RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 ADAMTS10Q9H324 1103 aa10.18□□□□□ -0.78
SDCBP-212ENST00000523483 PHF24Q9UPV7 400 aa10.18□□□□□ -0.78
SDCBP-212ENST00000523483 TSPAN1O60635 241 aa10.17□□□□□ -0.78
SDCBP-212ENST00000523483 CHRNA1P02708 482 aa10.17□□□□□ -0.78
SDCBP-212ENST00000523483 TRIM21P19474 475 aaKnown RBP10.17□□□□□ -0.78
SDCBP-212ENST00000523483 TLE2Q04725 743 aa10.17□□□□□ -0.78
SDCBP-212ENST00000523483 VWA3BQ502W6 1294 aa10.17□□□□□ -0.78
SDCBP-212ENST00000523483 TMEM192Q8IY95 271 aa10.17□□□□□ -0.78
SDCBP-212ENST00000523483 HAPLN2Q9GZV7 340 aa10.17□□□□□ -0.78
SDCBP-212ENST00000523483 FZD8Q9H461 694 aa10.17□□□□□ -0.78
SDCBP-212ENST00000523483 INTS13Q9NVM9 706 aa10.17□□□□□ -0.78
SDCBP-212ENST00000523483 TRPV2Q9Y5S1 764 aa10.17□□□□□ -0.78
SDCBP-212ENST00000523483 GOLGA6L6A8MZA4 724 aa10.17□□□□□ -0.78
SDCBP-212ENST00000523483 ABCD1P33897 745 aa10.17□□□□□ -0.78
SDCBP-212ENST00000523483 CRYBB1P53674 252 aaPredicted RBP10.17□□□□□ -0.78
SDCBP-212ENST00000523483 APBA1Q02410 837 aa10.17□□□□□ -0.78
SDCBP-212ENST00000523483 BFSP1Q12934 665 aa10.17□□□□□ -0.78
SDCBP-212ENST00000523483 ENOX2Q16206 610 aaKnown RBP10.17□□□□□ -0.78
SDCBP-212ENST00000523483 MPZL3Q6UWV2 235 aa10.17□□□□□ -0.78
SDCBP-212ENST00000523483 SRGAP1Q7Z6B7 1085 aa10.17□□□□□ -0.78
SDCBP-212ENST00000523483 CCDC113Q9H0I3 377 aa10.17□□□□□ -0.78
SDCBP-212ENST00000523483 PARP2Q9UGN5 583 aa10.17□□□□□ -0.78
SDCBP-212ENST00000523483 LIMA1Q9UHB6 759 aaKnown RBP10.17□□□□□ -0.78
SDCBP-212ENST00000523483 ST3GAL5Q9UNP4 418 aa10.17□□□□□ -0.78
SDCBP-212ENST00000523483 SCN10AQ9Y5Y9 1956 aa10.17□□□□□ -0.78
SDCBP-212ENST00000523483 CXCL8P10145 99 aa10.16□□□□□ -0.78
SDCBP-212ENST00000523483 AKAP5P24588 427 aa10.16□□□□□ -0.78
SDCBP-212ENST00000523483 VAMP7P51809 220 aa10.16□□□□□ -0.78
SDCBP-212ENST00000523483 TFAMQ00059 246 aaKnown RBP10.16□□□□□ -0.78
SDCBP-212ENST00000523483 CCDC173Q0VFZ6 552 aa10.16□□□□□ -0.78
SDCBP-212ENST00000523483 PAK2Q13177 524 aa10.16□□□□□ -0.78
SDCBP-212ENST00000523483 SARM1Q6SZW1 724 aa10.16□□□□□ -0.78
SDCBP-212ENST00000523483 ZPBP2Q6X784 338 aa10.16□□□□□ -0.78
SDCBP-212ENST00000523483 SCLYQ96I15 445 aa10.16□□□□□ -0.78
SDCBP-212ENST00000523483 EIF2AQ9BY44 585 aaKnown RBP10.16□□□□□ -0.78
SDCBP-212ENST00000523483 CDT1Q9H211 546 aa10.16□□□□□ -0.78
SDCBP-212ENST00000523483 METTL14Q9HCE5 456 aaKnown RBP10.16□□□□□ -0.78
SDCBP-212ENST00000523483 KLK14Q9P0G3 267 aa10.16□□□□□ -0.78
SDCBP-212ENST00000523483 DCDC2CA8MYV0 355 aa10.16□□□□□ -0.78
SDCBP-212ENST00000523483 EN2P19622 333 aaPredicted RBP10.16□□□□□ -0.78
SDCBP-212ENST00000523483 CDC42EP1Q00587 391 aa10.16□□□□□ -0.78
SDCBP-212ENST00000523483 GLRA4Q5JXX5 417 aa10.16□□□□□ -0.78
SDCBP-212ENST00000523483 NOTUMQ6P988 496 aa10.16□□□□□ -0.78
SDCBP-212ENST00000523483 INTS8Q75QN2 995 aaKnown RBP10.16□□□□□ -0.78
SDCBP-212ENST00000523483 CCDC186Q7Z3E2 898 aa10.16□□□□□ -0.78
SDCBP-212ENST00000523483 DEFB128Q7Z7B8 93 aa10.16□□□□□ -0.78
SDCBP-212ENST00000523483 NME8Q8N427 588 aa10.16□□□□□ -0.78
SDCBP-212ENST00000523483 DHX38Q92620 1227 aaKnown RBP10.16□□□□□ -0.78
SDCBP-212ENST00000523483 ARMC5Q96C12 935 aa10.16□□□□□ -0.78
SDCBP-212ENST00000523483 AGO3Q9H9G7 860 aaKnown RBP10.16□□□□□ -0.78
SDCBP-212ENST00000523483 UMODL1Q5DID0 1318 aa10.16□□□□□ -0.78
SDCBP-212ENST00000523483 A0A1B0GTH6 734 aa10.16□□□□□ -0.78
SDCBP-212ENST00000523483 LGALS16A8MUM7 142 aa10.16□□□□□ -0.78
SDCBP-212ENST00000523483 PHACTR2O75167 634 aa10.16□□□□□ -0.78
SDCBP-212ENST00000523483 AFPP02771 609 aaKnown RBP10.16□□□□□ -0.78
SDCBP-212ENST00000523483 CKBP12277 381 aa10.16□□□□□ -0.78
SDCBP-212ENST00000523483 ZSCAN20P17040 1043 aaPredicted RBP10.16□□□□□ -0.78
SDCBP-212ENST00000523483 GJA8P48165 433 aa10.16□□□□□ -0.78
SDCBP-212ENST00000523483 ARID5BQ14865 1188 aa10.16□□□□□ -0.78
SDCBP-212ENST00000523483 FAM228AQ86W67 206 aa10.16□□□□□ -0.78
SDCBP-212ENST00000523483 PPFIBP1Q86W92 1011 aa10.16□□□□□ -0.78
SDCBP-212ENST00000523483 PDZD7Q9H5P4 517 aa10.16□□□□□ -0.78
SDCBP-212ENST00000523483 RTN4Q9NQC3 1192 aaKnown RBP10.16□□□□□ -0.78
SDCBP-212ENST00000523483 A0A0B4J269 797 aa10.15□□□□□ -0.78
SDCBP-212ENST00000523483 FAM170AA1A519 330 aa10.15□□□□□ -0.78
SDCBP-212ENST00000523483 EXTL3O43909 919 aa10.15□□□□□ -0.78
SDCBP-212ENST00000523483 KRT19P08727 400 aa10.15□□□□□ -0.78
SDCBP-212ENST00000523483 GARTP22102 1010 aa10.15□□□□□ -0.78
SDCBP-212ENST00000523483 PTK7Q13308 1070 aa10.15□□□□□ -0.78
SDCBP-212ENST00000523483 FRMD5Q7Z6J6 570 aa10.15□□□□□ -0.78
SDCBP-212ENST00000523483 TRIM59Q8IWR1 403 aa10.15□□□□□ -0.78
SDCBP-212ENST00000523483 SLC35C1Q96A29 364 aa10.15□□□□□ -0.78
SDCBP-212ENST00000523483 PRIMPOLQ96LW4 560 aa10.15□□□□□ -0.78
SDCBP-212ENST00000523483 NXF3Q9H4D5 531 aaKnown RBP10.15□□□□□ -0.78
SDCBP-212ENST00000523483 RPF1Q9H9Y2 349 aaKnown RBP10.15□□□□□ -0.78
SDCBP-212ENST00000523483 NLRC4Q9NPP4 1024 aa10.15□□□□□ -0.78
SDCBP-212ENST00000523483 SNTG2Q9NY99 539 aa10.15□□□□□ -0.78
SDCBP-212ENST00000523483 PADI3Q9ULW8 664 aa10.15□□□□□ -0.78
SDCBP-212ENST00000523483 RANBP2P49792 3224 aaKnown RBP10.15□□□□□ -0.78
SDCBP-212ENST00000523483 CNTNAP2Q9UHC6 1331 aa10.15□□□□□ -0.78
SDCBP-212ENST00000523483 OGTO15294 1046 aa10.15□□□□□ -0.78
SDCBP-212ENST00000523483 TLR3O15455 904 aaKnown RBP10.15□□□□□ -0.78
SDCBP-212ENST00000523483 STAG3L1P0CL83 205 aa10.15□□□□□ -0.78
SDCBP-212ENST00000523483 ADKP55263 362 aaKnown RBP10.15□□□□□ -0.78
SDCBP-212ENST00000523483 NR1I3Q14994 352 aa10.15□□□□□ -0.78
SDCBP-212ENST00000523483 AMHR2Q16671 573 aa10.15□□□□□ -0.78
SDCBP-212ENST00000523483 MIIPQ5JXC2 388 aa10.15□□□□□ -0.78
SDCBP-212ENST00000523483 SPECC1LQ69YQ0 1117 aa10.15□□□□□ -0.78
SDCBP-212ENST00000523483 TSHZ1Q6ZSZ6 1077 aa10.15□□□□□ -0.78
SDCBP-212ENST00000523483 APTXQ7Z2E3 356 aaKnown RBP10.15□□□□□ -0.78
SDCBP-212ENST00000523483 SESTD1Q86VW0 696 aa10.15□□□□□ -0.78
SDCBP-212ENST00000523483 MRFAP1L1Q96HT8 127 aa10.15□□□□□ -0.78
SDCBP-212ENST00000523483 HIPK3Q9H422 1215 aa10.15□□□□□ -0.78
SDCBP-212ENST00000523483 GCNT4Q9P109 453 aa10.15□□□□□ -0.78
SDCBP-212ENST00000523483 SLC16A3O15427 465 aaKnown RBP10.15□□□□□ -0.79
SDCBP-212ENST00000523483 CYP2C18P33260 490 aa10.15□□□□□ -0.79
SDCBP-212ENST00000523483 MXI1P50539 228 aa10.15□□□□□ -0.79
SDCBP-212ENST00000523483 NKX3-2P78367 333 aa10.15□□□□□ -0.79
SDCBP-212ENST00000523483 ARID5AQ03989 594 aa10.15□□□□□ -0.79
SDCBP-212ENST00000523483 CBWD6Q4V339 395 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms