RNA–Protein interactions for RNA: ENST00000524049.5

CCNC-218, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-218ENST00000524049 GET4Q7L5D6 327 aaPredicted RBP12.88□□□□□ -0.35
CCNC-218ENST00000524049 PALB2Q86YC2 1186 aa12.88□□□□□ -0.35
CCNC-218ENST00000524049 TRIM22Q8IYM9 498 aa12.88□□□□□ -0.35
CCNC-218ENST00000524049 RNF149Q8NC42 400 aa12.88□□□□□ -0.35
CCNC-218ENST00000524049 SMG8Q8ND04 991 aaKnown RBP12.88□□□□□ -0.35
CCNC-218ENST00000524049 GJA10Q969M2 543 aa12.88□□□□□ -0.35
CCNC-218ENST00000524049 GAD1Q99259 594 aa12.88□□□□□ -0.35
CCNC-218ENST00000524049 BCO2Q9BYV7 579 aa12.88□□□□□ -0.35
CCNC-218ENST00000524049 OSBPL6Q9BZF3 934 aa12.88□□□□□ -0.35
CCNC-218ENST00000524049 MINDY3Q9H8M7 445 aa12.88□□□□□ -0.35
CCNC-218ENST00000524049 FBXO4Q9UKT5 387 aa12.88□□□□□ -0.35
CCNC-218ENST00000524049 IPPQ9Y573 584 aa12.88□□□□□ -0.35
CCNC-218ENST00000524049 NUMBLQ9Y6R0 609 aa12.88□□□□□ -0.35
CCNC-218ENST00000524049 KANSL1LA0AUZ9 987 aa12.87□□□□□ -0.35
CCNC-218ENST00000524049 ARL5CA6NH57 179 aa12.87□□□□□ -0.35
CCNC-218ENST00000524049 ZMYND10O75800 440 aa12.87□□□□□ -0.35
CCNC-218ENST00000524049 TDP2O95551 362 aa12.87□□□□□ -0.35
CCNC-218ENST00000524049 HNRNPA1P09651 372 aaKnown RBP eCLIP12.87□□□□□ -0.35
CCNC-218ENST00000524049 FSHRP23945 695 aa12.87□□□□□ -0.35
CCNC-218ENST00000524049 NPEPPSP55786 919 aa12.87□□□□□ -0.35
CCNC-218ENST00000524049 PFKPQ01813 784 aa12.87□□□□□ -0.35
CCNC-218ENST00000524049 PRKCQQ04759 706 aa12.87□□□□□ -0.35
CCNC-218ENST00000524049 POU5F1BQ06416 359 aa12.87□□□□□ -0.35
CCNC-218ENST00000524049 MXD4Q14582 209 aaPredicted RBP12.87□□□□□ -0.35
CCNC-218ENST00000524049 FUT10Q6P4F1 479 aa12.87□□□□□ -0.35
CCNC-218ENST00000524049 MTSS1LQ765P7 747 aa12.87□□□□□ -0.35
CCNC-218ENST00000524049 FERMT3Q86UX7 667 aa12.87□□□□□ -0.35
CCNC-218ENST00000524049 C4orf19Q8IY42 314 aa12.87□□□□□ -0.35
CCNC-218ENST00000524049 BLIDQ8IZY5 108 aa12.87□□□□□ -0.35
CCNC-218ENST00000524049 SUMF1Q8NBK3 374 aa12.87□□□□□ -0.35
CCNC-218ENST00000524049 KCNB2Q92953 911 aa12.87□□□□□ -0.35
CCNC-218ENST00000524049 SECISBP2LQ93073 1101 aaKnown RBP12.87□□□□□ -0.35
CCNC-218ENST00000524049 TMEM143Q96AN5 459 aa12.87□□□□□ -0.35
CCNC-218ENST00000524049 AGXT2Q9BYV1 514 aa12.87□□□□□ -0.35
CCNC-218ENST00000524049 CSRNP2Q9H175 543 aa12.87□□□□□ -0.35
CCNC-218ENST00000524049 DDX25Q9UHL0 483 aaKnown RBP12.87□□□□□ -0.35
CCNC-218ENST00000524049 CDH7Q9ULB5 785 aa12.87□□□□□ -0.35
CCNC-218ENST00000524049 ZMYM2Q9UBW7 1377 aa12.86□□□□□ -0.35
CCNC-218ENST00000524049 M0R2N6 131 aa12.86□□□□□ -0.35
CCNC-218ENST00000524049 LAMTOR5O43504 91 aa12.86□□□□□ -0.35
CCNC-218ENST00000524049 SPATA31D3P0C874 917 aa12.86□□□□□ -0.35
CCNC-218ENST00000524049 MLH1P40692 756 aa12.86□□□□□ -0.35
CCNC-218ENST00000524049 SCNN1GP51170 649 aa12.86□□□□□ -0.35
CCNC-218ENST00000524049 EVCP57679 992 aa12.86□□□□□ -0.35
CCNC-218ENST00000524049 GPC5P78333 572 aa12.86□□□□□ -0.35
CCNC-218ENST00000524049 SSRP1Q08945 709 aaKnown RBP12.86□□□□□ -0.35
CCNC-218ENST00000524049 TFDP1Q14186 410 aa12.86□□□□□ -0.35
CCNC-218ENST00000524049 EPHA7Q15375 998 aa12.86□□□□□ -0.35
CCNC-218ENST00000524049 VARS2Q5ST30 1063 aaKnown RBP12.86□□□□□ -0.35
CCNC-218ENST00000524049 SPATA31D4Q6ZUB0 917 aa12.86□□□□□ -0.35
CCNC-218ENST00000524049 KRT25Q7Z3Z0 450 aa12.86□□□□□ -0.35
CCNC-218ENST00000524049 IFNLR1Q8IU57 520 aaPredicted RBP12.86□□□□□ -0.35
CCNC-218ENST00000524049 DAGLBQ8NCG7 672 aa12.86□□□□□ -0.35
CCNC-218ENST00000524049 NELL2Q99435 816 aa12.86□□□□□ -0.35
CCNC-218ENST00000524049 NAP1L4Q99733 375 aaKnown RBP12.86□□□□□ -0.35
CCNC-218ENST00000524049 TRIM6Q9C030 488 aaPredicted RBP12.86□□□□□ -0.35
CCNC-218ENST00000524049 SLKQ9H2G2 1235 aaPredicted RBP12.86□□□□□ -0.35
CCNC-218ENST00000524049 ADAM28Q9UKQ2 775 aa12.86□□□□□ -0.35
CCNC-218ENST00000524049 PCDHGA2Q9Y5H1 932 aa12.86□□□□□ -0.35
CCNC-218ENST00000524049 PRR5-ARHGAP8B1AHC4 643 aa12.85□□□□□ -0.35
CCNC-218ENST00000524049 EML1O00423 815 aa12.85□□□□□ -0.35
CCNC-218ENST00000524049 TBX3O15119 743 aa12.85□□□□□ -0.35
CCNC-218ENST00000524049 NCAM2O15394 837 aa12.85□□□□□ -0.35
CCNC-218ENST00000524049 TSPAN1O60635 241 aa12.85□□□□□ -0.35
CCNC-218ENST00000524049 TADA2AO75478 443 aa12.85□□□□□ -0.35
CCNC-218ENST00000524049 DEXIO95424 95 aa12.85□□□□□ -0.35
CCNC-218ENST00000524049 MYBP10242 640 aa12.85□□□□□ -0.35
CCNC-218ENST00000524049 GLULP15104 373 aa12.85□□□□□ -0.35
CCNC-218ENST00000524049 GCFC2P16383 781 aaKnown RBP12.85□□□□□ -0.35
CCNC-218ENST00000524049 PSMA5P28066 241 aa12.85□□□□□ -0.35
CCNC-218ENST00000524049 HOXA9P31269 272 aa12.85□□□□□ -0.35
CCNC-218ENST00000524049 YWHABP31946 246 aaKnown RBP12.85□□□□□ -0.35
CCNC-218ENST00000524049 PTENP60484 403 aa12.85□□□□□ -0.35
CCNC-218ENST00000524049 ARHGAP8P85298 464 aa12.85□□□□□ -0.35
CCNC-218ENST00000524049 GRIK3Q13003 919 aa12.85□□□□□ -0.35
CCNC-218ENST00000524049 RSPO4Q2I0M5 234 aaPredicted RBP12.85□□□□□ -0.35
CCNC-218ENST00000524049 LIN9Q5TKA1 542 aa12.85□□□□□ -0.35
CCNC-218ENST00000524049 PPP4R3AQ6IN85 833 aa12.85□□□□□ -0.35
CCNC-218ENST00000524049 RTL10Q7L3V2 364 aa12.85□□□□□ -0.35
CCNC-218ENST00000524049 MAML2Q8IZL2 1156 aaPredicted RBP12.85□□□□□ -0.35
CCNC-218ENST00000524049 ATRIPQ8WXE1 791 aa12.85□□□□□ -0.35
CCNC-218ENST00000524049 JAKMIP1Q96N16 626 aaKnown RBP12.85□□□□□ -0.35
CCNC-218ENST00000524049 MTRQ99707 1265 aa12.85□□□□□ -0.35
CCNC-218ENST00000524049 DDX23Q9BUQ8 820 aaKnown RBP12.85□□□□□ -0.35
CCNC-218ENST00000524049 EIF2AQ9BY44 585 aaKnown RBP12.85□□□□□ -0.35
CCNC-218ENST00000524049 GPR62Q9BZJ7 368 aa12.85□□□□□ -0.35
CCNC-218ENST00000524049 FOXQ1Q9C009 403 aa12.85□□□□□ -0.35
CCNC-218ENST00000524049 SPATA6Q9NWH7 488 aaPredicted RBP12.85□□□□□ -0.35
CCNC-218ENST00000524049 MIOSQ9NXC5 875 aa12.85□□□□□ -0.35
CCNC-218ENST00000524049 NCDNQ9UBB6 729 aa12.85□□□□□ -0.35
CCNC-218ENST00000524049 DAXXQ9UER7 740 aaPredicted RBP12.85□□□□□ -0.35
CCNC-218ENST00000524049 XYLBO75191 536 aa12.84□□□□□ -0.35
CCNC-218ENST00000524049 POU2F2P09086 479 aa12.84□□□□□ -0.35
CCNC-218ENST00000524049 CPA1P15085 419 aa12.84□□□□□ -0.35
CCNC-218ENST00000524049 RPS6KB1P23443 525 aa12.84□□□□□ -0.35
CCNC-218ENST00000524049 PDIA3P30101 505 aaKnown RBP12.84□□□□□ -0.35
CCNC-218ENST00000524049 SNW1Q13573 536 aaKnown RBP12.84□□□□□ -0.35
CCNC-218ENST00000524049 EMC2Q15006 297 aa12.84□□□□□ -0.35
CCNC-218ENST00000524049 MLF2Q15773 248 aaPredicted RBP12.84□□□□□ -0.35
CCNC-218ENST00000524049 SLC44A4Q53GD3 710 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms