RNA–Protein interactions for RNA: ENST00000520158.5

CTNNA1-219, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 719 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-219ENST00000520158 AMHR2Q16671 573 aa6.3□□□□□ -1.4
CTNNA1-219ENST00000520158 EARS2Q5JPH6 523 aaKnown RBP6.3□□□□□ -1.4
CTNNA1-219ENST00000520158 ATAT1Q5SQI0 421 aa6.3□□□□□ -1.4
CTNNA1-219ENST00000520158 PLA2G4FQ68DD2 849 aa6.3□□□□□ -1.4
CTNNA1-219ENST00000520158 C15orf39Q6ZRI6 1047 aa6.3□□□□□ -1.4
CTNNA1-219ENST00000520158 PIK3AP1Q6ZUJ8 805 aa6.3□□□□□ -1.4
CTNNA1-219ENST00000520158 GPR149Q86SP6 731 aa6.3□□□□□ -1.4
CTNNA1-219ENST00000520158 TMEM173Q86WV6 379 aaPredicted RBP6.3□□□□□ -1.4
CTNNA1-219ENST00000520158 ZNF280BQ86YH2 543 aa6.3□□□□□ -1.4
CTNNA1-219ENST00000520158 SMG8Q8ND04 991 aaKnown RBP6.3□□□□□ -1.4
CTNNA1-219ENST00000520158 PRSS33Q8NF86 280 aa6.3□□□□□ -1.4
CTNNA1-219ENST00000520158 CMASQ8NFW8 434 aaPredicted RBP6.3□□□□□ -1.4
CTNNA1-219ENST00000520158 OXER1Q8TDS5 423 aa6.3□□□□□ -1.4
CTNNA1-219ENST00000520158 HDAC7Q8WUI4 952 aa6.3□□□□□ -1.4
CTNNA1-219ENST00000520158 BCL7CQ8WUZ0 217 aaPredicted RBP6.3□□□□□ -1.4
CTNNA1-219ENST00000520158 LPPQ93052 612 aa6.3□□□□□ -1.4
CTNNA1-219ENST00000520158 RIPOR3Q96MK2 946 aa6.3□□□□□ -1.4
CTNNA1-219ENST00000520158 SCLT1Q96NL6 688 aa6.3□□□□□ -1.4
CTNNA1-219ENST00000520158 MTMR9Q96QG7 549 aa6.3□□□□□ -1.4
CTNNA1-219ENST00000520158 SH2D3AQ9BRG2 576 aa6.3□□□□□ -1.4
CTNNA1-219ENST00000520158 LARP6Q9BRS8 491 aaKnown RBP6.3□□□□□ -1.4
CTNNA1-219ENST00000520158 LXNQ9BS40 222 aa6.3□□□□□ -1.4
CTNNA1-219ENST00000520158 VN1R3Q9BXE9 311 aa6.3□□□□□ -1.4
CTNNA1-219ENST00000520158 POMKQ9H5K3 350 aa6.3□□□□□ -1.4
CTNNA1-219ENST00000520158 RSAD1Q9HA92 442 aa6.3□□□□□ -1.4
CTNNA1-219ENST00000520158 XPNPEP1Q9NQW7 623 aa6.3□□□□□ -1.4
CTNNA1-219ENST00000520158 RGL1Q9NZL6 768 aa6.3□□□□□ -1.4
CTNNA1-219ENST00000520158 ORC3Q9UBD5 711 aaPredicted RBP6.3□□□□□ -1.4
CTNNA1-219ENST00000520158 DNAJB4Q9UDY4 337 aa6.3□□□□□ -1.4
CTNNA1-219ENST00000520158 PCDHA12Q9UN75 941 aa6.3□□□□□ -1.4
CTNNA1-219ENST00000520158 SORCS3Q9UPU3 1222 aa6.3□□□□□ -1.4
CTNNA1-219ENST00000520158 PIN4Q9Y237 131 aaKnown RBP6.3□□□□□ -1.4
CTNNA1-219ENST00000520158 SSX2IPQ9Y2D8 614 aa6.3□□□□□ -1.4
CTNNA1-219ENST00000520158 DENND4AQ7Z401 1863 aa6.3□□□□□ -1.4
CTNNA1-219ENST00000520158 ARID2Q68CP9 1835 aa6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 MTCL1Q9Y4B5 1905 aaKnown RBP6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 A0A1B0GUA9 196 aa6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 PROB1E7EW31 1015 aa6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 NRP1O14786 923 aa6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 B4GALT3O60512 393 aa6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 TSPAN1O60635 241 aa6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 ZC3H11AO75152 810 aaKnown RBP eCLIP6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 CSPG5O95196 566 aa6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 SOD2P04179 222 aa6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 SRGAP2CP0DJJ0 459 aa6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 IBSPP21815 317 aaPredicted RBP6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 MUTP22033 750 aa6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 KRT2P35908 639 aa6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 RARRES1P49788 294 aa6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 CLCN4P51793 760 aa6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 AK2P54819 239 aa6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 RNASELQ05823 741 aaKnown RBP6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 TCF15Q12870 199 aa6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 MTMR3Q13615 1198 aa6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 EMC2Q15006 297 aa6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 PTPN14Q15678 1187 aa6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 KIAA0319Q5VV43 1072 aa6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 LLGL2Q6P1M3 1020 aa6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 NOTUMQ6P988 496 aa6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 TMEM92Q6UXU6 159 aa6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 DNAJC14Q6Y2X3 702 aaPredicted RBP6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 SUGP1Q8IWZ8 645 aaKnown RBP6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 COLGALT2Q8IYK4 626 aa6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 RNF149Q8NC42 400 aa6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 RNF169Q8NCN4 708 aa6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 KREMEN2Q8NCW0 462 aa6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 GSTCDQ8NEC7 633 aa6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 URGCPQ8TCY9 931 aa6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 TMEM143Q96AN5 459 aa6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 DYDC2Q96IM9 177 aa6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 NLRP4Q96MN2 994 aa6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 KLHL5Q96PQ7 755 aa6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 MTRQ99707 1265 aa6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 EIF2AK1Q9BQI3 630 aaKnown RBP6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 EMILIN2Q9BXX0 1053 aa6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 CSRNP2Q9H175 543 aa6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 RXFP1Q9HBX9 757 aa6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 CHST7Q9NS84 486 aa6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 GJB4Q9NTQ9 266 aa6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 DPP7Q9UHL4 492 aa6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 FAN1Q9Y2M0 1017 aa6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 GIT1Q9Y2X7 761 aa6.29□□□□□ -1.4
CTNNA1-219ENST00000520158 WDFY4Q6ZS81 3184 aa6.28□□□□□ -1.4
CTNNA1-219ENST00000520158 ZDBF2Q9HCK1 2354 aa6.28□□□□□ -1.4
CTNNA1-219ENST00000520158 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.28□□□□□ -1.4
CTNNA1-219ENST00000520158 GOLGA6L3A6NEY3 463 aa6.28□□□□□ -1.4
CTNNA1-219ENST00000520158 ARL5CA6NH57 179 aa6.28□□□□□ -1.4
CTNNA1-219ENST00000520158 C2CD4DB7Z1M9 353 aa6.28□□□□□ -1.4
CTNNA1-219ENST00000520158 ZBTB39O15060 712 aa6.28□□□□□ -1.4
CTNNA1-219ENST00000520158 CNPP09543 421 aaKnown RBP6.28□□□□□ -1.4
CTNNA1-219ENST00000520158 SPATA31C1P0DKV0 1188 aa6.28□□□□□ -1.4
CTNNA1-219ENST00000520158 ITGA4P13612 1032 aa6.28□□□□□ -1.4
CTNNA1-219ENST00000520158 EPCAMP16422 314 aa6.28□□□□□ -1.4
CTNNA1-219ENST00000520158 SCP2P22307 547 aa6.28□□□□□ -1.4
CTNNA1-219ENST00000520158 CLCN5P51795 746 aa6.28□□□□□ -1.4
CTNNA1-219ENST00000520158 DSG1Q02413 1049 aa6.28□□□□□ -1.4
CTNNA1-219ENST00000520158 MBTD1Q05BQ5 628 aa6.28□□□□□ -1.4
CTNNA1-219ENST00000520158 NCBP1Q09161 790 aaKnown RBP6.28□□□□□ -1.4
CTNNA1-219ENST00000520158 FOXD4Q12950 439 aaPredicted RBP6.28□□□□□ -1.4
CTNNA1-219ENST00000520158 NR5A1Q13285 461 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms