RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 ACKR2O00590 384 aa16.79■□□□□ 0.28
CTNNA1-236ENST00000522792 CLDN3O15551 220 aa16.79■□□□□ 0.28
CTNNA1-236ENST00000522792 DLATP10515 647 aaKnown RBP16.79■□□□□ 0.28
CTNNA1-236ENST00000522792 CYP2C9P11712 490 aa16.79■□□□□ 0.28
CTNNA1-236ENST00000522792 GPC3P51654 580 aa16.79■□□□□ 0.28
CTNNA1-236ENST00000522792 KLHDC7AQ5VTJ3 777 aa16.79■□□□□ 0.28
CTNNA1-236ENST00000522792 TRIM65Q6PJ69 517 aa16.79■□□□□ 0.28
CTNNA1-236ENST00000522792 CXCL17Q6UXB2 119 aa16.79■□□□□ 0.28
CTNNA1-236ENST00000522792 CRELD2Q6UXH1 353 aaPredicted RBP16.79■□□□□ 0.28
CTNNA1-236ENST00000522792 PARD3BQ8TEW8 1205 aa16.79■□□□□ 0.28
CTNNA1-236ENST00000522792 ZNF296Q8WUU4 475 aaPredicted RBP16.79■□□□□ 0.28
CTNNA1-236ENST00000522792 FAM84AQ96KN4 292 aa16.79■□□□□ 0.28
CTNNA1-236ENST00000522792 INTS2Q9H0H0 1204 aaKnown RBP16.79■□□□□ 0.28
CTNNA1-236ENST00000522792 SPC25Q9HBM1 224 aa16.79■□□□□ 0.28
CTNNA1-236ENST00000522792 PLCB1Q9NQ66 1216 aa16.79■□□□□ 0.28
CTNNA1-236ENST00000522792 XPNPEP3Q9NQH7 507 aa16.79■□□□□ 0.28
CTNNA1-236ENST00000522792 HDAC6Q9UBN7 1215 aa16.79■□□□□ 0.28
CTNNA1-236ENST00000522792 GINS2Q9Y248 185 aa16.79■□□□□ 0.28
CTNNA1-236ENST00000522792 FHOD1Q9Y613 1164 aa16.79■□□□□ 0.28
CTNNA1-236ENST00000522792 KAT6AQ92794 2004 aa16.79■□□□□ 0.28
CTNNA1-236ENST00000522792 TOM1L1O75674 476 aa16.78■□□□□ 0.28
CTNNA1-236ENST00000522792 WNT7BP56706 349 aa16.78■□□□□ 0.28
CTNNA1-236ENST00000522792 MEA1Q16626 185 aa16.78■□□□□ 0.28
CTNNA1-236ENST00000522792 KIZQ2M2Z5 673 aa16.78■□□□□ 0.28
CTNNA1-236ENST00000522792 C7orf31Q8N865 590 aa16.78■□□□□ 0.28
CTNNA1-236ENST00000522792 PPP1R13BQ96KQ4 1090 aa16.78■□□□□ 0.28
CTNNA1-236ENST00000522792 NFKBIZQ9BYH8 718 aa16.78■□□□□ 0.28
CTNNA1-236ENST00000522792 EDEM3Q9BZQ6 932 aa16.78■□□□□ 0.28
CTNNA1-236ENST00000522792 TMEM117Q9H0C3 514 aa16.78■□□□□ 0.28
CTNNA1-236ENST00000522792 UPF3AQ9H1J1 476 aaKnown RBP16.78■□□□□ 0.28
CTNNA1-236ENST00000522792 KIAA1586Q9HCI6 787 aa16.78■□□□□ 0.28
CTNNA1-236ENST00000522792 TSKSQ9UJT2 592 aa16.78■□□□□ 0.28
CTNNA1-236ENST00000522792 AJAP1Q9UKB5 411 aaPredicted RBP16.78■□□□□ 0.28
CTNNA1-236ENST00000522792 KIAA0391O15091 583 aaKnown RBP16.77■□□□□ 0.28
CTNNA1-236ENST00000522792 TREHO43280 583 aa16.77■□□□□ 0.28
CTNNA1-236ENST00000522792 ZEB2O60315 1214 aa16.77■□□□□ 0.28
CTNNA1-236ENST00000522792 FKTNO75072 461 aa16.77■□□□□ 0.28
CTNNA1-236ENST00000522792 LRRN2O75325 713 aa16.77■□□□□ 0.28
CTNNA1-236ENST00000522792 HMGCRP04035 888 aa16.77■□□□□ 0.28
CTNNA1-236ENST00000522792 UCHL3P15374 230 aa16.77■□□□□ 0.28
CTNNA1-236ENST00000522792 MXI1P50539 228 aa16.77■□□□□ 0.28
CTNNA1-236ENST00000522792 MAP2K1Q02750 393 aaPredicted RBP16.77■□□□□ 0.28
CTNNA1-236ENST00000522792 POU5F1BQ06416 359 aa16.77■□□□□ 0.28
CTNNA1-236ENST00000522792 ATF7IP2Q5U623 682 aa16.77■□□□□ 0.28
CTNNA1-236ENST00000522792 EEF1DP3Q658K8 133 aa16.77■□□□□ 0.28
CTNNA1-236ENST00000522792 TMC2Q8TDI7 906 aa16.77■□□□□ 0.28
CTNNA1-236ENST00000522792 ERO1AQ96HE7 468 aa16.77■□□□□ 0.28
CTNNA1-236ENST00000522792 C16orf45Q96MC5 204 aaPredicted RBP16.77■□□□□ 0.28
CTNNA1-236ENST00000522792 MTG1Q9BT17 334 aaPredicted RBP16.77■□□□□ 0.28
CTNNA1-236ENST00000522792 PRMT7Q9NVM4 692 aaPredicted RBP16.77■□□□□ 0.28
CTNNA1-236ENST00000522792 RBAKQ9NYW8 714 aaPredicted RBP16.77■□□□□ 0.28
CTNNA1-236ENST00000522792 PPP2R2CQ9Y2T4 447 aa16.77■□□□□ 0.28
CTNNA1-236ENST00000522792 C17orf102A2RUQ5 167 aa16.77■□□□□ 0.27
CTNNA1-236ENST00000522792 MBLAC1A4D2B0 266 aaPredicted RBP16.77■□□□□ 0.27
CTNNA1-236ENST00000522792 ABLIM1O14639 778 aa16.77■□□□□ 0.27
CTNNA1-236ENST00000522792 N4BP1O75113 896 aaKnown RBP16.77■□□□□ 0.27
CTNNA1-236ENST00000522792 TNFSF9P41273 254 aa16.77■□□□□ 0.27
CTNNA1-236ENST00000522792 RAPGEF1Q13905 1077 aa16.77■□□□□ 0.27
CTNNA1-236ENST00000522792 LMBRD2Q68DH5 695 aaPredicted RBP16.77■□□□□ 0.27
CTNNA1-236ENST00000522792 TSHZ1Q6ZSZ6 1077 aa16.77■□□□□ 0.27
CTNNA1-236ENST00000522792 DNAJB3Q8WWF6 145 aa16.77■□□□□ 0.27
CTNNA1-236ENST00000522792 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.77■□□□□ 0.27
CTNNA1-236ENST00000522792 PLAGL2Q9UPG8 496 aa16.77■□□□□ 0.27
CTNNA1-236ENST00000522792 SMIM35A0A1B0GVV1 85 aa16.76■□□□□ 0.27
CTNNA1-236ENST00000522792 RBAK-RBAKDNI3L0D1 243 aa16.76■□□□□ 0.27
CTNNA1-236ENST00000522792 KPNA6O60684 536 aa16.76■□□□□ 0.27
CTNNA1-236ENST00000522792 ADAMTS4O75173 837 aa16.76■□□□□ 0.27
CTNNA1-236ENST00000522792 LDHAP00338 332 aaKnown RBP16.76■□□□□ 0.27
CTNNA1-236ENST00000522792 PLEKP08567 350 aaPredicted RBP16.76■□□□□ 0.27
CTNNA1-236ENST00000522792 FGFR4P22455 802 aa16.76■□□□□ 0.27
CTNNA1-236ENST00000522792 ADAM17P78536 824 aa16.76■□□□□ 0.27
CTNNA1-236ENST00000522792 PSMD6Q15008 389 aa16.76■□□□□ 0.27
CTNNA1-236ENST00000522792 AMHR2Q16671 573 aa16.76■□□□□ 0.27
CTNNA1-236ENST00000522792 ZNF568Q3ZCX4 644 aa16.76■□□□□ 0.27
CTNNA1-236ENST00000522792 IQCEQ6IPM2 695 aa16.76■□□□□ 0.27
CTNNA1-236ENST00000522792 IFNLR1Q8IU57 520 aaPredicted RBP16.76■□□□□ 0.27
CTNNA1-236ENST00000522792 ACRBPQ8NEB7 543 aa16.76■□□□□ 0.27
CTNNA1-236ENST00000522792 CPB2Q96IY4 423 aa16.76■□□□□ 0.27
CTNNA1-236ENST00000522792 PDE11AQ9HCR9 933 aa16.76■□□□□ 0.27
CTNNA1-236ENST00000522792 KCND1Q9NSA2 647 aa16.76■□□□□ 0.27
CTNNA1-236ENST00000522792 HNRNPH3P31942 346 aaKnown RBP16.75■□□□□ 0.27
CTNNA1-236ENST00000522792 MCL1Q07820 350 aa16.75■□□□□ 0.27
CTNNA1-236ENST00000522792 CETN1Q12798 172 aa16.75■□□□□ 0.27
CTNNA1-236ENST00000522792 EPC2Q52LR7 807 aa16.75■□□□□ 0.27
CTNNA1-236ENST00000522792 DNTTIP2Q5QJE6 756 aaKnown RBP16.75■□□□□ 0.27
CTNNA1-236ENST00000522792 SFMBT2Q5VUG0 894 aa16.75■□□□□ 0.27
CTNNA1-236ENST00000522792 MPZL3Q6UWV2 235 aa16.75■□□□□ 0.27
CTNNA1-236ENST00000522792 USP37Q86T82 979 aa16.75■□□□□ 0.27
CTNNA1-236ENST00000522792 EHBP1Q8NDI1 1231 aa16.75■□□□□ 0.27
CTNNA1-236ENST00000522792 LMO3Q8TAP4 145 aa16.75■□□□□ 0.27
CTNNA1-236ENST00000522792 SPAG5Q96R06 1193 aa16.75■□□□□ 0.27
CTNNA1-236ENST00000522792 FNBP1Q96RU3 617 aa16.75■□□□□ 0.27
CTNNA1-236ENST00000522792 NHEJ1Q9H9Q4 299 aaPredicted RBP16.75■□□□□ 0.27
CTNNA1-236ENST00000522792 CDHR5Q9HBB8 845 aa16.75■□□□□ 0.27
CTNNA1-236ENST00000522792 TMEM8AQ9HCN3 771 aa16.75■□□□□ 0.27
CTNNA1-236ENST00000522792 PTPRHQ9HD43 1115 aa16.75■□□□□ 0.27
CTNNA1-236ENST00000522792 FAM189A1O60320 539 aa16.75■□□□□ 0.27
CTNNA1-236ENST00000522792 PROZP22891 400 aa16.75■□□□□ 0.27
CTNNA1-236ENST00000522792 MCCD1P59942 119 aaPredicted RBP16.75■□□□□ 0.27
CTNNA1-236ENST00000522792 OSTNP61366 133 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms