RNA–Protein interactions for RNA: ENST00000522139.1

CNOT8-220, Transcript of CCR4-NOT transcription complex subunit 8, humanhuman

TSL 3

Gene CNOT8, Length 566 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT8-220ENST00000522139 PLIN1O60240 522 aa6.47□□□□□ -1.37
CNOT8-220ENST00000522139 TSPAN15O95858 294 aa6.47□□□□□ -1.37
CNOT8-220ENST00000522139 HRGP04196 525 aa6.47□□□□□ -1.37
CNOT8-220ENST00000522139 ALDH2P05091 517 aa6.47□□□□□ -1.37
CNOT8-220ENST00000522139 CSF2RBP32927 897 aa6.47□□□□□ -1.37
CNOT8-220ENST00000522139 USP14P54578 494 aa6.47□□□□□ -1.37
CNOT8-220ENST00000522139 DSC2Q02487 901 aa6.47□□□□□ -1.37
CNOT8-220ENST00000522139 LLGL1Q15334 1064 aa6.47□□□□□ -1.37
CNOT8-220ENST00000522139 ZNF827Q17R98 1081 aa6.47□□□□□ -1.37
CNOT8-220ENST00000522139 C19orf54Q5BKX5 351 aa6.47□□□□□ -1.37
CNOT8-220ENST00000522139 GJC2Q5T442 439 aaPredicted RBP6.47□□□□□ -1.37
CNOT8-220ENST00000522139 Q6ZVL8 140 aa6.47□□□□□ -1.37
CNOT8-220ENST00000522139 DENND1CQ8IV53 801 aa6.47□□□□□ -1.37
CNOT8-220ENST00000522139 REXO1L1PQ8IX06 675 aa6.47□□□□□ -1.37
CNOT8-220ENST00000522139 RHOT1Q8IXI2 618 aa6.47□□□□□ -1.37
CNOT8-220ENST00000522139 CARFQ8N187 725 aa6.47□□□□□ -1.37
CNOT8-220ENST00000522139 PLA2G15Q8NCC3 412 aa6.47□□□□□ -1.37
CNOT8-220ENST00000522139 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.47□□□□□ -1.37
CNOT8-220ENST00000522139 RAB24Q969Q5 203 aa6.47□□□□□ -1.37
CNOT8-220ENST00000522139 DACT3Q96B18 629 aaPredicted RBP6.47□□□□□ -1.37
CNOT8-220ENST00000522139 CD320Q9NPF0 282 aa6.47□□□□□ -1.37
CNOT8-220ENST00000522139 MAN1C1Q9NR34 630 aa6.47□□□□□ -1.37
CNOT8-220ENST00000522139 TLR9Q9NR96 1032 aa6.47□□□□□ -1.37
CNOT8-220ENST00000522139 CHST12Q9NRB3 414 aa6.47□□□□□ -1.37
CNOT8-220ENST00000522139 ING3Q9NXR8 418 aa6.47□□□□□ -1.37
CNOT8-220ENST00000522139 ZDHHC9Q9Y397 364 aa6.47□□□□□ -1.37
CNOT8-220ENST00000522139 CTDP1Q9Y5B0 961 aaPredicted RBP6.47□□□□□ -1.37
CNOT8-220ENST00000522139 PCDHB1Q9Y5F3 818 aa6.47□□□□□ -1.37
CNOT8-220ENST00000522139 RBM8AQ9Y5S9 174 aaKnown RBP6.47□□□□□ -1.37
CNOT8-220ENST00000522139 CFAP20Q9Y6A4 193 aaKnown RBP6.47□□□□□ -1.37
CNOT8-220ENST00000522139 FGD6Q6ZV73 1430 aa6.47□□□□□ -1.37
CNOT8-220ENST00000522139 PHF2O75151 1096 aa6.46□□□□□ -1.38
CNOT8-220ENST00000522139 TUSC2O75896 110 aa6.46□□□□□ -1.38
CNOT8-220ENST00000522139 ALDH1A2O94788 518 aa6.46□□□□□ -1.38
CNOT8-220ENST00000522139 UBXN7O94888 489 aa6.46□□□□□ -1.38
CNOT8-220ENST00000522139 RHBDL3P58872 404 aa6.46□□□□□ -1.38
CNOT8-220ENST00000522139 USP10Q14694 798 aaKnown RBP6.46□□□□□ -1.38
CNOT8-220ENST00000522139 ACAP1Q15027 740 aa6.46□□□□□ -1.38
CNOT8-220ENST00000522139 ZNF124Q15973 351 aa6.46□□□□□ -1.38
CNOT8-220ENST00000522139 VMACQ2NL98 169 aa6.46□□□□□ -1.38
CNOT8-220ENST00000522139 ZNF385BQ569K4 471 aa6.46□□□□□ -1.38
CNOT8-220ENST00000522139 SYCP2LQ5T4T6 812 aa6.46□□□□□ -1.38
CNOT8-220ENST00000522139 ADAMTS17Q8TE56 1095 aa6.46□□□□□ -1.38
CNOT8-220ENST00000522139 GCDHQ92947 438 aaPredicted RBP6.46□□□□□ -1.38
CNOT8-220ENST00000522139 MIA2Q96PC5 1412 aa6.46□□□□□ -1.38
CNOT8-220ENST00000522139 CGRRF1Q99675 332 aa6.46□□□□□ -1.38
CNOT8-220ENST00000522139 BARX1Q9HBU1 254 aaPredicted RBP6.46□□□□□ -1.38
CNOT8-220ENST00000522139 ADAM29Q9UKF5 820 aa6.46□□□□□ -1.38
CNOT8-220ENST00000522139 FAM50BQ9Y247 325 aa6.46□□□□□ -1.38
CNOT8-220ENST00000522139 SIK3Q9Y2K2 1263 aa6.46□□□□□ -1.38
CNOT8-220ENST00000522139 ABCA5Q8WWZ7 1642 aa6.46□□□□□ -1.38
CNOT8-220ENST00000522139 GRIN2BQ13224 1484 aa6.46□□□□□ -1.38
CNOT8-220ENST00000522139 GCC2Q8IWJ2 1684 aa6.45□□□□□ -1.38
CNOT8-220ENST00000522139 EHBP1L1Q8N3D4 1523 aa6.45□□□□□ -1.38
CNOT8-220ENST00000522139 DBX1A6NMT0 343 aa6.45□□□□□ -1.38
CNOT8-220ENST00000522139 B3GALT2O43825 422 aa6.45□□□□□ -1.38
CNOT8-220ENST00000522139 ECHS1P30084 290 aa6.45□□□□□ -1.38
CNOT8-220ENST00000522139 RAP1GAPP47736 663 aa6.45□□□□□ -1.38
CNOT8-220ENST00000522139 SLC6A9P48067 706 aa6.45□□□□□ -1.38
CNOT8-220ENST00000522139 AFF3P51826 1226 aaKnown RBP6.45□□□□□ -1.38
CNOT8-220ENST00000522139 PER3P56645 1201 aa6.45□□□□□ -1.38
CNOT8-220ENST00000522139 LINC00310P59036 64 aa6.45□□□□□ -1.38
CNOT8-220ENST00000522139 MST1LQ2TV78 715 aa6.45□□□□□ -1.38
CNOT8-220ENST00000522139 COBLL1Q53SF7 1204 aa6.45□□□□□ -1.38
CNOT8-220ENST00000522139 AGBL4Q5VU57 503 aa6.45□□□□□ -1.38
CNOT8-220ENST00000522139 PPP4R3AQ6IN85 833 aa6.45□□□□□ -1.38
CNOT8-220ENST00000522139 ZDHHC14Q8IZN3 488 aa6.45□□□□□ -1.38
CNOT8-220ENST00000522139 KLHL36Q8N4N3 616 aa6.45□□□□□ -1.38
CNOT8-220ENST00000522139 PJA1Q8NG27 643 aa6.45□□□□□ -1.38
CNOT8-220ENST00000522139 SVIPQ8NHG7 77 aa6.45□□□□□ -1.38
CNOT8-220ENST00000522139 ZNF480Q8WV37 535 aa6.45□□□□□ -1.38
CNOT8-220ENST00000522139 TTC17Q96AE7 1141 aa6.45□□□□□ -1.38
CNOT8-220ENST00000522139 OR10A2Q9H208 303 aa6.45□□□□□ -1.38
CNOT8-220ENST00000522139 TMEM60Q9H2L4 133 aa6.45□□□□□ -1.38
CNOT8-220ENST00000522139 FAM204AQ9H8W3 233 aa6.45□□□□□ -1.38
CNOT8-220ENST00000522139 FANCD2Q9BXW9 1451 aa6.45□□□□□ -1.38
CNOT8-220ENST00000522139 TOPBP1Q92547 1522 aa6.45□□□□□ -1.38
CNOT8-220ENST00000522139 KDM5BQ9UGL1 1544 aa6.45□□□□□ -1.38
CNOT8-220ENST00000522139 SUPT6HQ7KZ85 1726 aaKnown RBP6.45□□□□□ -1.38
CNOT8-220ENST00000522139 HECW1Q76N89 1606 aa6.44□□□□□ -1.38
CNOT8-220ENST00000522139 PTPN23Q9H3S7 1636 aa6.44□□□□□ -1.38
CNOT8-220ENST00000522139 LRRC14BA6NHZ5 514 aa6.44□□□□□ -1.38
CNOT8-220ENST00000522139 APAF1O14727 1248 aa6.44□□□□□ -1.38
CNOT8-220ENST00000522139 ADCY6O43306 1168 aa6.44□□□□□ -1.38
CNOT8-220ENST00000522139 ENDOD1O94919 500 aa6.44□□□□□ -1.38
CNOT8-220ENST00000522139 FTLP02792 175 aaPredicted RBP6.44□□□□□ -1.38
CNOT8-220ENST00000522139 PHKG2P15735 406 aa6.44□□□□□ -1.38
CNOT8-220ENST00000522139 HTR1BP28222 390 aa6.44□□□□□ -1.38
CNOT8-220ENST00000522139 KIR2DL3P43628 341 aa6.44□□□□□ -1.38
CNOT8-220ENST00000522139 MAP2K6P52564 334 aa6.44□□□□□ -1.38
CNOT8-220ENST00000522139 ATP2C1P98194 919 aaPredicted RBP6.44□□□□□ -1.38
CNOT8-220ENST00000522139 TBR1Q16650 682 aa6.44□□□□□ -1.38
CNOT8-220ENST00000522139 FAM26FQ5R3K3 315 aa6.44□□□□□ -1.38
CNOT8-220ENST00000522139 SRGAP1Q7Z6B7 1085 aa6.44□□□□□ -1.38
CNOT8-220ENST00000522139 TTC7BQ86TV6 843 aa6.44□□□□□ -1.38
CNOT8-220ENST00000522139 DRC7Q8IY82 874 aa6.44□□□□□ -1.38
CNOT8-220ENST00000522139 PQLC1Q8N2U9 271 aa6.44□□□□□ -1.38
CNOT8-220ENST00000522139 TP53I13Q8NBR0 393 aaPredicted RBP6.44□□□□□ -1.38
CNOT8-220ENST00000522139 CCHCR1Q8TD31 782 aa6.44□□□□□ -1.38
CNOT8-220ENST00000522139 NSUN6Q8TEA1 469 aaKnown RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms