RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 LGI4Q8N135 537 aa7.43□□□□□ -1.22
PABPC1-216ENST00000520868 TXNDC5Q8NBS9 432 aaKnown RBP7.43□□□□□ -1.22
PABPC1-216ENST00000520868 SREK1Q8WXA9 508 aaKnown RBP7.43□□□□□ -1.22
PABPC1-216ENST00000520868 ZSWIM3Q96MP5 696 aa7.43□□□□□ -1.22
PABPC1-216ENST00000520868 DLL4Q9NR61 685 aa7.43□□□□□ -1.22
PABPC1-216ENST00000520868 SAGE1Q9NXZ1 904 aa7.43□□□□□ -1.22
PABPC1-216ENST00000520868 CROTQ9UKG9 612 aa7.43□□□□□ -1.22
PABPC1-216ENST00000520868 WASF3Q9UPY6 502 aa7.43□□□□□ -1.22
PABPC1-216ENST00000520868 COL4A1P02462 1669 aa7.43□□□□□ -1.22
PABPC1-216ENST00000520868 LAMB2P55268 1798 aa7.43□□□□□ -1.22
PABPC1-216ENST00000520868 ANKRD36CQ5JPF3 1778 aa7.43□□□□□ -1.22
PABPC1-216ENST00000520868 CCDC163A0A0D9SF12 145 aa7.42□□□□□ -1.22
PABPC1-216ENST00000520868 UBE2Q2LH0YL09 131 aa7.42□□□□□ -1.22
PABPC1-216ENST00000520868 PDE8AO60658 829 aa7.42□□□□□ -1.22
PABPC1-216ENST00000520868 CYP1A1P04798 512 aaPredicted RBP7.42□□□□□ -1.22
PABPC1-216ENST00000520868 PCCAP05165 728 aaPredicted RBP7.42□□□□□ -1.22
PABPC1-216ENST00000520868 HSP90B1P14625 803 aaKnown RBP7.42□□□□□ -1.22
PABPC1-216ENST00000520868 ZNF280AP59817 542 aaPredicted RBP7.42□□□□□ -1.22
PABPC1-216ENST00000520868 PLP2Q04941 152 aa7.42□□□□□ -1.22
PABPC1-216ENST00000520868 RASAL3Q86YV0 1011 aa7.42□□□□□ -1.22
PABPC1-216ENST00000520868 ANKRD18AQ8IVF6 992 aa7.42□□□□□ -1.22
PABPC1-216ENST00000520868 NLGN4XQ8N0W4 816 aa7.42□□□□□ -1.22
PABPC1-216ENST00000520868 CCDC191Q8NCU4 936 aa7.42□□□□□ -1.22
PABPC1-216ENST00000520868 AGBL3Q8NEM8 1001 aa7.42□□□□□ -1.22
PABPC1-216ENST00000520868 FBXW5Q969U6 566 aa7.42□□□□□ -1.22
PABPC1-216ENST00000520868 MYOZ2Q9NPC6 264 aa7.42□□□□□ -1.22
PABPC1-216ENST00000520868 CWC25Q9NXE8 425 aaPredicted RBP7.42□□□□□ -1.22
PABPC1-216ENST00000520868 MYBBP1AQ9BQG0 1328 aaKnown RBP7.42□□□□□ -1.22
PABPC1-216ENST00000520868 POLR2AP24928 1970 aaKnown RBP7.42□□□□□ -1.22
PABPC1-216ENST00000520868 ARVCFO00192 962 aa7.41□□□□□ -1.22
PABPC1-216ENST00000520868 APAF1O14727 1248 aa7.41□□□□□ -1.22
PABPC1-216ENST00000520868 EFCAB14O75071 495 aa7.41□□□□□ -1.22
PABPC1-216ENST00000520868 ZNF853P0CG23 659 aa7.41□□□□□ -1.22
PABPC1-216ENST00000520868 GNAI1P63096 354 aa7.41□□□□□ -1.22
PABPC1-216ENST00000520868 NFKB2Q00653 900 aa7.41□□□□□ -1.22
PABPC1-216ENST00000520868 GPR19Q15760 415 aa7.41□□□□□ -1.22
PABPC1-216ENST00000520868 FAM47CQ5HY64 1035 aa7.41□□□□□ -1.22
PABPC1-216ENST00000520868 CTU1Q7Z7A3 348 aaKnown RBP7.41□□□□□ -1.22
PABPC1-216ENST00000520868 RBM12BQ8IXT5 1001 aaKnown RBP7.41□□□□□ -1.22
PABPC1-216ENST00000520868 DTX3Q8N9I9 347 aa7.41□□□□□ -1.22
PABPC1-216ENST00000520868 C8orf58Q8NAV2 365 aa7.41□□□□□ -1.22
PABPC1-216ENST00000520868 ZSWIM2Q8NEG5 633 aa7.41□□□□□ -1.22
PABPC1-216ENST00000520868 DNAJC7Q99615 494 aa7.41□□□□□ -1.22
PABPC1-216ENST00000520868 MXD3Q9BW11 206 aa7.41□□□□□ -1.22
PABPC1-216ENST00000520868 TMEM168Q9H0V1 697 aa7.41□□□□□ -1.22
PABPC1-216ENST00000520868 RBPJLQ9UBG7 517 aa7.41□□□□□ -1.22
PABPC1-216ENST00000520868 FTSJ1Q9UET6 329 aa7.41□□□□□ -1.22
PABPC1-216ENST00000520868 PCDHA8Q9Y5H6 950 aa7.41□□□□□ -1.22
PABPC1-216ENST00000520868 XDHP47989 1333 aa7.41□□□□□ -1.22
PABPC1-216ENST00000520868 DDX58O95786 925 aaKnown RBP7.4□□□□□ -1.22
PABPC1-216ENST00000520868 LTFP02788 710 aa7.4□□□□□ -1.22
PABPC1-216ENST00000520868 CHGBP05060 677 aa7.4□□□□□ -1.22
PABPC1-216ENST00000520868 ENO2P09104 434 aaPredicted RBP7.4□□□□□ -1.22
PABPC1-216ENST00000520868 FKBP1BP68106 108 aa7.4□□□□□ -1.22
PABPC1-216ENST00000520868 PRKG1Q13976 671 aa7.4□□□□□ -1.22
PABPC1-216ENST00000520868 EP400NLQ6ZTU2 488 aa7.4□□□□□ -1.22
PABPC1-216ENST00000520868 C16orf59Q7L2K0 433 aa7.4□□□□□ -1.22
PABPC1-216ENST00000520868 PRRT2Q7Z6L0 340 aaPredicted RBP7.4□□□□□ -1.22
PABPC1-216ENST00000520868 PROSER1Q86XN7 944 aa7.4□□□□□ -1.22
PABPC1-216ENST00000520868 PCDH19Q8TAB3 1148 aa7.4□□□□□ -1.22
PABPC1-216ENST00000520868 THAP3Q8WTV1 239 aaPredicted RBP7.4□□□□□ -1.22
PABPC1-216ENST00000520868 KISS1RQ969F8 398 aaPredicted RBP7.4□□□□□ -1.22
PABPC1-216ENST00000520868 YTHDC1Q96MU7 727 aaKnown RBP7.4□□□□□ -1.22
PABPC1-216ENST00000520868 CATSPERZQ9NTU4 200 aa7.4□□□□□ -1.22
PABPC1-216ENST00000520868 IFT57Q9NWB7 429 aa7.4□□□□□ -1.22
PABPC1-216ENST00000520868 HDAC9Q9UKV0 1011 aa7.4□□□□□ -1.22
PABPC1-216ENST00000520868 SRPK3Q9UPE1 567 aa7.4□□□□□ -1.22
PABPC1-216ENST00000520868 MAP3K2Q9Y2U5 619 aa7.4□□□□□ -1.22
PABPC1-216ENST00000520868 DDX60Q8IY21 1712 aaKnown RBP7.4□□□□□ -1.23
PABPC1-216ENST00000520868 LRRC37AA6NMS7 1700 aa7.39□□□□□ -1.23
PABPC1-216ENST00000520868 PI4KAP2A4QPH2 592 aa7.39□□□□□ -1.23
PABPC1-216ENST00000520868 CCT4P50991 539 aaKnown RBP7.39□□□□□ -1.23
PABPC1-216ENST00000520868 MLLT6P55198 1093 aaPredicted RBP7.39□□□□□ -1.23
PABPC1-216ENST00000520868 SURF1Q15526 300 aa7.39□□□□□ -1.23
PABPC1-216ENST00000520868 DACT2Q5SW24 774 aa7.39□□□□□ -1.23
PABPC1-216ENST00000520868 CCDC30Q5VVM6 783 aa7.39□□□□□ -1.23
PABPC1-216ENST00000520868 TRMT10BQ6PF06 316 aaKnown RBP7.39□□□□□ -1.23
PABPC1-216ENST00000520868 PLEKHH3Q7Z736 793 aa7.39□□□□□ -1.23
PABPC1-216ENST00000520868 PI4KAP1Q8N8J0 262 aa7.39□□□□□ -1.23
PABPC1-216ENST00000520868 CDC5LQ99459 802 aaKnown RBP7.39□□□□□ -1.23
PABPC1-216ENST00000520868 OSBPL2Q9H1P3 480 aa7.39□□□□□ -1.23
PABPC1-216ENST00000520868 GREM2Q9H772 168 aa7.39□□□□□ -1.23
PABPC1-216ENST00000520868 TELO2Q9Y4R8 837 aa7.39□□□□□ -1.23
PABPC1-216ENST00000520868 SCN9AQ15858 1988 aa7.39□□□□□ -1.23
PABPC1-216ENST00000520868 PDE4DIPQ5VU43 2346 aa7.38□□□□□ -1.23
PABPC1-216ENST00000520868 WNT10BO00744 389 aa7.38□□□□□ -1.23
PABPC1-216ENST00000520868 FBXO21O94952 628 aa7.38□□□□□ -1.23
PABPC1-216ENST00000520868 CRTAMO95727 393 aa7.38□□□□□ -1.23
PABPC1-216ENST00000520868 IGKV5-2P06315 115 aa7.38□□□□□ -1.23
PABPC1-216ENST00000520868 CKMP06732 381 aa7.38□□□□□ -1.23
PABPC1-216ENST00000520868 GJA4P35212 333 aa7.38□□□□□ -1.23
PABPC1-216ENST00000520868 NF2P35240 595 aa7.38□□□□□ -1.23
PABPC1-216ENST00000520868 TM4SF4P48230 202 aa7.38□□□□□ -1.23
PABPC1-216ENST00000520868 CALD1Q05682 793 aaKnown RBP7.38□□□□□ -1.23
PABPC1-216ENST00000520868 CRY1Q16526 586 aa7.38□□□□□ -1.23
PABPC1-216ENST00000520868 FIGNQ5HY92 759 aa7.38□□□□□ -1.23
PABPC1-216ENST00000520868 CD276Q5ZPR3 534 aa7.38□□□□□ -1.23
PABPC1-216ENST00000520868 KSR2Q6VAB6 950 aa7.38□□□□□ -1.23
PABPC1-216ENST00000520868 ARHGAP36Q6ZRI8 547 aa7.38□□□□□ -1.23
PABPC1-216ENST00000520868 ZC3H7AQ8IWR0 971 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms