RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 PPP6R3Q5H9R7 873 aaPredicted RBP14.7□□□□□ -0.06
SYNPO-205ENST00000522122 DPY19L2Q6NUT2 758 aa14.7□□□□□ -0.06
SYNPO-205ENST00000522122 PPWD1Q96BP3 646 aaKnown RBP14.7□□□□□ -0.06
SYNPO-205ENST00000522122 TULP2O00295 520 aa14.7□□□□□ -0.06
SYNPO-205ENST00000522122 GYG2O15488 501 aa14.7□□□□□ -0.06
SYNPO-205ENST00000522122 TTC4O95801 387 aa14.7□□□□□ -0.06
SYNPO-205ENST00000522122 KLRC1P26715 233 aa14.7□□□□□ -0.06
SYNPO-205ENST00000522122 MARK3P27448 753 aa14.7□□□□□ -0.06
SYNPO-205ENST00000522122 AP1ARQ63HQ0 302 aa14.7□□□□□ -0.06
SYNPO-205ENST00000522122 FOXR1Q6PIV2 292 aa14.7□□□□□ -0.06
SYNPO-205ENST00000522122 ARL8AQ96BM9 186 aa14.7□□□□□ -0.06
SYNPO-205ENST00000522122 LRRC37BQ96QE4 947 aa14.7□□□□□ -0.06
SYNPO-205ENST00000522122 PPARGC1AQ9UBK2 798 aaKnown RBP14.7□□□□□ -0.06
SYNPO-205ENST00000522122 CFAP73A6NFT4 308 aa14.7□□□□□ -0.06
SYNPO-205ENST00000522122 KRT3P12035 628 aa14.7□□□□□ -0.06
SYNPO-205ENST00000522122 NCF2P19878 526 aaPredicted RBP14.7□□□□□ -0.06
SYNPO-205ENST00000522122 KPNA2P52292 529 aaKnown RBP14.7□□□□□ -0.06
SYNPO-205ENST00000522122 KLHL38Q2WGJ6 581 aa14.7□□□□□ -0.06
SYNPO-205ENST00000522122 RC3H1Q5TC82 1133 aaKnown RBP14.7□□□□□ -0.06
SYNPO-205ENST00000522122 CENPPQ6IPU0 288 aa14.7□□□□□ -0.06
SYNPO-205ENST00000522122 PRPF38AQ8NAV1 312 aaKnown RBP14.7□□□□□ -0.06
SYNPO-205ENST00000522122 NSUN6Q8TEA1 469 aaKnown RBP14.7□□□□□ -0.06
SYNPO-205ENST00000522122 STK33Q9BYT3 514 aa14.7□□□□□ -0.06
SYNPO-205ENST00000522122 TUFT1Q9NNX1 390 aa14.7□□□□□ -0.06
SYNPO-205ENST00000522122 MAGED2Q9UNF1 606 aaPredicted RBP14.7□□□□□ -0.06
SYNPO-205ENST00000522122 NFIXQ14938 502 aa14.7□□□□□ -0.06
SYNPO-205ENST00000522122 C1orf54Q8WWF1 131 aa14.7□□□□□ -0.06
SYNPO-205ENST00000522122 DUSP9Q99956 384 aaKnown RBP14.7□□□□□ -0.06
SYNPO-205ENST00000522122 NCAPGQ9BPX3 1015 aa14.7□□□□□ -0.06
SYNPO-205ENST00000522122 LRRC14Q15048 493 aa14.69□□□□□ -0.06
SYNPO-205ENST00000522122 KIAA1755Q5JYT7 1200 aa14.69□□□□□ -0.06
SYNPO-205ENST00000522122 TTLL6Q8N841 843 aa14.69□□□□□ -0.06
SYNPO-205ENST00000522122 ANKS1AQ92625 1134 aa14.69□□□□□ -0.06
SYNPO-205ENST00000522122 SNF8Q96H20 258 aa14.69□□□□□ -0.06
SYNPO-205ENST00000522122 STXBP2Q15833 593 aa14.69□□□□□ -0.06
SYNPO-205ENST00000522122 SPOPLQ6IQ16 392 aa14.69□□□□□ -0.06
SYNPO-205ENST00000522122 SIX6OS1Q8N1H7 587 aa14.69□□□□□ -0.06
SYNPO-205ENST00000522122 EFHD1Q9BUP0 239 aa14.69□□□□□ -0.06
SYNPO-205ENST00000522122 INTUQ9ULD6 942 aa14.69□□□□□ -0.06
SYNPO-205ENST00000522122 MYO3BQ8WXR4 1341 aa14.69□□□□□ -0.06
SYNPO-205ENST00000522122 GOLGA8MH3BSY2 632 aa14.69□□□□□ -0.06
SYNPO-205ENST00000522122 MYBL1P10243 752 aa14.69□□□□□ -0.06
SYNPO-205ENST00000522122 GNA15P30679 374 aa14.69□□□□□ -0.06
SYNPO-205ENST00000522122 ZNF699Q32M78 642 aa14.69□□□□□ -0.06
SYNPO-205ENST00000522122 TRIM72Q6ZMU5 477 aa14.69□□□□□ -0.06
SYNPO-205ENST00000522122 ARMCX2Q7L311 632 aa14.69□□□□□ -0.06
SYNPO-205ENST00000522122 TGS1Q96RS0 853 aaKnown RBP14.69□□□□□ -0.06
SYNPO-205ENST00000522122 TMBIM4Q9HC24 238 aa14.69□□□□□ -0.06
SYNPO-205ENST00000522122 SUCLA2Q9P2R7 463 aaPredicted RBP14.69□□□□□ -0.06
SYNPO-205ENST00000522122 GABBR1Q9UBS5 961 aa14.69□□□□□ -0.06
SYNPO-205ENST00000522122 FLT1P17948 1338 aa14.69□□□□□ -0.06
SYNPO-205ENST00000522122 TTI1O43156 1089 aa14.69□□□□□ -0.06
SYNPO-205ENST00000522122 C21orf2O43822 256 aa14.69□□□□□ -0.06
SYNPO-205ENST00000522122 ECE2O60344 883 aa14.69□□□□□ -0.06
SYNPO-205ENST00000522122 RTN2O75298 545 aa14.69□□□□□ -0.06
SYNPO-205ENST00000522122 LMNAP02545 664 aaKnown RBP14.69□□□□□ -0.06
SYNPO-205ENST00000522122 HSD17B3P37058 310 aa14.69□□□□□ -0.06
SYNPO-205ENST00000522122 GPS1Q13098 491 aa14.69□□□□□ -0.06
SYNPO-205ENST00000522122 SEC16BQ96JE7 1060 aa14.69□□□□□ -0.06
SYNPO-205ENST00000522122 ASNSD1Q9NWL6 643 aa14.69□□□□□ -0.06
SYNPO-205ENST00000522122 IP6K2Q9UHH9 426 aa14.69□□□□□ -0.06
SYNPO-205ENST00000522122 COL5A2P05997 1499 aaPredicted RBP14.68□□□□□ -0.06
SYNPO-205ENST00000522122 H0Y3Z8 333 aa14.68□□□□□ -0.06
SYNPO-205ENST00000522122 PJA2O43164 708 aa14.68□□□□□ -0.06
SYNPO-205ENST00000522122 AGTP01019 485 aa14.68□□□□□ -0.06
SYNPO-205ENST00000522122 THOC5Q13769 683 aaKnown RBP14.68□□□□□ -0.06
SYNPO-205ENST00000522122 RAB44Q7Z6P3 723 aaPredicted RBP14.68□□□□□ -0.06
SYNPO-205ENST00000522122 BBS5Q8N3I7 341 aa14.68□□□□□ -0.06
SYNPO-205ENST00000522122 SDCCAG3Q96C92 435 aa14.68□□□□□ -0.06
SYNPO-205ENST00000522122 FAM167AQ96KS9 214 aa14.68□□□□□ -0.06
SYNPO-205ENST00000522122 FAM193BQ96PV7 902 aaPredicted RBP14.68□□□□□ -0.06
SYNPO-205ENST00000522122 RNF146Q9NTX7 359 aa14.68□□□□□ -0.06
SYNPO-205ENST00000522122 G3BP2Q9UN86 482 aaKnown RBP14.68□□□□□ -0.06
SYNPO-205ENST00000522122 DAGLAQ9Y4D2 1042 aa14.68□□□□□ -0.06
SYNPO-205ENST00000522122 ANKRD20A4Q4UJ75 823 aa14.68□□□□□ -0.06
SYNPO-205ENST00000522122 ANKRD20A8PQ5CZ79 823 aa14.68□□□□□ -0.06
SYNPO-205ENST00000522122 ANKRD20A2Q5SQ80 823 aa14.68□□□□□ -0.06
SYNPO-205ENST00000522122 ANKRD20A1Q5TYW2 823 aa14.68□□□□□ -0.06
SYNPO-205ENST00000522122 APEX2Q9UBZ4 518 aa14.68□□□□□ -0.06
SYNPO-205ENST00000522122 DMGDHQ9UI17 866 aaKnown RBP14.68□□□□□ -0.06
SYNPO-205ENST00000522122 UBE4BO95155 1302 aa14.68□□□□□ -0.06
SYNPO-205ENST00000522122 TBX3O15119 743 aa14.68□□□□□ -0.06
SYNPO-205ENST00000522122 OSBPP22059 807 aa14.68□□□□□ -0.06
SYNPO-205ENST00000522122 ACTN3Q08043 901 aaPredicted RBP14.68□□□□□ -0.06
SYNPO-205ENST00000522122 MEI1Q5TIA1 1274 aa14.68□□□□□ -0.06
SYNPO-205ENST00000522122 SLC35G2Q8TBE7 412 aa14.68□□□□□ -0.06
SYNPO-205ENST00000522122 DDX27Q96GQ7 796 aaKnown RBP14.68□□□□□ -0.06
SYNPO-205ENST00000522122 REEP2Q9BRK0 252 aa14.68□□□□□ -0.06
SYNPO-205ENST00000522122 ETNK1Q9HBU6 452 aa14.68□□□□□ -0.06
SYNPO-205ENST00000522122 THEGQ9P2T0 379 aa14.68□□□□□ -0.06
SYNPO-205ENST00000522122 CASZ1Q86V15 1759 aa14.68□□□□□ -0.06
SYNPO-205ENST00000522122 CYP26A1O43174 497 aa14.68□□□□□ -0.06
SYNPO-205ENST00000522122 KRT7P08729 469 aa14.68□□□□□ -0.06
SYNPO-205ENST00000522122 SKOR1P84550 965 aa14.68□□□□□ -0.06
SYNPO-205ENST00000522122 SWSAP1Q6NVH7 229 aa14.68□□□□□ -0.06
SYNPO-205ENST00000522122 CREG2Q8IUH2 290 aa14.68□□□□□ -0.06
SYNPO-205ENST00000522122 SP8Q8IXZ3 490 aa14.68□□□□□ -0.06
SYNPO-205ENST00000522122 PPP1R16BQ96T49 567 aa14.68□□□□□ -0.06
SYNPO-205ENST00000522122 SERPINI1Q99574 410 aa14.68□□□□□ -0.06
SYNPO-205ENST00000522122 GDF3Q9NR23 364 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms