RNA–Protein interactions for RNA: ENST00000518855.5

CLINT1-202, Transcript of clathrin interactor 1, humanhuman

TSL 2

Gene CLINT1, Length 3,394 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-202ENST00000518855 KRT71Q3SY84 523 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 RNF187Q5TA31 235 aaPredicted RBP5.53□□□□□ -1.52
CLINT1-202ENST00000518855 BZW1Q7L1Q6 419 aaKnown RBP5.53□□□□□ -1.52
CLINT1-202ENST00000518855 CELF1Q92879 486 aaKnown RBP5.53□□□□□ -1.52
CLINT1-202ENST00000518855 CDK5RAP3Q96JB5 506 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 FAM20AQ96MK3 541 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 PIGSQ96S52 555 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 TRIM6Q9C030 488 aaPredicted RBP5.53□□□□□ -1.52
CLINT1-202ENST00000518855 DDX47Q9H0S4 455 aaKnown RBP5.53□□□□□ -1.52
CLINT1-202ENST00000518855 DEFB129Q9H1M3 183 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 LRRC4CQ9HCJ2 640 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 LNPEPQ9UIQ6 1025 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 VAV3Q9UKW4 847 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 ATRNL1Q5VV63 1379 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 BUB1BO60566 1050 aaPredicted RBP5.53□□□□□ -1.52
CLINT1-202ENST00000518855 XRCC5P13010 732 aaKnown RBP5.53□□□□□ -1.52
CLINT1-202ENST00000518855 TXKP42681 527 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 YARSP54577 528 aaKnown RBP5.53□□□□□ -1.52
CLINT1-202ENST00000518855 DENND2CQ68D51 928 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 MSL1Q68DK7 614 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 MIS18BP1Q6P0N0 1132 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 VSTM1Q6UX27 236 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 B3GNT9Q6UX72 402 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 ZNF444Q8N0Y2 327 aaPredicted RBP5.53□□□□□ -1.52
CLINT1-202ENST00000518855 ANKRD13CQ8N6S4 541 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 PRELID2Q8N945 189 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 OR2W6PQ8NHA6 318 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 MAGEB18Q96M61 343 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 ZNF570Q96NI8 536 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 EYA3Q99504 573 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 ZSWIM1Q9BR11 485 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 CCDC28BQ9BUN5 200 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 ST6GALNAC4Q9H4F1 302 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 JMJD4Q9H9V9 463 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 SLAIN2Q9P270 581 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 ANKIB1Q9P2G1 1089 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 PACSIN2Q9UNF0 486 aaPredicted RBP5.53□□□□□ -1.52
CLINT1-202ENST00000518855 AGAP1Q9UPQ3 857 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 ARL2BPQ9Y2Y0 163 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 STARD13Q9Y3M8 1113 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 KLHL33A6NCF5 533 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 FSCN2O14926 492 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 PRPF4O43172 522 aaKnown RBP eCLIP5.53□□□□□ -1.52
CLINT1-202ENST00000518855 TGFB1I1O43294 461 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 SORBS3O60504 671 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 CTNND1O60716 968 aaKnown RBP5.53□□□□□ -1.52
CLINT1-202ENST00000518855 AKAP3O75969 853 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 NPTXRO95502 500 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 SHBGP04278 402 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 CYP1A2P05177 515 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 LDHBP07195 334 aaKnown RBP5.53□□□□□ -1.52
CLINT1-202ENST00000518855 PIM1P11309 404 aaPredicted RBP5.53□□□□□ -1.52
CLINT1-202ENST00000518855 SLC9A1P19634 815 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 NR2F2P24468 414 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 KLRK1P26718 216 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 USP46P62068 366 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 PTK6Q13882 451 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 CTTNQ14247 550 aaKnown RBP5.53□□□□□ -1.52
CLINT1-202ENST00000518855 MTFR1Q15390 333 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 CEP128Q6ZU80 1094 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 CPLX4Q7Z7G2 160 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 EXOC3L1Q86VI1 746 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 DDX42Q86XP3 938 aaKnown RBP eCLIP5.53□□□□□ -1.52
CLINT1-202ENST00000518855 KLHL7Q8IXQ5 586 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 EXOC8Q8IYI6 725 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 LRRC34Q8IZ02 419 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 CYP4X1Q8N118 509 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 SLC35G2Q8TBE7 412 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 IFT43Q96FT9 208 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 PSMB7Q99436 277 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 ERVK-5Q9HDB9 667 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 TUFT1Q9NNX1 390 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 CYLDQ9NQC7 956 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 SAMD15Q9P1V8 674 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 NARFQ9UHQ1 456 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 PNMA2Q9UL42 364 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 PPP1R9AQ9ULJ8 1098 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 ASB3Q9Y575 518 aa5.53□□□□□ -1.52
CLINT1-202ENST00000518855 PHF20L1A8MW92 1017 aa5.52□□□□□ -1.53
CLINT1-202ENST00000518855 ZBTB5O15062 677 aa5.52□□□□□ -1.53
CLINT1-202ENST00000518855 PLSCR1O15162 318 aa5.52□□□□□ -1.53
CLINT1-202ENST00000518855 AHCYL1O43865 530 aa5.52□□□□□ -1.53
CLINT1-202ENST00000518855 UNC5CO95185 931 aa5.52□□□□□ -1.53
CLINT1-202ENST00000518855 NR3C1P04150 777 aa5.52□□□□□ -1.53
CLINT1-202ENST00000518855 FDX1P10109 184 aa5.52□□□□□ -1.53
CLINT1-202ENST00000518855 IVDP26440 423 aa5.52□□□□□ -1.53
CLINT1-202ENST00000518855 SREBF1P36956 1147 aa5.52□□□□□ -1.53
CLINT1-202ENST00000518855 RPL21P46778 160 aaKnown RBP5.52□□□□□ -1.53
CLINT1-202ENST00000518855 NR1H3Q13133 447 aa5.52□□□□□ -1.53
CLINT1-202ENST00000518855 WASHC2DQ5SRD0 308 aa5.52□□□□□ -1.53
CLINT1-202ENST00000518855 CGB2Q6NT52 195 aa5.52□□□□□ -1.53
CLINT1-202ENST00000518855 UBLCP1Q8WVY7 318 aaPredicted RBP5.52□□□□□ -1.53
CLINT1-202ENST00000518855 PSPC1Q8WXF1 523 aaKnown RBP5.52□□□□□ -1.53
CLINT1-202ENST00000518855 CEP95Q96GE4 821 aa5.52□□□□□ -1.53
CLINT1-202ENST00000518855 IFT74Q96LB3 600 aa5.52□□□□□ -1.53
CLINT1-202ENST00000518855 TMEM260Q9NX78 707 aa5.52□□□□□ -1.53
CLINT1-202ENST00000518855 PCDHA12Q9UN75 941 aa5.52□□□□□ -1.53
CLINT1-202ENST00000518855 IGSF9BQ9UPX0 1349 aa5.52□□□□□ -1.53
CLINT1-202ENST00000518855 OPLAHO14841 1288 aa5.52□□□□□ -1.53
CLINT1-202ENST00000518855 SUN1O94901 812 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms