RNA–Protein interactions for RNA: ENST00000519583.5

CLK4-203, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,462 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-203ENST00000519583 L2HGDHQ9H9P8 463 aa8.68□□□□□ -1.02
CLK4-203ENST00000519583 NLRC4Q9NPP4 1024 aa8.68□□□□□ -1.02
CLK4-203ENST00000519583 PITPNM1O00562 1244 aa8.68□□□□□ -1.02
CLK4-203ENST00000519583 URI1O94763 535 aaPredicted RBP8.68□□□□□ -1.02
CLK4-203ENST00000519583 AFPP02771 609 aaKnown RBP8.68□□□□□ -1.02
CLK4-203ENST00000519583 CKBP12277 381 aa8.68□□□□□ -1.02
CLK4-203ENST00000519583 KLRC1P26715 233 aa8.68□□□□□ -1.02
CLK4-203ENST00000519583 MTERF2Q49AM1 385 aa8.68□□□□□ -1.02
CLK4-203ENST00000519583 FAM102BQ5T8I3 360 aa8.68□□□□□ -1.02
CLK4-203ENST00000519583 PDXDC1Q6P996 788 aa8.68□□□□□ -1.02
CLK4-203ENST00000519583 METTL14Q9HCE5 456 aaKnown RBP8.68□□□□□ -1.02
CLK4-203ENST00000519583 PLAGL2Q9UPG8 496 aa8.68□□□□□ -1.02
CLK4-203ENST00000519583 COL1A2P08123 1366 aa8.68□□□□□ -1.02
CLK4-203ENST00000519583 MBLAC1A4D2B0 266 aaPredicted RBP8.67□□□□□ -1.02
CLK4-203ENST00000519583 KIF5CO60282 957 aa8.67□□□□□ -1.02
CLK4-203ENST00000519583 HNRNPH3P31942 346 aaKnown RBP8.67□□□□□ -1.02
CLK4-203ENST00000519583 CYLC1P35663 651 aaPredicted RBP8.67□□□□□ -1.02
CLK4-203ENST00000519583 POLR2FP61218 127 aaKnown RBP8.67□□□□□ -1.02
CLK4-203ENST00000519583 RBM10P98175 930 aaKnown RBP8.67□□□□□ -1.02
CLK4-203ENST00000519583 NFIL3Q16649 462 aa8.67□□□□□ -1.02
CLK4-203ENST00000519583 TRIM71Q2Q1W2 868 aaKnown RBP8.67□□□□□ -1.02
CLK4-203ENST00000519583 TAF2Q6P1X5 1199 aa8.67□□□□□ -1.02
CLK4-203ENST00000519583 MTHFD1LQ6UB35 978 aa8.67□□□□□ -1.02
CLK4-203ENST00000519583 LRRC8DQ7L1W4 858 aa8.67□□□□□ -1.02
CLK4-203ENST00000519583 FAM186BQ8IYM0 893 aa8.67□□□□□ -1.02
CLK4-203ENST00000519583 METTL13Q8N6R0 699 aa8.67□□□□□ -1.02
CLK4-203ENST00000519583 DNAJB3Q8WWF6 145 aa8.67□□□□□ -1.02
CLK4-203ENST00000519583 CEP170P1Q96L14 293 aa8.67□□□□□ -1.02
CLK4-203ENST00000519583 DRC1Q96MC2 740 aa8.67□□□□□ -1.02
CLK4-203ENST00000519583 TRIM10Q9UDY6 481 aa8.67□□□□□ -1.02
CLK4-203ENST00000519583 TFR2Q9UP52 801 aa8.67□□□□□ -1.02
CLK4-203ENST00000519583 WDR81Q562E7 1941 aa8.67□□□□□ -1.02
CLK4-203ENST00000519583 ZBTB42B2RXF5 422 aa8.67□□□□□ -1.02
CLK4-203ENST00000519583 STBD1O95210 358 aa8.67□□□□□ -1.02
CLK4-203ENST00000519583 IQCF3P0C7M6 154 aa8.67□□□□□ -1.02
CLK4-203ENST00000519583 SELPP16109 830 aa8.67□□□□□ -1.02
CLK4-203ENST00000519583 PSMC2P35998 433 aaKnown RBP8.67□□□□□ -1.02
CLK4-203ENST00000519583 PEX3P56589 373 aa8.67□□□□□ -1.02
CLK4-203ENST00000519583 CDK17Q00537 523 aa8.67□□□□□ -1.02
CLK4-203ENST00000519583 PPIGQ13427 754 aaKnown RBP eCLIP8.67□□□□□ -1.023e-11■■□□□ 12.2
CLK4-203ENST00000519583 NAA30Q147X3 362 aaPredicted RBP8.67□□□□□ -1.02
CLK4-203ENST00000519583 ZNF569Q5MCW4 686 aa8.67□□□□□ -1.02
CLK4-203ENST00000519583 ZNF618Q5T7W0 954 aa8.67□□□□□ -1.02
CLK4-203ENST00000519583 RSPH3Q86UC2 560 aa8.67□□□□□ -1.02
CLK4-203ENST00000519583 SLC35C1Q96A29 364 aa8.67□□□□□ -1.02
CLK4-203ENST00000519583 CEP72Q9P209 647 aa8.67□□□□□ -1.02
CLK4-203ENST00000519583 ARHGAP20Q9P2F6 1191 aa8.67□□□□□ -1.02
CLK4-203ENST00000519583 LTBP2Q14767 1821 aa8.67□□□□□ -1.02
CLK4-203ENST00000519583 TISP43B9A030 160 aa8.67□□□□□ -1.02
CLK4-203ENST00000519583 SLC16A4O15374 487 aa8.67□□□□□ -1.02
CLK4-203ENST00000519583 SLU7O95391 586 aaKnown RBP8.67□□□□□ -1.02
CLK4-203ENST00000519583 ACRP10323 421 aa8.67□□□□□ -1.02
CLK4-203ENST00000519583 ACTN1P12814 892 aa8.67□□□□□ -1.02
CLK4-203ENST00000519583 PPP2R3AQ06190 1150 aa8.67□□□□□ -1.02
CLK4-203ENST00000519583 DEFB128Q7Z7B8 93 aa8.67□□□□□ -1.02
CLK4-203ENST00000519583 CCDC170Q8IYT3 715 aa8.67□□□□□ -1.02
CLK4-203ENST00000519583 LRRN4CLQ8ND94 238 aa8.67□□□□□ -1.02
CLK4-203ENST00000519583 BORCS6Q96GS4 357 aa8.67□□□□□ -1.02
CLK4-203ENST00000519583 TIPINQ9BVW5 301 aa8.67□□□□□ -1.02
CLK4-203ENST00000519583 EDEM3Q9BZQ6 932 aa8.67□□□□□ -1.02
CLK4-203ENST00000519583 DMAC2Q9NW81 257 aa8.67□□□□□ -1.02
CLK4-203ENST00000519583 COLQQ9Y215 455 aaPredicted RBP8.67□□□□□ -1.02
CLK4-203ENST00000519583 C22orf31O95567 290 aa8.66□□□□□ -1.02
CLK4-203ENST00000519583 MAPTP10636 758 aaKnown RBP8.66□□□□□ -1.02
CLK4-203ENST00000519583 SLC9A1P19634 815 aa8.66□□□□□ -1.02
CLK4-203ENST00000519583 EPHB4P54760 987 aa8.66□□□□□ -1.02
CLK4-203ENST00000519583 CYP27A1Q02318 531 aa8.66□□□□□ -1.02
CLK4-203ENST00000519583 TMEM62Q0P6H9 643 aa8.66□□□□□ -1.02
CLK4-203ENST00000519583 OTUD6AQ7L8S5 288 aa8.66□□□□□ -1.02
CLK4-203ENST00000519583 HAUS6Q7Z4H7 955 aa8.66□□□□□ -1.02
CLK4-203ENST00000519583 KIAA1328Q86T90 577 aa8.66□□□□□ -1.02
CLK4-203ENST00000519583 GOLGA5Q8TBA6 731 aa8.66□□□□□ -1.02
CLK4-203ENST00000519583 CCDC42Q96M95 316 aa8.66□□□□□ -1.02
CLK4-203ENST00000519583 ACCSQ96QU6 501 aa8.66□□□□□ -1.02
CLK4-203ENST00000519583 KIFC3Q9BVG8 833 aa8.66□□□□□ -1.02
CLK4-203ENST00000519583 NIFKQ9BYG3 293 aaKnown RBP8.66□□□□□ -1.02
CLK4-203ENST00000519583 GANQ9H2C0 597 aa8.66□□□□□ -1.02
CLK4-203ENST00000519583 SUGCTQ9HAC7 445 aa8.66□□□□□ -1.02
CLK4-203ENST00000519583 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.66□□□□□ -1.02
CLK4-203ENST00000519583 V9GYY5 206 aaPredicted RBP8.66□□□□□ -1.02
CLK4-203ENST00000519583 EIF3CLB5ME19 914 aaKnown RBP8.66□□□□□ -1.02
CLK4-203ENST00000519583 RBAK-RBAKDNI3L0D1 243 aa8.66□□□□□ -1.02
CLK4-203ENST00000519583 MAGEB2O15479 319 aa8.66□□□□□ -1.02
CLK4-203ENST00000519583 IPO7O95373 1038 aaKnown RBP8.66□□□□□ -1.02
CLK4-203ENST00000519583 EIF4A3P38919 411 aaKnown RBP8.66□□□□□ -1.02
CLK4-203ENST00000519583 CLCN3P51790 818 aa8.66□□□□□ -1.02
CLK4-203ENST00000519583 KRT83P78385 493 aa8.66□□□□□ -1.02
CLK4-203ENST00000519583 ALCAMQ13740 583 aa8.66□□□□□ -1.02
CLK4-203ENST00000519583 EXOC3L4Q17RC7 722 aa8.66□□□□□ -1.02
CLK4-203ENST00000519583 ZNF710Q8N1W2 664 aa8.66□□□□□ -1.02
CLK4-203ENST00000519583 SLC35F6Q8N357 371 aa8.66□□□□□ -1.02
CLK4-203ENST00000519583 EIF3CQ99613 913 aaKnown RBP8.66□□□□□ -1.02
CLK4-203ENST00000519583 MKNK1Q9BUB5 465 aa8.66□□□□□ -1.02
CLK4-203ENST00000519583 IL23AQ9NPF7 189 aa8.66□□□□□ -1.02
CLK4-203ENST00000519583 FRMD4BQ9Y2L6 1034 aa8.66□□□□□ -1.02
CLK4-203ENST00000519583 SMIM35A0A1B0GVV1 85 aa8.66□□□□□ -1.02
CLK4-203ENST00000519583 CCDC169A6NNP5 214 aa8.66□□□□□ -1.02
CLK4-203ENST00000519583 ZNF263O14978 683 aa8.66□□□□□ -1.02
CLK4-203ENST00000519583 EXOC3O60645 756 aa8.66□□□□□ -1.02
CLK4-203ENST00000519583 NCBP1Q09161 790 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms