCM1-223	ENST00000524356	ANKFY1	Q9P2R3	1169 aa		5.43	□□□□□ -1.54
PCM1-223	ENST00000524356	PFDN2	Q9UHV9	154 aa		5.43	□□□□□ -1.54
PCM1-223	ENST00000524356	CBLC	Q9ULV8	474 aa		5.43	□□□□□ -1.54
PCM1-223	ENST00000524356	EPN1	Q9Y6I3	576 aa	Predicted RBP	5.43	□□□□□ -1.54
PCM1-223	ENST00000524356	C3	P01024	1663 aa		5.43	□□□□□ -1.54
PCM1-223	ENST00000524356	KDM2B	Q8NHM5	1336 aa		5.43	□□□□□ -1.54
PCM1-223	ENST00000524356		A0A087X0B3	334 aa		5.42	□□□□□ -1.54
PCM1-223	ENST00000524356	DNAJC9-AS1	A6NH13	148 aa		5.42	□□□□□ -1.54
PCM1-223	ENST00000524356	ALG1L2	C9J202	215 aa		5.42	□□□□□ -1.54
PCM1-223	ENST00000524356	IFRD1	O00458	451 aa	Predicted RBP	5.42	□□□□□ -1.54
PCM1-223	ENST00000524356	IKBKB	O14920	756 aa		5.42	□□□□□ -1.54
PCM1-223	ENST00000524356	CLASP2	O75122	1294 aa	Known RBP	5.42	□□□□□ -1.54
PCM1-223	ENST00000524356	SCAF4	O95104	1147 aa	Known RBP	5.42	□□□□□ -1.54
PCM1-223	ENST00000524356	C1R	P00736	705 aa		5.42	□□□□□ -1.54
PCM1-223	ENST00000524356	ATF3	P18847	181 aa		5.42	□□□□□ -1.54
PCM1-223	ENST00000524356	KRT15	P19012	456 aa		5.42	□□□□□ -1.54
PCM1-223	ENST00000524356	HDAC1	Q13547	482 aa	Predicted RBP	5.42	□□□□□ -1.54
PCM1-223	ENST00000524356	MFSD5	Q6N075	450 aa		5.42	□□□□□ -1.54
PCM1-223	ENST00000524356	CCDC62	Q6P9F0	684 aa		5.42	□□□□□ -1.54
PCM1-223	ENST00000524356	C14orf80	Q86SX3	495 aa		5.42	□□□□□ -1.54
PCM1-223	ENST00000524356	SRRM1	Q8IYB3	904 aa	Known RBP	5.42	□□□□□ -1.54
PCM1-223	ENST00000524356	ZNF366	Q8N895	744 aa		5.42	□□□□□ -1.54
PCM1-223	ENST00000524356		Q8N9P0	234 aa	Predicted RBP	5.42	□□□□□ -1.54
PCM1-223	ENST00000524356	NELL1	Q92832	810 aa		5.42	□□□□□ -1.54
PCM1-223	ENST00000524356	MFSD3	Q96ES6	412 aa		5.42	□□□□□ -1.54
PCM1-223	ENST00000524356	MYEOV	Q96EZ4	313 aa		5.42	□□□□□ -1.54
PCM1-223	ENST00000524356	MAGEL2	Q9UJ55	1249 aa		5.42	□□□□□ -1.54
PCM1-223	ENST00000524356	TCOF1	Q13428	1488 aa	Known RBP	5.42	□□□□□ -1.54
PCM1-223	ENST00000524356	WASHC2C	Q9Y4E1	1318 aa		5.42	□□□□□ -1.54
PCM1-223	ENST00000524356	PTPRK	Q15262	1439 aa		5.41	□□□□□ -1.54
PCM1-223	ENST00000524356	PRAMEF22	A3QJZ6	481 aa		5.41	□□□□□ -1.54
PCM1-223	ENST00000524356	GOLGA8B	A8MQT2	603 aa		5.41	□□□□□ -1.54
PCM1-223	ENST00000524356	H2AFY	O75367	372 aa	Known RBP	5.41	□□□□□ -1.54
PCM1-223	ENST00000524356	IPO13	O94829	963 aa	Known RBP	5.41	□□□□□ -1.54
PCM1-223	ENST00000524356	GJB6	O95452	261 aa		5.41	□□□□□ -1.54
PCM1-223	ENST00000524356	MYL1	P05976	194 aa		5.41	□□□□□ -1.54
PCM1-223	ENST00000524356	MYCLP1	P12525	358 aa	Predicted RBP	5.41	□□□□□ -1.54
PCM1-223	ENST00000524356	FAM189B	P81408	668 aa		5.41	□□□□□ -1.54
PCM1-223	ENST00000524356	BRD3	Q15059	726 aa		5.41	□□□□□ -1.54
PCM1-223	ENST00000524356	VPS72	Q15906	364 aa		5.41	□□□□□ -1.54
PCM1-223	ENST00000524356	GAGE13	Q4V321	117 aa		5.41	□□□□□ -1.54
PCM1-223	ENST00000524356	RNF180	Q86T96	592 aa		5.41	□□□□□ -1.54
PCM1-223	ENST00000524356	NIM1K	Q8IY84	436 aa		5.41	□□□□□ -1.54
PCM1-223	ENST00000524356	UBR7	Q8N806	425 aa		5.41	□□□□□ -1.54
PCM1-223	ENST00000524356	SENP7	Q9BQF6	1050 aa		5.41	□□□□□ -1.54
PCM1-223	ENST00000524356	SPATA5L1	Q9BVQ7	753 aa		5.41	□□□□□ -1.54
PCM1-223	ENST00000524356	ASPSCR1	Q9BZE9	553 aa		5.41	□□□□□ -1.54
PCM1-223	ENST00000524356	ALG13	Q9NP73	1137 aa	Known RBP	5.41	□□□□□ -1.54
PCM1-223	ENST00000524356	CATSPERZ	Q9NTU4	200 aa		5.41	□□□□□ -1.54
PCM1-223	ENST00000524356	CTTNBP2	Q8WZ74	1663 aa		5.4	□□□□□ -1.54
PCM1-223	ENST00000524356	SHANK2	Q9UPX8	1470 aa		5.4	□□□□□ -1.54
PCM1-223	ENST00000524356	RASSF10	A6NK89	507 aa		5.4	□□□□□ -1.54
PCM1-223	ENST00000524356	AHRR	A9YTQ3	701 aa		5.4	□□□□□ -1.54
PCM1-223	ENST00000524356	ZNF561-AS1	K7EIQ3	104 aa		5.4	□□□□□ -1.54
PCM1-223	ENST00000524356	TRIM24	O15164	1050 aa		5.4	□□□□□ -1.54
PCM1-223	ENST00000524356	PDE8A	O60658	829 aa		5.4	□□□□□ -1.54
PCM1-223	ENST00000524356	PYGM	P11217	842 aa		5.4	□□□□□ -1.54
PCM1-223	ENST00000524356	FGFR1	P11362	822 aa		5.4	□□□□□ -1.54
PCM1-223	ENST00000524356	PABPC1	P11940	636 aa	Known RBP	5.4	□□□□□ -1.54
PCM1-223	ENST00000524356	BDNF	P23560	247 aa		5.4	□□□□□ -1.54

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms