RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 ZP2Q05996 745 aa19■□□□□ 0.63
CCNC-213ENST00000523541 DSC1Q08554 894 aa19■□□□□ 0.63
CCNC-213ENST00000523541 DCAF4L1Q3SXM0 396 aa19■□□□□ 0.63
CCNC-213ENST00000523541 TMEM119Q4V9L6 283 aa19■□□□□ 0.63
CCNC-213ENST00000523541 COLGALT2Q8IYK4 626 aa19■□□□□ 0.63
CCNC-213ENST00000523541 GPR65Q8IYL9 337 aa19■□□□□ 0.63
CCNC-213ENST00000523541 SMRP1Q8NCR6 262 aa19■□□□□ 0.63
CCNC-213ENST00000523541 SPIRE2Q8WWL2 714 aa19■□□□□ 0.63
CCNC-213ENST00000523541 PNMA5Q96PV4 448 aa19■□□□□ 0.63
CCNC-213ENST00000523541 APOL5Q9BWW9 433 aa19■□□□□ 0.63
CCNC-213ENST00000523541 ZBP1Q9H171 429 aa19■□□□□ 0.63
CCNC-213ENST00000523541 NXF3Q9H4D5 531 aaKnown RBP19■□□□□ 0.63
CCNC-213ENST00000523541 PDZD7Q9H5P4 517 aa19■□□□□ 0.63
CCNC-213ENST00000523541 DNAJB4Q9UDY4 337 aa19■□□□□ 0.63
CCNC-213ENST00000523541 HES2Q9Y543 173 aa19■□□□□ 0.63
CCNC-213ENST00000523541 CCDC169A6NNP5 214 aa18.99■□□□□ 0.63
CCNC-213ENST00000523541 H0YCG3 227 aa18.99■□□□□ 0.63
CCNC-213ENST00000523541 GLP2RO95838 553 aa18.99■□□□□ 0.63
CCNC-213ENST00000523541 PLA2G4BP0C869 781 aa18.99■□□□□ 0.63
CCNC-213ENST00000523541 MLH1P40692 756 aa18.99■□□□□ 0.63
CCNC-213ENST00000523541 AFF1P51825 1210 aaKnown RBP18.99■□□□□ 0.63
CCNC-213ENST00000523541 SLC12A3P55017 1021 aa18.99■□□□□ 0.63
CCNC-213ENST00000523541 PEX3P56589 373 aa18.99■□□□□ 0.63
CCNC-213ENST00000523541 GRIK3Q13003 919 aa18.99■□□□□ 0.63
CCNC-213ENST00000523541 TMEM31Q5JXX7 168 aa18.99■□□□□ 0.63
CCNC-213ENST00000523541 KCNK18Q7Z418 384 aa18.99■□□□□ 0.63
CCNC-213ENST00000523541 PPFIBP1Q86W92 1011 aa18.99■□□□□ 0.63
CCNC-213ENST00000523541 DAW1Q8N136 415 aa18.99■□□□□ 0.63
CCNC-213ENST00000523541 CASP10Q92851 521 aa18.99■□□□□ 0.63
CCNC-213ENST00000523541 KHSRPQ92945 711 aaKnown RBP eCLIP18.99■□□□□ 0.632e-6■■■■□ 20.7
CCNC-213ENST00000523541 KCNN1Q92952 543 aa18.99■□□□□ 0.63
CCNC-213ENST00000523541 COLEC11Q9BWP8 271 aa18.99■□□□□ 0.63
CCNC-213ENST00000523541 KMT5AQ9NQR1 393 aa18.99■□□□□ 0.63
CCNC-213ENST00000523541 ARHGAP28Q9P2N2 729 aa18.99■□□□□ 0.63
CCNC-213ENST00000523541 TNFSF13BQ9Y275 285 aa18.99■□□□□ 0.63
CCNC-213ENST00000523541 GTF3C3Q9Y5Q9 886 aa18.99■□□□□ 0.63
CCNC-213ENST00000523541 SPDYE4A6NLX3 237 aa18.98■□□□□ 0.63
CCNC-213ENST00000523541 C1RP00736 705 aa18.98■□□□□ 0.63
CCNC-213ENST00000523541 ALADP13716 330 aa18.98■□□□□ 0.63
CCNC-213ENST00000523541 PLS3P13797 630 aa18.98■□□□□ 0.63
CCNC-213ENST00000523541 ZRSR1Q15695 479 aaKnown RBP18.98■□□□□ 0.63
CCNC-213ENST00000523541 ATF7IP2Q5U623 682 aa18.98■□□□□ 0.63
CCNC-213ENST00000523541 CDR2LQ86X02 465 aaPredicted RBP18.98■□□□□ 0.63
CCNC-213ENST00000523541 GSTCDQ8NEC7 633 aa18.98■□□□□ 0.63
CCNC-213ENST00000523541 RPS6KC1Q96S38 1066 aa18.98■□□□□ 0.63
CCNC-213ENST00000523541 RUSC1Q9BVN2 902 aa18.98■□□□□ 0.63
CCNC-213ENST00000523541 CCSER1Q9C0I3 900 aa18.98■□□□□ 0.63
CCNC-213ENST00000523541 LARSQ9P2J5 1176 aaKnown RBP18.98■□□□□ 0.63
CCNC-213ENST00000523541 PARP2Q9UGN5 583 aa18.98■□□□□ 0.63
CCNC-213ENST00000523541 ODF2LQ9ULJ1 636 aa18.98■□□□□ 0.63
CCNC-213ENST00000523541 USP15Q9Y4E8 981 aaPredicted RBP18.98■□□□□ 0.63
CCNC-213ENST00000523541 FAM86C2PA6NEL3 165 aa18.97■□□□□ 0.63
CCNC-213ENST00000523541 C19orf67A6NJJ6 358 aa18.97■□□□□ 0.63
CCNC-213ENST00000523541 STX6O43752 255 aa18.97■□□□□ 0.63
CCNC-213ENST00000523541 SSBP05455 408 aaKnown RBP eCLIP18.97■□□□□ 0.63
CCNC-213ENST00000523541 AKAP5P24588 427 aa18.97■□□□□ 0.63
CCNC-213ENST00000523541 ABCD1P33897 745 aa18.97■□□□□ 0.63
CCNC-213ENST00000523541 OR1G1P47890 313 aa18.97■□□□□ 0.63
CCNC-213ENST00000523541 SCNN1GP51170 649 aa18.97■□□□□ 0.63
CCNC-213ENST00000523541 RESTQ13127 1097 aa18.97■□□□□ 0.63
CCNC-213ENST00000523541 MAPK7Q13164 816 aa18.97■□□□□ 0.63
CCNC-213ENST00000523541 TPRNQ4KMQ1 711 aa18.97■□□□□ 0.63
CCNC-213ENST00000523541 NT5DC1Q5TFE4 455 aa18.97■□□□□ 0.63
CCNC-213ENST00000523541 TMEM173Q86WV6 379 aaPredicted RBP18.97■□□□□ 0.63
CCNC-213ENST00000523541 AUTS2Q8WXX7 1259 aa18.97■□□□□ 0.63
CCNC-213ENST00000523541 ZFP42Q96MM3 310 aa18.97■□□□□ 0.63
CCNC-213ENST00000523541 MRPL4Q9BYD3 311 aaKnown RBP18.97■□□□□ 0.63
CCNC-213ENST00000523541 MIOSQ9NXC5 875 aa18.97■□□□□ 0.63
CCNC-213ENST00000523541 SRPRBQ9Y5M8 271 aaKnown RBP18.97■□□□□ 0.63
CCNC-213ENST00000523541 EFEMP2O95967 443 aa18.96■□□□□ 0.63
CCNC-213ENST00000523541 SOD2P04179 222 aa18.96■□□□□ 0.63
CCNC-213ENST00000523541 DDIT3P35638 169 aa18.96■□□□□ 0.63
CCNC-213ENST00000523541 PTPAQ15257 358 aa18.96■□□□□ 0.63
CCNC-213ENST00000523541 ANKRD54Q6NXT1 300 aa18.96■□□□□ 0.63
CCNC-213ENST00000523541 VN1R2Q8NFZ6 395 aa18.96■□□□□ 0.63
CCNC-213ENST00000523541 ACO2Q99798 780 aaKnown RBP18.96■□□□□ 0.63
CCNC-213ENST00000523541 EMILIN2Q9BXX0 1053 aa18.96■□□□□ 0.63
CCNC-213ENST00000523541 POLD4Q9HCU8 107 aa18.96■□□□□ 0.63
CCNC-213ENST00000523541 PTPRHQ9HD43 1115 aa18.96■□□□□ 0.63
CCNC-213ENST00000523541 MRPL17Q9NRX2 175 aaKnown RBP18.96■□□□□ 0.63
CCNC-213ENST00000523541 MTMR6Q9Y217 621 aa18.96■□□□□ 0.63
CCNC-213ENST00000523541 PRG3Q9Y2Y8 225 aaPredicted RBP18.96■□□□□ 0.63
CCNC-213ENST00000523541 TTLL13PA6NNM8 815 aa18.95■□□□□ 0.62
CCNC-213ENST00000523541 PI4K2BG5E9Z4 385 aa18.95■□□□□ 0.62
CCNC-213ENST00000523541 DCXO43602 365 aa18.95■□□□□ 0.62
CCNC-213ENST00000523541 B4GALT3O60512 393 aa18.95■□□□□ 0.62
CCNC-213ENST00000523541 LILRB3O75022 631 aa18.95■□□□□ 0.62
CCNC-213ENST00000523541 CLASP2O75122 1294 aaKnown RBP18.95■□□□□ 0.62
CCNC-213ENST00000523541 THP07101 528 aa18.95■□□□□ 0.62
CCNC-213ENST00000523541 ITIH3Q06033 890 aa18.95■□□□□ 0.62
CCNC-213ENST00000523541 STRN3Q13033 797 aa18.95■□□□□ 0.62
CCNC-213ENST00000523541 TUSC3Q13454 348 aa18.95■□□□□ 0.62
CCNC-213ENST00000523541 HSCBQ8IWL3 235 aa18.95■□□□□ 0.62
CCNC-213ENST00000523541 BCL7CQ8WUZ0 217 aaPredicted RBP18.95■□□□□ 0.62
CCNC-213ENST00000523541 RPGRIP1Q96KN7 1286 aa18.95■□□□□ 0.62
CCNC-213ENST00000523541 KIFC3Q9BVG8 833 aa18.95■□□□□ 0.62
CCNC-213ENST00000523541 S1PR5Q9H228 398 aa18.95■□□□□ 0.62
CCNC-213ENST00000523541 DZANK1Q9NVP4 752 aa18.95■□□□□ 0.62
CCNC-213ENST00000523541 SNTG2Q9NY99 539 aa18.95■□□□□ 0.62
CCNC-213ENST00000523541 CCDC39Q9UFE4 941 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms