RNA–Protein interactions for RNA: ENST00000518542.1

CSGALNACT1-206, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-206ENST00000518542 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.43□□□□□ -1.06
CSGALNACT1-206ENST00000518542 HNRNPDLO14979 420 aaKnown RBP8.43□□□□□ -1.06
CSGALNACT1-206ENST00000518542 B4GALT5O43286 388 aa8.43□□□□□ -1.06
CSGALNACT1-206ENST00000518542 MGEA5O60502 916 aa8.43□□□□□ -1.06
CSGALNACT1-206ENST00000518542 EOMESO95936 686 aa8.43□□□□□ -1.06
CSGALNACT1-206ENST00000518542 MBD3O95983 291 aa8.43□□□□□ -1.06
CSGALNACT1-206ENST00000518542 RPN1P04843 607 aaKnown RBP8.43□□□□□ -1.06
CSGALNACT1-206ENST00000518542 ATP2A2P16615 1042 aaKnown RBP8.43□□□□□ -1.06
CSGALNACT1-206ENST00000518542 ARF4P18085 180 aaPredicted RBP8.43□□□□□ -1.06
CSGALNACT1-206ENST00000518542 HOXA11P31270 313 aaPredicted RBP8.43□□□□□ -1.06
CSGALNACT1-206ENST00000518542 SARSP49591 514 aaKnown RBP8.43□□□□□ -1.06
CSGALNACT1-206ENST00000518542 GTF2BQ00403 316 aa8.43□□□□□ -1.06
CSGALNACT1-206ENST00000518542 DPYDQ12882 1025 aa8.43□□□□□ -1.06
CSGALNACT1-206ENST00000518542 PNOCQ13519 176 aa8.43□□□□□ -1.06
CSGALNACT1-206ENST00000518542 DSC3Q14574 896 aa8.43□□□□□ -1.06
CSGALNACT1-206ENST00000518542 AMHR2Q16671 573 aa8.43□□□□□ -1.06
CSGALNACT1-206ENST00000518542 TCTN1Q2MV58 587 aa8.43□□□□□ -1.06
CSGALNACT1-206ENST00000518542 PROX2Q3B8N5 592 aa8.43□□□□□ -1.06
CSGALNACT1-206ENST00000518542 KMT5BQ4FZB7 885 aa8.43□□□□□ -1.06
CSGALNACT1-206ENST00000518542 ATF7IP2Q5U623 682 aa8.43□□□□□ -1.06
CSGALNACT1-206ENST00000518542 RASIP1Q5U651 963 aa8.43□□□□□ -1.06
CSGALNACT1-206ENST00000518542 SLC27A1Q6PCB7 646 aa8.43□□□□□ -1.06
CSGALNACT1-206ENST00000518542 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.43□□□□□ -1.06
CSGALNACT1-206ENST00000518542 RTN4RL1Q86UN2 441 aaPredicted RBP8.43□□□□□ -1.06
CSGALNACT1-206ENST00000518542 HACE1Q8IYU2 909 aa8.43□□□□□ -1.06
CSGALNACT1-206ENST00000518542 SYCP3Q8IZU3 236 aa8.43□□□□□ -1.06
CSGALNACT1-206ENST00000518542 KCNN1Q92952 543 aa8.43□□□□□ -1.06
CSGALNACT1-206ENST00000518542 SMARCE1Q969G3 411 aa8.43□□□□□ -1.06
CSGALNACT1-206ENST00000518542 PGBD4Q96DM1 585 aa8.43□□□□□ -1.06
CSGALNACT1-206ENST00000518542 GSDMAQ96QA5 445 aa8.43□□□□□ -1.06
CSGALNACT1-206ENST00000518542 ACCSQ96QU6 501 aa8.43□□□□□ -1.06
CSGALNACT1-206ENST00000518542 FIZ1Q96SL8 496 aa8.43□□□□□ -1.06
CSGALNACT1-206ENST00000518542 TCHPQ9BT92 498 aa8.43□□□□□ -1.06
CSGALNACT1-206ENST00000518542 ZBED2Q9BTP6 218 aa8.43□□□□□ -1.06
CSGALNACT1-206ENST00000518542 TRAIPQ9BWF2 469 aa8.43□□□□□ -1.06
CSGALNACT1-206ENST00000518542 GTPBP4Q9BZE4 634 aaKnown RBP8.43□□□□□ -1.06
CSGALNACT1-206ENST00000518542 RMND1Q9NWS8 449 aa8.43□□□□□ -1.06
CSGALNACT1-206ENST00000518542 CXXC1Q9P0U4 656 aaPredicted RBP8.43□□□□□ -1.06
CSGALNACT1-206ENST00000518542 TBX20Q9UMR3 447 aa8.43□□□□□ -1.06
CSGALNACT1-206ENST00000518542 PCDHB7Q9Y5E2 793 aa8.43□□□□□ -1.06
CSGALNACT1-206ENST00000518542 VCANP13611 3396 aa8.43□□□□□ -1.06
CSGALNACT1-206ENST00000518542 PTPRSQ13332 1948 aa8.42□□□□□ -1.06
CSGALNACT1-206ENST00000518542 A0A0U1RQF3 1178 aa8.42□□□□□ -1.06
CSGALNACT1-206ENST00000518542 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.42□□□□□ -1.06
CSGALNACT1-206ENST00000518542 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.42□□□□□ -1.06
CSGALNACT1-206ENST00000518542 GOLGA6L3A6NEY3 463 aa8.42□□□□□ -1.06
CSGALNACT1-206ENST00000518542 C9IYK1 514 aa8.42□□□□□ -1.06
CSGALNACT1-206ENST00000518542 EIF3DO15371 548 aaKnown RBP eCLIP8.42□□□□□ -1.06
CSGALNACT1-206ENST00000518542 HOXA2O43364 376 aa8.42□□□□□ -1.06
CSGALNACT1-206ENST00000518542 KLRC4O43908 158 aa8.42□□□□□ -1.06
CSGALNACT1-206ENST00000518542 TOM1L1O75674 476 aa8.42□□□□□ -1.06
CSGALNACT1-206ENST00000518542 RHOBTB3O94955 611 aa8.42□□□□□ -1.06
CSGALNACT1-206ENST00000518542 UPP2O95045 317 aa8.42□□□□□ -1.06
CSGALNACT1-206ENST00000518542 KIF20AO95235 890 aa8.42□□□□□ -1.06
CSGALNACT1-206ENST00000518542 IBSPP21815 317 aaPredicted RBP8.42□□□□□ -1.06
CSGALNACT1-206ENST00000518542 MATR3P43243 847 aaKnown RBP eCLIP8.42□□□□□ -1.06
CSGALNACT1-206ENST00000518542 LIG4P49917 911 aa8.42□□□□□ -1.06
CSGALNACT1-206ENST00000518542 FAM189BP81408 668 aa8.42□□□□□ -1.06
CSGALNACT1-206ENST00000518542 DEFB103AP81534 67 aa8.42□□□□□ -1.06
CSGALNACT1-206ENST00000518542 EHHADHQ08426 723 aa8.42□□□□□ -1.06
CSGALNACT1-206ENST00000518542 KCNB1Q14721 858 aa8.42□□□□□ -1.06
CSGALNACT1-206ENST00000518542 DCAF4L1Q3SXM0 396 aa8.42□□□□□ -1.06
CSGALNACT1-206ENST00000518542 ZC2HC1CQ53FD0 456 aaPredicted RBP8.42□□□□□ -1.06
CSGALNACT1-206ENST00000518542 NT5DC1Q5TFE4 455 aa8.42□□□□□ -1.06
CSGALNACT1-206ENST00000518542 ZPBP2Q6X784 338 aa8.42□□□□□ -1.06
CSGALNACT1-206ENST00000518542 TAS1R3Q7RTX0 852 aa8.42□□□□□ -1.06
CSGALNACT1-206ENST00000518542 ECHDC2Q86YB7 292 aa8.42□□□□□ -1.06
CSGALNACT1-206ENST00000518542 NPAS4Q8IUM7 802 aa8.42□□□□□ -1.06
CSGALNACT1-206ENST00000518542 MAP4K3Q8IVH8 894 aa8.42□□□□□ -1.06
CSGALNACT1-206ENST00000518542 LINC01599Q8WXQ3 324 aa8.42□□□□□ -1.06
CSGALNACT1-206ENST00000518542 TOP1MTQ969P6 601 aa8.42□□□□□ -1.06
CSGALNACT1-206ENST00000518542 ACO2Q99798 780 aaKnown RBP8.42□□□□□ -1.06
CSGALNACT1-206ENST00000518542 TARS2Q9BW92 718 aaKnown RBP8.42□□□□□ -1.06
CSGALNACT1-206ENST00000518542 PDZD7Q9H5P4 517 aa8.42□□□□□ -1.06
CSGALNACT1-206ENST00000518542 ELAC1Q9H777 363 aaKnown RBP8.42□□□□□ -1.06
CSGALNACT1-206ENST00000518542 TMEM206Q9H813 350 aa8.42□□□□□ -1.06
CSGALNACT1-206ENST00000518542 SLC39A2Q9NP94 309 aa8.42□□□□□ -1.06
CSGALNACT1-206ENST00000518542 FAM105AQ9NUU6 356 aa8.42□□□□□ -1.06
CSGALNACT1-206ENST00000518542 TMEM161AQ9NX61 479 aa8.42□□□□□ -1.06
CSGALNACT1-206ENST00000518542 TNFSF13BQ9Y275 285 aa8.42□□□□□ -1.06
CSGALNACT1-206ENST00000518542 GBF1Q92538 1859 aa8.42□□□□□ -1.06
CSGALNACT1-206ENST00000518542 TTC28Q96AY4 2481 aa8.42□□□□□ -1.06
CSGALNACT1-206ENST00000518542 UBE4BO95155 1302 aa8.41□□□□□ -1.06
CSGALNACT1-206ENST00000518542 CLDN3O15551 220 aa8.41□□□□□ -1.06
CSGALNACT1-206ENST00000518542 ZNF623O75123 536 aa8.41□□□□□ -1.06
CSGALNACT1-206ENST00000518542 PRPF6O94906 941 aaKnown RBP8.41□□□□□ -1.06
CSGALNACT1-206ENST00000518542 GJB5O95377 273 aa8.41□□□□□ -1.06
CSGALNACT1-206ENST00000518542 NPTXRO95502 500 aa8.41□□□□□ -1.06
CSGALNACT1-206ENST00000518542 PIGRP01833 764 aa8.41□□□□□ -1.06
CSGALNACT1-206ENST00000518542 MYBP10242 640 aa8.41□□□□□ -1.06
CSGALNACT1-206ENST00000518542 ITGA4P13612 1032 aa8.41□□□□□ -1.06
CSGALNACT1-206ENST00000518542 CASP5P51878 434 aa8.41□□□□□ -1.06
CSGALNACT1-206ENST00000518542 LSM11P83369 360 aaKnown RBP eCLIP8.41□□□□□ -1.06
CSGALNACT1-206ENST00000518542 CAMK4Q16566 473 aa8.41□□□□□ -1.06
CSGALNACT1-206ENST00000518542 ZNF568Q3ZCX4 644 aa8.41□□□□□ -1.06
CSGALNACT1-206ENST00000518542 FAM109BQ6ICB4 259 aaPredicted RBP8.41□□□□□ -1.06
CSGALNACT1-206ENST00000518542 SLFN12LQ6IEE8 588 aa8.41□□□□□ -1.06
CSGALNACT1-206ENST00000518542 FAM117BQ6P1L5 589 aa8.41□□□□□ -1.06
CSGALNACT1-206ENST00000518542 MPZL3Q6UWV2 235 aa8.41□□□□□ -1.06
CSGALNACT1-206ENST00000518542 CDR2LQ86X02 465 aaPredicted RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms