RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-210	ENST00000519362	C8orf74	Q6P047	294 aa		13.36	□□□□□ -0.27
SPIDR-210	ENST00000519362	METTL7B	Q6UX53	244 aa		13.36	□□□□□ -0.27
SPIDR-210	ENST00000519362	DAAM2	Q86T65	1068 aa		13.36	□□□□□ -0.27
SPIDR-210	ENST00000519362	PPM1K	Q8N3J5	372 aa		13.36	□□□□□ -0.27
SPIDR-210	ENST00000519362	AEN	Q8WTP8	325 aa	Known RBP	13.36	□□□□□ -0.27
SPIDR-210	ENST00000519362	ZC3H15	Q8WU90	426 aa	Known RBP	13.36	□□□□□ -0.27
SPIDR-210	ENST00000519362	SLC7A3	Q8WY07	619 aa		13.36	□□□□□ -0.27
SPIDR-210	ENST00000519362	ARHGEF26	Q96DR7	871 aa		13.36	□□□□□ -0.27
SPIDR-210	ENST00000519362	BICD1	Q96G01	975 aa		13.36	□□□□□ -0.27
SPIDR-210	ENST00000519362	HES6	Q96HZ4	224 aa		13.36	□□□□□ -0.27
SPIDR-210	ENST00000519362	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.36	□□□□□ -0.27
SPIDR-210	ENST00000519362	FGD4	Q96M96	766 aa		13.36	□□□□□ -0.27
SPIDR-210	ENST00000519362	FAM213A	Q9BRX8	229 aa		13.36	□□□□□ -0.27
SPIDR-210	ENST00000519362	THAP2	Q9H0W7	228 aa		13.36	□□□□□ -0.27
SPIDR-210	ENST00000519362	KIAA1586	Q9HCI6	787 aa		13.36	□□□□□ -0.27
SPIDR-210	ENST00000519362	TXNRD2	Q9NNW7	524 aa		13.36	□□□□□ -0.27
SPIDR-210	ENST00000519362	RBPJL	Q9UBG7	517 aa		13.36	□□□□□ -0.27
SPIDR-210	ENST00000519362	ZNF233	A6NK53	670 aa		13.36	□□□□□ -0.27
SPIDR-210	ENST00000519362	KIAA0391	O15091	583 aa	Known RBP	13.36	□□□□□ -0.27
SPIDR-210	ENST00000519362	BUB1B	O60566	1050 aa	Predicted RBP	13.36	□□□□□ -0.27
SPIDR-210	ENST00000519362	SGPL1	O95470	568 aa		13.36	□□□□□ -0.27
SPIDR-210	ENST00000519362	CHRNB2	P17787	502 aa		13.36	□□□□□ -0.27
SPIDR-210	ENST00000519362	ABCB4	P21439	1286 aa		13.36	□□□□□ -0.27
SPIDR-210	ENST00000519362	NF2	P35240	595 aa		13.36	□□□□□ -0.27
SPIDR-210	ENST00000519362	COPB2	P35606	906 aa		13.36	□□□□□ -0.27
SPIDR-210	ENST00000519362	RFC5	P40937	340 aa		13.36	□□□□□ -0.27
SPIDR-210	ENST00000519362	LIG4	P49917	911 aa		13.36	□□□□□ -0.27
SPIDR-210	ENST00000519362	SLC7A5	Q01650	507 aa		13.36	□□□□□ -0.27
SPIDR-210	ENST00000519362	NOP9	Q86U38	636 aa	Known RBP	13.36	□□□□□ -0.27
SPIDR-210	ENST00000519362	GSPT2	Q8IYD1	628 aa	Known RBP	13.36	□□□□□ -0.27
SPIDR-210	ENST00000519362	RPUSD2	Q8IZ73	545 aa	Known RBP	13.36	□□□□□ -0.27
SPIDR-210	ENST00000519362	RASGEF1C	Q8N431	466 aa		13.36	□□□□□ -0.27
SPIDR-210	ENST00000519362	METTL13	Q8N6R0	699 aa		13.36	□□□□□ -0.27
SPIDR-210	ENST00000519362	SCFD2	Q8WU76	684 aa		13.36	□□□□□ -0.27
SPIDR-210	ENST00000519362	PSPC1	Q8WXF1	523 aa	Known RBP	13.36	□□□□□ -0.27
SPIDR-210	ENST00000519362	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.35	□□□□□ -0.27
SPIDR-210	ENST00000519362	DNAJC25-GNG10	A0A024R161	153 aa		13.35	□□□□□ -0.27
SPIDR-210	ENST00000519362	ZC3H11A	O75152	810 aa	Known RBP eCLIP	13.35	□□□□□ -0.27
SPIDR-210	ENST00000519362	GGPS1	O95749	300 aa		13.35	□□□□□ -0.27
SPIDR-210	ENST00000519362	DLAT	P10515	647 aa	Known RBP	13.35	□□□□□ -0.27
SPIDR-210	ENST00000519362	GZMA	P12544	262 aa		13.35	□□□□□ -0.27
SPIDR-210	ENST00000519362	STAT5B	P51692	787 aa		13.35	□□□□□ -0.27
SPIDR-210	ENST00000519362	MRPS25	P82663	173 aa	Known RBP	13.35	□□□□□ -0.27
SPIDR-210	ENST00000519362	STRN3	Q13033	797 aa		13.35	□□□□□ -0.27
SPIDR-210	ENST00000519362	GPS2	Q13227	327 aa		13.35	□□□□□ -0.27
SPIDR-210	ENST00000519362	PSMD6	Q15008	389 aa		13.35	□□□□□ -0.27
SPIDR-210	ENST00000519362		Q3C1V9	767 aa		13.35	□□□□□ -0.27
SPIDR-210	ENST00000519362	FAM160B1	Q5W0V3	765 aa		13.35	□□□□□ -0.27
SPIDR-210	ENST00000519362	SEPT1	Q8WYJ6	367 aa		13.35	□□□□□ -0.27
SPIDR-210	ENST00000519362	ZNF516	Q92618	1163 aa		13.35	□□□□□ -0.27
SPIDR-210	ENST00000519362	CALR3	Q96L12	384 aa	Known RBP	13.35	□□□□□ -0.27
SPIDR-210	ENST00000519362	NT5C1B	Q96P26	610 aa		13.35	□□□□□ -0.27
SPIDR-210	ENST00000519362	PCDHB18P	Q96TA0	734 aa		13.35	□□□□□ -0.27
SPIDR-210	ENST00000519362	SYT17	Q9BSW7	474 aa		13.35	□□□□□ -0.27
SPIDR-210	ENST00000519362	SELENOO	Q9BVL4	669 aa		13.35	□□□□□ -0.27
SPIDR-210	ENST00000519362	HAPLN2	Q9GZV7	340 aa		13.35	□□□□□ -0.27
SPIDR-210	ENST00000519362	ZCCHC17	Q9NP64	241 aa	Known RBP	13.35	□□□□□ -0.27
SPIDR-210	ENST00000519362	NRBP2	Q9NSY0	501 aa		13.35	□□□□□ -0.27
SPIDR-210	ENST00000519362	SEPT11	Q9NVA2	429 aa	Known RBP	13.35	□□□□□ -0.27
SPIDR-210	ENST00000519362	COG5	Q9UP83	839 aa		13.35	□□□□□ -0.27
SPIDR-210	ENST00000519362	CYP26A1	O43174	497 aa		13.34	□□□□□ -0.27
SPIDR-210	ENST00000519362	RTN2	O75298	545 aa		13.34	□□□□□ -0.27
SPIDR-210	ENST00000519362	MAF	O75444	373 aa	Predicted RBP	13.34	□□□□□ -0.27
SPIDR-210	ENST00000519362	ARIH2	O95376	493 aa		13.34	□□□□□ -0.27
SPIDR-210	ENST00000519362	FTL	P02792	175 aa	Predicted RBP	13.34	□□□□□ -0.27
SPIDR-210	ENST00000519362	TCF7	P36402	384 aa	Predicted RBP	13.34	□□□□□ -0.27
SPIDR-210	ENST00000519362	AARS	P49588	968 aa	Known RBP eCLIP	13.34	□□□□□ -0.27
SPIDR-210	ENST00000519362	GCNT1	Q02742	428 aa		13.34	□□□□□ -0.27
SPIDR-210	ENST00000519362	LY6K	Q17RY6	165 aa		13.34	□□□□□ -0.27
SPIDR-210	ENST00000519362	CRELD2	Q6UXH1	353 aa	Predicted RBP	13.34	□□□□□ -0.27
SPIDR-210	ENST00000519362	SLC47A2	Q86VL8	602 aa		13.34	□□□□□ -0.27
SPIDR-210	ENST00000519362	RHOT2	Q8IXI1	618 aa		13.34	□□□□□ -0.27
SPIDR-210	ENST00000519362	DEPTOR	Q8TB45	409 aa		13.34	□□□□□ -0.27
SPIDR-210	ENST00000519362	OPTN	Q96CV9	577 aa		13.34	□□□□□ -0.27
SPIDR-210	ENST00000519362	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	13.34	□□□□□ -0.27	1e-9	■■□□□ 11.6
SPIDR-210	ENST00000519362	TMEM134	Q9H6X4	195 aa		13.34	□□□□□ -0.27
SPIDR-210	ENST00000519362	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	13.34	□□□□□ -0.27	2e-9	■■■■■ 223.6
SPIDR-210	ENST00000519362	GDF3	Q9NR23	364 aa		13.34	□□□□□ -0.27
SPIDR-210	ENST00000519362	AMFR	Q9UKV5	643 aa		13.34	□□□□□ -0.27
SPIDR-210	ENST00000519362	AGO2	Q9UKV8	859 aa	Known RBP	13.34	□□□□□ -0.27
SPIDR-210	ENST00000519362	HPCAL4	Q9UM19	191 aa		13.34	□□□□□ -0.27
SPIDR-210	ENST00000519362	PPME1	Q9Y570	386 aa		13.34	□□□□□ -0.27
SPIDR-210	ENST00000519362	LRRIQ4	A6NIV6	560 aa		13.34	□□□□□ -0.27
SPIDR-210	ENST00000519362		K7ERI5	159 aa		13.34	□□□□□ -0.27
SPIDR-210	ENST00000519362	POLR3G	O15318	223 aa	Predicted RBP	13.34	□□□□□ -0.27
SPIDR-210	ENST00000519362	PGK2	P07205	417 aa		13.34	□□□□□ -0.27
SPIDR-210	ENST00000519362	GLI1	P08151	1106 aa		13.34	□□□□□ -0.27
SPIDR-210	ENST00000519362	CYP11B1	P15538	503 aa		13.34	□□□□□ -0.27
SPIDR-210	ENST00000519362	EPHX2	P34913	555 aa		13.34	□□□□□ -0.27
SPIDR-210	ENST00000519362	USP8	P40818	1118 aa		13.34	□□□□□ -0.27
SPIDR-210	ENST00000519362	NLRP11	P59045	1033 aa	Known RBP	13.34	□□□□□ -0.27
SPIDR-210	ENST00000519362	RNASE9	P60153	205 aa	Known RBP	13.34	□□□□□ -0.27
SPIDR-210	ENST00000519362	FMO1	Q01740	532 aa		13.34	□□□□□ -0.27
SPIDR-210	ENST00000519362	PTPRO	Q16827	1216 aa		13.34	□□□□□ -0.27
SPIDR-210	ENST00000519362	SLFN12L	Q6IEE8	588 aa		13.34	□□□□□ -0.27
SPIDR-210	ENST00000519362	GPAT2	Q6NUI2	795 aa		13.34	□□□□□ -0.27
SPIDR-210	ENST00000519362	KCNV1	Q6PIU1	500 aa		13.34	□□□□□ -0.27
SPIDR-210	ENST00000519362	ENOSF1	Q7L5Y1	443 aa		13.34	□□□□□ -0.27
SPIDR-210	ENST00000519362	FASTKD5	Q7L8L6	764 aa	Known RBP	13.34	□□□□□ -0.27
SPIDR-210	ENST00000519362	EEPD1	Q7L9B9	569 aa		13.34	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms