RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-208	ENST00000520580	MBTPS1	Q14703	1052 aa		4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	CHRNA2	Q15822	529 aa		4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	THEMIS2	Q5TEJ8	643 aa		4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	ARMC3	Q5W041	872 aa		4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	BICRAL	Q6AI39	1079 aa		4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	BTNL9	Q6UXG8	535 aa		4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	THAP5	Q7Z6K1	395 aa		4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	CLEC10A	Q8IUN9	316 aa		4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	TMTC1	Q8IUR5	882 aa		4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	MSL3	Q8N5Y2	521 aa	Known RBP	4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	GIMAP8	Q8ND71	665 aa	Predicted RBP	4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	SYTL4	Q96C24	671 aa	Predicted RBP	4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	DMRTA2	Q96SC8	542 aa		4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	FAM83C	Q9BQN1	747 aa		4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	HEPH	Q9BQS7	1158 aa		4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	FDXACB1	Q9BRP7	624 aa	Predicted RBP	4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	G6PC3	Q9BUM1	346 aa		4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	C7orf69	Q9H7B7	122 aa		4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	PNPO	Q9NVS9	261 aa		4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	DENND2A	Q9ULE3	1009 aa		4.26	□□□□□ -1.73
SREK1-208	ENST00000520580		A0A1W2PQ45	241 aa	Predicted RBP	4.26	□□□□□ -1.73
SREK1-208	ENST00000520580		A0A1W2PQY0	241 aa		4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	FAM234B	A2RU67	622 aa		4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	NPC1	O15118	1278 aa		4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	AKR1B10	O60218	316 aa		4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	CNOT4	O95628	575 aa	Known RBP	4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	NDST3	O95803	873 aa		4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	F13B	P05160	661 aa		4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	SPATA31C1	P0DKV0	1188 aa		4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	FGFR2	P21802	821 aa		4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	GALK1	P51570	392 aa		4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	MGAT2	Q10469	447 aa		4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	DBP	Q10586	325 aa	Predicted RBP	4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	SURF1	Q15526	300 aa		4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	SLC45A4	Q5BKX6	768 aa		4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	MZT2B	Q6NZ67	158 aa		4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	TMPRSS7	Q7RTY8	843 aa		4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	PPP1R3B	Q86XI6	285 aa		4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	ATP11C	Q8NB49	1132 aa		4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	PCSK9	Q8NBP7	692 aa	Known RBP	4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	FBXO18	Q8NFZ0	1043 aa		4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	IPO4	Q8TEX9	1081 aa	Known RBP	4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	FOXB1	Q99853	325 aa		4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	DBNDD2	Q9BQY9	259 aa		4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	RBM12	Q9NTZ6	932 aa	Known RBP	4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	COL20A1	Q9P218	1284 aa		4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	TNFRSF10D	Q9UBN6	386 aa		4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	GJD2	Q9UKL4	321 aa		4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	JAG2	Q9Y219	1238 aa		4.26	□□□□□ -1.73
SREK1-208	ENST00000520580	SLC16A6	O15403	523 aa		4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	IRAK2	O43187	625 aa		4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	AHSG	P02765	367 aa		4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	RPLP2	P05387	115 aa	Known RBP	4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	TYR	P14679	529 aa		4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	RPL17	P18621	184 aa	Known RBP	4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	KRT9	P35527	623 aa		4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	AFM	P43652	599 aa		4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	CLCN7	P51798	805 aa		4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	ARHGAP15	Q53QZ3	475 aa		4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	ZNF385C	Q66K41	422 aa	Predicted RBP	4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	RFX8	Q6ZV50	586 aa		4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	CABP7	Q86V35	215 aa		4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	TRIM48	Q8IWZ4	208 aa		4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	GALNT15	Q8N3T1	639 aa		4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	TMX3	Q96JJ7	454 aa		4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	SAMD11	Q96NU1	681 aa		4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	BRIP1	Q9BX63	1249 aa		4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	AP5M1	Q9H0R1	490 aa		4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	CCDC39	Q9UFE4	941 aa		4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	TAF6L	Q9Y6J9	622 aa		4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	PODXL	O00592	558 aa		4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	TH	P07101	528 aa		4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	PTGS1	P23219	599 aa		4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	CTSS	P25774	331 aa		4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	CD96	P40200	585 aa		4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	PHKA1	P46020	1223 aa		4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	TARDBP	Q13148	414 aa	Known RBP eCLIP	4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	SPARCL1	Q14515	664 aa		4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	NBPF8	Q3BBV2	869 aa		4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	RALGPS1	Q5JS13	557 aa		4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	SULT6B1	Q6IMI4	303 aa		4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	CYP4F22	Q6NT55	531 aa		4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	FBXO38	Q6PIJ6	1188 aa		4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	RSPH3	Q86UC2	560 aa		4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	ADGRG2	Q8IZP9	1017 aa		4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	PHOSPHO1	Q8TCT1	267 aa		4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	STYX	Q8WUJ0	223 aa		4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	UCMA	Q8WVF2	138 aa		4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	RUBCN	Q92622	972 aa		4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	HDAC2	Q92769	488 aa	Known RBP	4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	IQCD	Q96DY2	449 aa		4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	AMN	Q9BXJ7	453 aa		4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	STK33	Q9BYT3	514 aa		4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	ADAMTS10	Q9H324	1103 aa		4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	SARS2	Q9NP81	518 aa	Known RBP	4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	RASSF1	Q9NS23	344 aa		4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	FTSJ1	Q9UET6	329 aa		4.25	□□□□□ -1.73
SREK1-208	ENST00000520580	ZC3H7B	Q9UGR2	993 aa	Known RBP	4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 82 ms