RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 KAT5Q92993 513 aa28.7■■■□□ 2.19
COL13A1-210ENST00000517713 AGPAT1Q99943 283 aa28.7■■■□□ 2.19
COL13A1-210ENST00000517713 UTP3Q9NQZ2 479 aaKnown RBP eCLIP28.7■■■□□ 2.19
COL13A1-210ENST00000517713 PDGFCQ9NRA1 345 aa28.7■■■□□ 2.19
COL13A1-210ENST00000517713 RAB20Q9NX57 234 aa28.7■■■□□ 2.19
COL13A1-210ENST00000517713 MCM3APO60318 1980 aa28.7■■■□□ 2.19
COL13A1-210ENST00000517713 ADCY3O60266 1144 aa28.7■■■□□ 2.18
COL13A1-210ENST00000517713 GALCP54803 685 aa28.7■■■□□ 2.18
COL13A1-210ENST00000517713 DRP2Q13474 957 aa28.7■■■□□ 2.18
COL13A1-210ENST00000517713 IER5Q5VY09 327 aa28.7■■■□□ 2.18
COL13A1-210ENST00000517713 ARMCX2Q7L311 632 aa28.7■■■□□ 2.18
COL13A1-210ENST00000517713 TAS1R2Q8TE23 839 aa28.7■■■□□ 2.18
COL13A1-210ENST00000517713 PRPF31Q8WWY3 499 aaKnown RBP28.7■■■□□ 2.18
COL13A1-210ENST00000517713 SEC31AO94979 1220 aaKnown RBP28.69■■■□□ 2.18
COL13A1-210ENST00000517713 EXOC8Q8IYI6 725 aa28.69■■■□□ 2.18
COL13A1-210ENST00000517713 SCFD2Q8WU76 684 aa28.69■■■□□ 2.18
COL13A1-210ENST00000517713 KREMEN1Q96MU8 473 aa28.69■■■□□ 2.18
COL13A1-210ENST00000517713 TARS2Q9BW92 718 aaKnown RBP28.69■■■□□ 2.18
COL13A1-210ENST00000517713 ARFGAP3Q9NP61 516 aa28.69■■■□□ 2.18
COL13A1-210ENST00000517713 TUBBP07437 444 aa28.69■■■□□ 2.18
COL13A1-210ENST00000517713 PSMD6Q15008 389 aa28.69■■■□□ 2.18
COL13A1-210ENST00000517713 PLCB4Q15147 1175 aa28.69■■■□□ 2.18
COL13A1-210ENST00000517713 TMEM63BQ5T3F8 832 aa28.69■■■□□ 2.18
COL13A1-210ENST00000517713 TCP11Q8WWU5 503 aa28.69■■■□□ 2.18
COL13A1-210ENST00000517713 ZBTB45Q96K62 511 aaPredicted RBP28.69■■■□□ 2.18
COL13A1-210ENST00000517713 NT5C1BQ96P26 610 aa28.69■■■□□ 2.18
COL13A1-210ENST00000517713 HAPLN2Q9GZV7 340 aa28.69■■■□□ 2.18
COL13A1-210ENST00000517713 SEPT11Q9NVA2 429 aaKnown RBP28.69■■■□□ 2.18
COL13A1-210ENST00000517713 SRCAPQ6ZRS2 3230 aa28.68■■■□□ 2.18
COL13A1-210ENST00000517713 TMCO5BA8MYB1 307 aa28.68■■■□□ 2.18
COL13A1-210ENST00000517713 GAS2O43903 313 aaKnown RBP28.68■■■□□ 2.18
COL13A1-210ENST00000517713 USP8P40818 1118 aa28.68■■■□□ 2.18
COL13A1-210ENST00000517713 NLRP11P59045 1033 aaKnown RBP28.68■■■□□ 2.18
COL13A1-210ENST00000517713 FKBP1BP68106 108 aa28.68■■■□□ 2.18
COL13A1-210ENST00000517713 ZNF792Q3KQV3 632 aa28.68■■■□□ 2.18
COL13A1-210ENST00000517713 CCDC181Q5TID7 509 aa28.68■■■□□ 2.18
COL13A1-210ENST00000517713 FAM71AQ8IYT1 594 aa28.68■■■□□ 2.18
COL13A1-210ENST00000517713 HELQQ8TDG4 1101 aa28.68■■■□□ 2.18
COL13A1-210ENST00000517713 BRI3BPQ8WY22 251 aa28.68■■■□□ 2.18
COL13A1-210ENST00000517713 SMARCAD1Q9H4L7 1026 aa28.68■■■□□ 2.18
COL13A1-210ENST00000517713 DIS3Q9Y2L1 958 aaKnown RBP28.68■■■□□ 2.18
COL13A1-210ENST00000517713 ZBTB42B2RXF5 422 aa28.67■■■□□ 2.18
COL13A1-210ENST00000517713 LDHAP00338 332 aaKnown RBP28.67■■■□□ 2.18
COL13A1-210ENST00000517713 CLDN10P78369 228 aa28.67■■■□□ 2.18
COL13A1-210ENST00000517713 ITIH3Q06033 890 aa28.67■■■□□ 2.18
COL13A1-210ENST00000517713 ANKRD23Q86SG2 305 aa28.67■■■□□ 2.18
COL13A1-210ENST00000517713 SLC20A1Q8WUM9 679 aa28.67■■■□□ 2.18
COL13A1-210ENST00000517713 SUGCTQ9HAC7 445 aa28.67■■■□□ 2.18
COL13A1-210ENST00000517713 GBA2Q9HCG7 927 aaPredicted RBP28.67■■■□□ 2.18
COL13A1-210ENST00000517713 TMEM253P0C7T8 217 aa28.67■■■□□ 2.18
COL13A1-210ENST00000517713 ADORA2AP29274 412 aa28.67■■■□□ 2.18
COL13A1-210ENST00000517713 PAFAH1B1P43034 410 aa28.67■■■□□ 2.18
COL13A1-210ENST00000517713 MATR3P43243 847 aaKnown RBP eCLIP28.67■■■□□ 2.18
COL13A1-210ENST00000517713 ACOT2P49753 483 aa28.67■■■□□ 2.18
COL13A1-210ENST00000517713 SLC26A2P50443 739 aa28.67■■■□□ 2.18
COL13A1-210ENST00000517713 C2orf54Q08AI8 447 aa28.67■■■□□ 2.18
COL13A1-210ENST00000517713 TPCN2Q8NHX9 752 aa28.67■■■□□ 2.18
COL13A1-210ENST00000517713 FNBP1Q96RU3 617 aa28.67■■■□□ 2.18
COL13A1-210ENST00000517713 EDN1P05305 212 aa28.66■■■□□ 2.18
COL13A1-210ENST00000517713 GCLCP48506 637 aaPredicted RBP28.66■■■□□ 2.18
COL13A1-210ENST00000517713 EFNA5P52803 228 aa28.66■■■□□ 2.18
COL13A1-210ENST00000517713 CRELD2Q6UXH1 353 aaPredicted RBP28.66■■■□□ 2.18
COL13A1-210ENST00000517713 C15orf39Q6ZRI6 1047 aa28.66■■■□□ 2.18
COL13A1-210ENST00000517713 LRRC57Q8N9N7 239 aa28.66■■■□□ 2.18
COL13A1-210ENST00000517713 LMBR1Q8WVP7 490 aa28.66■■■□□ 2.18
COL13A1-210ENST00000517713 HNRNPLLQ8WVV9 542 aaKnown RBP28.66■■■□□ 2.18
COL13A1-210ENST00000517713 SHC3Q92529 594 aa28.66■■■□□ 2.18
COL13A1-210ENST00000517713 ZNF516Q92618 1163 aa28.66■■■□□ 2.18
COL13A1-210ENST00000517713 MSTO1Q9BUK6 570 aa28.66■■■□□ 2.18
COL13A1-210ENST00000517713 ANKFY1Q9P2R3 1169 aa28.66■■■□□ 2.18
COL13A1-210ENST00000517713 A0A0B4J269 797 aa28.65■■■□□ 2.18
COL13A1-210ENST00000517713 IGKV6-21A0A0C4DH24 114 aa28.65■■■□□ 2.18
COL13A1-210ENST00000517713 MKRN4PQ13434 485 aaPredicted RBP28.65■■■□□ 2.18
COL13A1-210ENST00000517713 PRPF4BQ13523 1007 aaKnown RBP28.65■■■□□ 2.18
COL13A1-210ENST00000517713 FAM53CQ9NYF3 392 aa28.65■■■□□ 2.18
COL13A1-210ENST00000517713 RNF14Q9UBS8 474 aa28.65■■■□□ 2.18
COL13A1-210ENST00000517713 PACSIN2Q9UNF0 486 aaPredicted RBP28.65■■■□□ 2.18
COL13A1-210ENST00000517713 PLXNB2O15031 1838 aa28.65■■■□□ 2.18
COL13A1-210ENST00000517713 ATP8B1O43520 1251 aa28.65■■■□□ 2.18
COL13A1-210ENST00000517713 VSNL1P62760 191 aa28.65■■■□□ 2.18
COL13A1-210ENST00000517713 LAMTOR4Q0VGL1 99 aa28.65■■■□□ 2.18
COL13A1-210ENST00000517713 MXD4Q14582 209 aaPredicted RBP28.65■■■□□ 2.18
COL13A1-210ENST00000517713 CTNNBL1Q8WYA6 563 aaPredicted RBP28.65■■■□□ 2.18
COL13A1-210ENST00000517713 TAS2R14Q9NYV8 317 aa28.65■■■□□ 2.18
COL13A1-210ENST00000517713 MORF4L1Q9UBU8 362 aa28.65■■■□□ 2.18
COL13A1-210ENST00000517713 NCANO14594 1321 aa28.65■■■□□ 2.18
COL13A1-210ENST00000517713 SGPL1O95470 568 aa28.64■■■□□ 2.18
COL13A1-210ENST00000517713 TNNI1P19237 187 aa28.64■■■□□ 2.18
COL13A1-210ENST00000517713 CBX1P83916 185 aa28.64■■■□□ 2.18
COL13A1-210ENST00000517713 WDR93Q6P2C0 686 aa28.64■■■□□ 2.18
COL13A1-210ENST00000517713 PALB2Q86YC2 1186 aa28.64■■■□□ 2.18
COL13A1-210ENST00000517713 RPUSD2Q8IZ73 545 aaKnown RBP28.64■■■□□ 2.18
COL13A1-210ENST00000517713 ABRAQ8N0Z2 381 aa28.64■■■□□ 2.18
COL13A1-210ENST00000517713 LRRC71Q8N4P6 559 aa28.64■■■□□ 2.18
COL13A1-210ENST00000517713 SPATA4Q8NEY3 305 aa28.64■■■□□ 2.18
COL13A1-210ENST00000517713 JPH2Q9BR39 696 aaPredicted RBP28.64■■■□□ 2.18
COL13A1-210ENST00000517713 RNF216Q9NWF9 866 aaPredicted RBP28.64■■■□□ 2.18
COL13A1-210ENST00000517713 RBAKQ9NYW8 714 aaPredicted RBP28.64■■■□□ 2.18
COL13A1-210ENST00000517713 TRPC6Q9Y210 931 aa28.64■■■□□ 2.18
COL13A1-210ENST00000517713 STRNO43815 780 aa28.64■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms