RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 MAB21L3Q8N8X9 362 aa13.71□□□□□ -0.21
TRAPPC9-208ENST00000520857 SEC14L1Q92503 715 aa13.71□□□□□ -0.21
TRAPPC9-208ENST00000520857 DYDC2Q96IM9 177 aa13.71□□□□□ -0.21
TRAPPC9-208ENST00000520857 MAPK4P31152 587 aa13.71□□□□□ -0.21
TRAPPC9-208ENST00000520857 JAM2P57087 298 aa13.71□□□□□ -0.21
TRAPPC9-208ENST00000520857 RRP1BQ14684 758 aaKnown RBP13.71□□□□□ -0.21
TRAPPC9-208ENST00000520857 KAZNQ674X7 775 aa13.71□□□□□ -0.21
TRAPPC9-208ENST00000520857 PPP1R18Q6NYC8 613 aa13.71□□□□□ -0.21
TRAPPC9-208ENST00000520857 MCUR1Q96AQ8 359 aa13.71□□□□□ -0.21
TRAPPC9-208ENST00000520857 L3MBTL3Q96JM7 780 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC9-208ENST00000520857 SERPINB12Q96P63 405 aa13.71□□□□□ -0.21
TRAPPC9-208ENST00000520857 SH2D3AQ9BRG2 576 aa13.71□□□□□ -0.21
TRAPPC9-208ENST00000520857 ANAPC7Q9UJX3 599 aa13.71□□□□□ -0.21
TRAPPC9-208ENST00000520857 TTC7AQ9ULT0 858 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC9-208ENST00000520857 NUP98P52948 1817 aa13.71□□□□□ -0.21
TRAPPC9-208ENST00000520857 EME2A4GXA9 379 aaPredicted RBP13.71□□□□□ -0.22
TRAPPC9-208ENST00000520857 EDIL3O43854 480 aa13.71□□□□□ -0.22
TRAPPC9-208ENST00000520857 GAS7O60861 476 aa13.71□□□□□ -0.22
TRAPPC9-208ENST00000520857 DRG2P55039 364 aaKnown RBP13.71□□□□□ -0.22
TRAPPC9-208ENST00000520857 ZRSR2Q15696 482 aaKnown RBP13.71□□□□□ -0.22
TRAPPC9-208ENST00000520857 FBXO11Q86XK2 927 aa13.71□□□□□ -0.22
TRAPPC9-208ENST00000520857 VPS52Q8N1B4 723 aa13.71□□□□□ -0.22
TRAPPC9-208ENST00000520857 WNT8AQ9H1J5 351 aa13.71□□□□□ -0.22
TRAPPC9-208ENST00000520857 IFNB1P01574 187 aa13.7□□□□□ -0.22
TRAPPC9-208ENST00000520857 HOXD13P35453 343 aa13.7□□□□□ -0.22
TRAPPC9-208ENST00000520857 PTGIRP43119 386 aa13.7□□□□□ -0.22
TRAPPC9-208ENST00000520857 RASSF2P50749 326 aa13.7□□□□□ -0.22
TRAPPC9-208ENST00000520857 C2CD6Q53TS8 623 aa13.7□□□□□ -0.22
TRAPPC9-208ENST00000520857 RINT1Q6NUQ1 792 aa13.7□□□□□ -0.22
TRAPPC9-208ENST00000520857 KAT5Q92993 513 aa13.7□□□□□ -0.22
TRAPPC9-208ENST00000520857 TGFB1I1O43294 461 aa13.7□□□□□ -0.22
TRAPPC9-208ENST00000520857 RTN2O75298 545 aa13.7□□□□□ -0.22
TRAPPC9-208ENST00000520857 SGPL1O95470 568 aa13.7□□□□□ -0.22
TRAPPC9-208ENST00000520857 PHLDB3Q6NSJ2 640 aa13.7□□□□□ -0.22
TRAPPC9-208ENST00000520857 SCYL3Q8IZE3 742 aa13.7□□□□□ -0.22
TRAPPC9-208ENST00000520857 CNBD1Q8NA66 436 aa13.7□□□□□ -0.22
TRAPPC9-208ENST00000520857 CKAP2Q8WWK9 683 aa13.7□□□□□ -0.22
TRAPPC9-208ENST00000520857 STMN2Q93045 179 aa13.7□□□□□ -0.22
TRAPPC9-208ENST00000520857 SNF8Q96H20 258 aa13.7□□□□□ -0.22
TRAPPC9-208ENST00000520857 AMNQ9BXJ7 453 aa13.7□□□□□ -0.22
TRAPPC9-208ENST00000520857 MYLK2Q9H1R3 596 aa13.7□□□□□ -0.22
TRAPPC9-208ENST00000520857 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.7□□□□□ -0.229e-7■■■■■ 28.9
TRAPPC9-208ENST00000520857 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.7□□□□□ -0.22
TRAPPC9-208ENST00000520857 NCANO14594 1321 aa13.7□□□□□ -0.22
TRAPPC9-208ENST00000520857 CDH16O75309 829 aa13.7□□□□□ -0.22
TRAPPC9-208ENST00000520857 AP1G2O75843 785 aa13.7□□□□□ -0.22
TRAPPC9-208ENST00000520857 CBX6O95503 412 aa13.7□□□□□ -0.22
TRAPPC9-208ENST00000520857 CACNB3P54284 484 aa13.7□□□□□ -0.22
TRAPPC9-208ENST00000520857 BFSP1Q12934 665 aa13.7□□□□□ -0.22
TRAPPC9-208ENST00000520857 EPC2Q52LR7 807 aa13.7□□□□□ -0.22
TRAPPC9-208ENST00000520857 SLC30A9Q6PML9 568 aa13.7□□□□□ -0.22
TRAPPC9-208ENST00000520857 RFX8Q6ZV50 586 aa13.7□□□□□ -0.22
TRAPPC9-208ENST00000520857 APBB1IPQ7Z5R6 666 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC9-208ENST00000520857 DNAJC18Q9H819 358 aa13.7□□□□□ -0.22
TRAPPC9-208ENST00000520857 SAYSD1Q9NPB0 183 aa13.7□□□□□ -0.22
TRAPPC9-208ENST00000520857 SLCO1B3Q9NPD5 702 aa13.7□□□□□ -0.22
TRAPPC9-208ENST00000520857 NAALADL1Q9UQQ1 740 aa13.7□□□□□ -0.22
TRAPPC9-208ENST00000520857 GPR75-ASB3A0A0A6YYF3 556 aa13.69□□□□□ -0.22
TRAPPC9-208ENST00000520857 O00370 1275 aa13.69□□□□□ -0.22
TRAPPC9-208ENST00000520857 EYA4O95677 639 aa13.69□□□□□ -0.22
TRAPPC9-208ENST00000520857 TTC4O95801 387 aa13.69□□□□□ -0.22
TRAPPC9-208ENST00000520857 FYB2Q5VWT5 728 aa13.69□□□□□ -0.22
TRAPPC9-208ENST00000520857 TMEM154Q6P9G4 183 aa13.69□□□□□ -0.22
TRAPPC9-208ENST00000520857 DTX3LQ8TDB6 740 aa13.69□□□□□ -0.22
TRAPPC9-208ENST00000520857 SMC6Q96SB8 1091 aa13.69□□□□□ -0.22
TRAPPC9-208ENST00000520857 TXLNGYQ9BZA5 131 aa13.69□□□□□ -0.22
TRAPPC9-208ENST00000520857 VCXQ9H320 206 aa13.69□□□□□ -0.22
TRAPPC9-208ENST00000520857 AGPAT3Q9NRZ7 376 aa13.69□□□□□ -0.22
TRAPPC9-208ENST00000520857 CHST7Q9NS84 486 aa13.69□□□□□ -0.22
TRAPPC9-208ENST00000520857 SLC5A4Q9NY91 659 aa13.69□□□□□ -0.22
TRAPPC9-208ENST00000520857 DLGAP2Q9P1A6 1054 aa13.69□□□□□ -0.22
TRAPPC9-208ENST00000520857 PCYOX1Q9UHG3 505 aa13.69□□□□□ -0.22
TRAPPC9-208ENST00000520857 ALS2Q96Q42 1657 aa13.69□□□□□ -0.22
TRAPPC9-208ENST00000520857 COL18A1P39060 1754 aa13.69□□□□□ -0.22
TRAPPC9-208ENST00000520857 EPHB2P29323 1055 aa13.69□□□□□ -0.22
TRAPPC9-208ENST00000520857 CETN2P41208 172 aa13.69□□□□□ -0.22
TRAPPC9-208ENST00000520857 MXI1P50539 228 aa13.69□□□□□ -0.22
TRAPPC9-208ENST00000520857 MIS18BP1Q6P0N0 1132 aa13.69□□□□□ -0.22
TRAPPC9-208ENST00000520857 LINC00116Q8NCU8 138 aa13.69□□□□□ -0.22
TRAPPC9-208ENST00000520857 SPOCK2Q92563 424 aa13.69□□□□□ -0.22
TRAPPC9-208ENST00000520857 GTPBP10A4D1E9 387 aaKnown RBP13.69□□□□□ -0.22
TRAPPC9-208ENST00000520857 UNC5CO95185 931 aa13.69□□□□□ -0.22
TRAPPC9-208ENST00000520857 SPATA31C1P0DKV0 1188 aa13.69□□□□□ -0.22
TRAPPC9-208ENST00000520857 MTM1Q13496 603 aa13.69□□□□□ -0.22
TRAPPC9-208ENST00000520857 CCDC174Q6PII3 467 aa13.69□□□□□ -0.22
TRAPPC9-208ENST00000520857 CYFIP1Q7L576 1253 aa13.69□□□□□ -0.22
TRAPPC9-208ENST00000520857 PRUNE1Q86TP1 453 aa13.69□□□□□ -0.22
TRAPPC9-208ENST00000520857 ZC3H18Q86VM9 953 aaKnown RBP13.69□□□□□ -0.22
TRAPPC9-208ENST00000520857 ECHDC2Q86YB7 292 aa13.69□□□□□ -0.22
TRAPPC9-208ENST00000520857 PPFIBP2Q8ND30 876 aa13.69□□□□□ -0.22
TRAPPC9-208ENST00000520857 TBC1D16Q8TBP0 767 aa13.69□□□□□ -0.22
TRAPPC9-208ENST00000520857 ALG13Q9NP73 1137 aaKnown RBP13.69□□□□□ -0.22
TRAPPC9-208ENST00000520857 A0A0G2JND7 137 aa13.68□□□□□ -0.22
TRAPPC9-208ENST00000520857 TISP43B9A030 160 aa13.68□□□□□ -0.22
TRAPPC9-208ENST00000520857 FAM86B1E9PN63 330 aa13.68□□□□□ -0.22
TRAPPC9-208ENST00000520857 EML1O00423 815 aa13.68□□□□□ -0.22
TRAPPC9-208ENST00000520857 GGPS1O95749 300 aa13.68□□□□□ -0.22
TRAPPC9-208ENST00000520857 FAM86B2P0C5J1 330 aa13.68□□□□□ -0.22
TRAPPC9-208ENST00000520857 CACNA1SQ13698 1873 aa13.68□□□□□ -0.22
TRAPPC9-208ENST00000520857 SPARCL1Q14515 664 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms