RNA–Protein interactions for RNA: ENST00000523055.5

PCM1-218, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-218ENST00000523055 MXD4Q14582 209 aaPredicted RBP16.7■□□□□ 0.26
PCM1-218ENST00000523055 KIAA1841Q6NSI8 718 aa16.7■□□□□ 0.26
PCM1-218ENST00000523055 FAM173BQ6P4H8 233 aa16.7■□□□□ 0.26
PCM1-218ENST00000523055 KCNK18Q7Z418 384 aa16.7■□□□□ 0.26
PCM1-218ENST00000523055 TDRD5Q8NAT2 981 aaKnown RBP16.7■□□□□ 0.26
PCM1-218ENST00000523055 DTWD2Q8NBA8 298 aa16.7■□□□□ 0.26
PCM1-218ENST00000523055 HELQQ8TDG4 1101 aa16.7■□□□□ 0.26
PCM1-218ENST00000523055 TMEM117Q9H0C3 514 aa16.7■□□□□ 0.26
PCM1-218ENST00000523055 BHMT2Q9H2M3 363 aa16.7■□□□□ 0.26
PCM1-218ENST00000523055 CHST12Q9NRB3 414 aa16.7■□□□□ 0.26
PCM1-218ENST00000523055 FAM105AQ9NUU6 356 aa16.7■□□□□ 0.26
PCM1-218ENST00000523055 ARHGEF35A5YM69 484 aa16.7■□□□□ 0.26
PCM1-218ENST00000523055 E9PMD0 336 aa16.7■□□□□ 0.26
PCM1-218ENST00000523055 INO80B-WBP1J3KQ70 363 aa16.7■□□□□ 0.26
PCM1-218ENST00000523055 TSPAN1O60635 241 aa16.7■□□□□ 0.26
PCM1-218ENST00000523055 GRIN1Q05586 938 aa16.7■□□□□ 0.26
PCM1-218ENST00000523055 RARS2Q5T160 578 aaKnown RBP16.7■□□□□ 0.26
PCM1-218ENST00000523055 DGLUCYQ7Z3D6 616 aa16.7■□□□□ 0.26
PCM1-218ENST00000523055 SLC39A11Q8N1S5 342 aa16.7■□□□□ 0.26
PCM1-218ENST00000523055 INTS4Q96HW7 963 aaKnown RBP16.7■□□□□ 0.26
PCM1-218ENST00000523055 CPB2Q96IY4 423 aa16.7■□□□□ 0.26
PCM1-218ENST00000523055 RAB34Q9BZG1 259 aa16.7■□□□□ 0.26
PCM1-218ENST00000523055 LRRIQ4A6NIV6 560 aa16.69■□□□□ 0.26
PCM1-218ENST00000523055 B4GALT5O43286 388 aa16.69■□□□□ 0.26
PCM1-218ENST00000523055 EOMESO95936 686 aa16.69■□□□□ 0.26
PCM1-218ENST00000523055 RESTQ13127 1097 aa16.69■□□□□ 0.26
PCM1-218ENST00000523055 TFDP1Q14186 410 aa16.69■□□□□ 0.26
PCM1-218ENST00000523055 ZRSR1Q15695 479 aaKnown RBP16.69■□□□□ 0.26
PCM1-218ENST00000523055 AMHR2Q16671 573 aa16.69■□□□□ 0.26
PCM1-218ENST00000523055 UBXN11Q5T124 520 aa16.69■□□□□ 0.26
PCM1-218ENST00000523055 KRT79Q5XKE5 535 aa16.69■□□□□ 0.26
PCM1-218ENST00000523055 BRAPQ7Z569 592 aa16.69■□□□□ 0.26
PCM1-218ENST00000523055 CDR2LQ86X02 465 aaPredicted RBP16.69■□□□□ 0.26
PCM1-218ENST00000523055 IFNLR1Q8IU57 520 aaPredicted RBP16.69■□□□□ 0.26
PCM1-218ENST00000523055 ABI1Q8IZP0 508 aa16.69■□□□□ 0.26
PCM1-218ENST00000523055 PLCD3Q8N3E9 789 aa16.69■□□□□ 0.26
PCM1-218ENST00000523055 MCPH1Q8NEM0 835 aa16.69■□□□□ 0.26
PCM1-218ENST00000523055 ZNF558Q96NG5 402 aa16.69■□□□□ 0.26
PCM1-218ENST00000523055 PLIN2Q99541 437 aa16.69■□□□□ 0.26
PCM1-218ENST00000523055 TRAIPQ9BWF2 469 aa16.69■□□□□ 0.26
PCM1-218ENST00000523055 CACNA1GO43497 2377 aa16.69■□□□□ 0.26
PCM1-218ENST00000523055 CFAP47Q6ZTR5 3102 aa16.69■□□□□ 0.26
PCM1-218ENST00000523055 ERLIN2O94905 339 aa16.68■□□□□ 0.26
PCM1-218ENST00000523055 LMNAP02545 664 aaKnown RBP16.68■□□□□ 0.26
PCM1-218ENST00000523055 CYP11B2P19099 503 aa16.68■□□□□ 0.26
PCM1-218ENST00000523055 PDCP20941 246 aa16.68■□□□□ 0.26
PCM1-218ENST00000523055 MUTP22033 750 aa16.68■□□□□ 0.26
PCM1-218ENST00000523055 PPM1AP35813 382 aa16.68■□□□□ 0.26
PCM1-218ENST00000523055 SMC1AQ14683 1233 aaKnown RBP16.68■□□□□ 0.26
PCM1-218ENST00000523055 SF3A1Q15459 793 aaKnown RBP16.68■□□□□ 0.26
PCM1-218ENST00000523055 KIAA2013Q8IYS2 634 aa16.68■□□□□ 0.26
PCM1-218ENST00000523055 LRRC43Q8N309 656 aa16.68■□□□□ 0.26
PCM1-218ENST00000523055 SNX21Q969T3 373 aa16.68■□□□□ 0.26
PCM1-218ENST00000523055 PNMA5Q96PV4 448 aa16.68■□□□□ 0.26
PCM1-218ENST00000523055 KIFC3Q9BVG8 833 aa16.68■□□□□ 0.26
PCM1-218ENST00000523055 EIF2AQ9BY44 585 aaKnown RBP16.68■□□□□ 0.26
PCM1-218ENST00000523055 DLL3Q9NYJ7 618 aa16.68■□□□□ 0.26
PCM1-218ENST00000523055 SPG21Q9NZD8 308 aa16.68■□□□□ 0.26
PCM1-218ENST00000523055 MTMR6Q9Y217 621 aa16.68■□□□□ 0.26
PCM1-218ENST00000523055 PCDHB2Q9Y5E7 798 aa16.68■□□□□ 0.26
PCM1-218ENST00000523055 TTLL13PA6NNM8 815 aa16.67■□□□□ 0.26
PCM1-218ENST00000523055 HOXA2O43364 376 aa16.67■□□□□ 0.26
PCM1-218ENST00000523055 EDN1P05305 212 aa16.67■□□□□ 0.26
PCM1-218ENST00000523055 EPCAMP16422 314 aa16.67■□□□□ 0.26
PCM1-218ENST00000523055 ARF4P18085 180 aaPredicted RBP16.67■□□□□ 0.26
PCM1-218ENST00000523055 AFF1P51825 1210 aaKnown RBP16.67■□□□□ 0.26
PCM1-218ENST00000523055 KRT17Q04695 432 aa16.67■□□□□ 0.26
PCM1-218ENST00000523055 LRRC15Q8TF66 581 aa16.67■□□□□ 0.26
PCM1-218ENST00000523055 SLC22A17Q8WUG5 538 aa16.67■□□□□ 0.26
PCM1-218ENST00000523055 CNTNAP3BQ96NU0 1288 aa16.67■□□□□ 0.26
PCM1-218ENST00000523055 RTP3Q9BQQ7 232 aa16.67■□□□□ 0.26
PCM1-218ENST00000523055 RUSC1Q9BVN2 902 aa16.67■□□□□ 0.26
PCM1-218ENST00000523055 CNTNAP3Q9BZ76 1288 aa16.67■□□□□ 0.26
PCM1-218ENST00000523055 DUSP12Q9UNI6 340 aa16.67■□□□□ 0.26
PCM1-218ENST00000523055 INPP5FQ9Y2H2 1132 aa16.67■□□□□ 0.26
PCM1-218ENST00000523055 USP20Q9Y2K6 914 aa16.67■□□□□ 0.26
PCM1-218ENST00000523055 CLIC4Q9Y696 253 aa16.67■□□□□ 0.26
PCM1-218ENST00000523055 CACNA1IQ9P0X4 2223 aa16.66■□□□□ 0.26
PCM1-218ENST00000523055 B4GALT3O60512 393 aa16.66■□□□□ 0.26
PCM1-218ENST00000523055 ZNF623O75123 536 aa16.66■□□□□ 0.26
PCM1-218ENST00000523055 POU5F1BQ06416 359 aa16.66■□□□□ 0.26
PCM1-218ENST00000523055 TDGQ13569 410 aa16.66■□□□□ 0.26
PCM1-218ENST00000523055 ATAT1Q5SQI0 421 aa16.66■□□□□ 0.26
PCM1-218ENST00000523055 ARL6IP4Q66PJ3 421 aaKnown RBP16.66■□□□□ 0.26
PCM1-218ENST00000523055 CDCA2Q69YH5 1023 aaPredicted RBP16.66■□□□□ 0.26
PCM1-218ENST00000523055 AGMOQ6ZNB7 445 aa16.66■□□□□ 0.26
PCM1-218ENST00000523055 TMEM173Q86WV6 379 aaPredicted RBP16.66■□□□□ 0.26
PCM1-218ENST00000523055 SMG8Q8ND04 991 aaKnown RBP16.66■□□□□ 0.26
PCM1-218ENST00000523055 NFKBIZQ9BYH8 718 aa16.66■□□□□ 0.26
PCM1-218ENST00000523055 SEMA4AQ9H3S1 761 aa16.66■□□□□ 0.26
PCM1-218ENST00000523055 HES2Q9Y543 173 aa16.66■□□□□ 0.26
PCM1-218ENST00000523055 R4GN57 208 aa16.66■□□□□ 0.26
PCM1-218ENST00000523055 FANCMQ8IYD8 2048 aa16.66■□□□□ 0.26
PCM1-218ENST00000523055 CITO14578 2027 aa16.65■□□□□ 0.26
PCM1-218ENST00000523055 RAB27AP51159 221 aa16.65■□□□□ 0.26
PCM1-218ENST00000523055 PUM1Q14671 1186 aaKnown RBP eCLIP16.65■□□□□ 0.26
PCM1-218ENST00000523055 DAW1Q8N136 415 aa16.65■□□□□ 0.26
PCM1-218ENST00000523055 SIX5Q8N196 739 aa16.65■□□□□ 0.26
PCM1-218ENST00000523055 AUTS2Q8WXX7 1259 aa16.65■□□□□ 0.26
PCM1-218ENST00000523055 ZBP1Q9H171 429 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms