RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 SERPINC1P01008 464 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 APOEP02649 317 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 CTSHP09668 335 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 NQO1P15559 274 aaKnown RBP5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 SDSP20132 328 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 SP100P23497 879 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 RGS2P41220 211 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 SKIV2L2P42285 1042 aaKnown RBP5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 TNNI2P48788 182 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 TMED10P49755 219 aaKnown RBP5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 RASSF2P50749 326 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 BLVRAP53004 296 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 GPSM2P81274 684 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 PTPN11Q06124 597 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 ADAM9Q13443 819 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 NFE2L2Q16236 605 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 NKPD1Q17RQ9 610 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 SYCP2LQ5T4T6 812 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 DAB2IPQ5VWQ8 1189 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 LRIG3Q6UXM1 1119 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 CYP26C1Q6V0L0 522 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 CCDC129Q6ZRS4 1044 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 Q6ZUG5 572 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 VSTM4Q8IW00 320 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 SPERTQ8NA61 448 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 RBBP8NLQ8NC74 664 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 SUN5Q8TC36 379 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 RUFY2Q8WXA3 655 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 CCT6BQ92526 530 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 CAVIN3Q969G5 261 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 SLF1Q9BQI6 1058 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 SDF4Q9BRK5 362 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 RIOK1Q9BRS2 568 aaKnown RBP5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 SIKE1Q9BRV8 207 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 SELENOOQ9BVL4 669 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 NUF2Q9BZD4 464 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 TM6SF1Q9BZW5 370 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 KRT23Q9C075 422 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 FTOQ9C0B1 505 aaKnown RBP eCLIP5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 RAB17Q9H0T7 212 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 PIH1D3Q9NQM4 214 aaKnown RBP5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 EURLQ9NYK6 297 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 IFNKQ9P0W0 207 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 SAMD15Q9P1V8 674 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 CFDP1Q9UEE9 299 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 MTMR6Q9Y217 621 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 TSC22D4Q9Y3Q8 395 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 SPO11Q9Y5K1 396 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 NRXN1Q9ULB1 1477 aa5.18□□□□□ -1.58
HMGB1P19-201ENST00000517578 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 ZNF503-AS2A6NEH8 195 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 AKR1B15C9JRZ8 316 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 GCOM1H8Y6P7 765 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 DNM1LO00429 736 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 TRAPPC3O43617 180 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 HNRNPCL1O60812 293 aaKnown RBP5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 PEX14O75381 377 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 LDHAP00338 332 aaKnown RBP5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 KRT6AP02538 564 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 KRT6BP04259 564 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 ASLP04424 464 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 PAEPP09466 180 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 PTPN2P17706 415 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 ENDOUP21128 410 aaKnown RBP5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 BDNFP23560 247 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 PSMA5P28066 241 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 PHBP35232 272 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 PDE6BP35913 854 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 EPS15P42566 896 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 BPIFB4P59827 614 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 FANCCQ00597 558 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 PDCLQ13371 301 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 MSLNQ13421 630 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 DCTN2Q13561 401 aaKnown RBP5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 ZCWPW2Q504Y3 356 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 SMUG1Q53HV7 270 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 COBLL1Q53SF7 1204 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 WASHC2DQ5SRD0 308 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 DEPDC1Q5TB30 811 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 MEX3CQ5U5Q3 659 aaKnown RBP5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 IL23RQ5VWK5 629 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 ANO7Q6IWH7 933 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 OLFM4Q6UX06 510 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 NEK10Q6ZWH5 1172 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 TAOK1Q7L7X3 1001 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 DAAM2Q86T65 1068 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 TTC6Q86TZ1 520 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 VPS36Q86VN1 386 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 TTC30AQ86WT1 665 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 ZSWIM9Q86XI8 627 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 TMTC1Q8IUR5 882 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 LURAP1LQ8IV03 231 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 SCUBE1Q8IWY4 988 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 SLC7A5P1Q8MH63 180 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 TMEM57Q8N5G2 664 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 ESX1Q8N693 406 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 AOPEPQ8N6M6 819 aa5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 ENAHQ8N8S7 591 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P19-201ENST00000517578 ENOX1Q8TC92 643 aaKnown RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms