RNA–Protein interactions for RNA: ENST00000516884.1

SNORA40.15-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 107 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.15-201ENST00000516884 TBKBP1A7MCY6 615 aa3.3□□□□□ -1.88
SNORA40.15-201ENST00000516884 TMEM127O75204 238 aa3.3□□□□□ -1.88
SNORA40.15-201ENST00000516884 SPDEFO95238 335 aa3.3□□□□□ -1.88
SNORA40.15-201ENST00000516884 CFIP05156 583 aa3.3□□□□□ -1.88
SNORA40.15-201ENST00000516884 LTA4HP09960 611 aaKnown RBP3.3□□□□□ -1.88
SNORA40.15-201ENST00000516884 RBP3P10745 1247 aa3.3□□□□□ -1.88
SNORA40.15-201ENST00000516884 CDK4P11802 303 aa3.3□□□□□ -1.88
SNORA40.15-201ENST00000516884 HSP90B1P14625 803 aaKnown RBP3.3□□□□□ -1.88
SNORA40.15-201ENST00000516884 ITGB6P18564 788 aa3.3□□□□□ -1.88
SNORA40.15-201ENST00000516884 MGAT1P26572 445 aa3.3□□□□□ -1.88
SNORA40.15-201ENST00000516884 RBM25P49756 843 aaKnown RBP3.3□□□□□ -1.88
SNORA40.15-201ENST00000516884 ELLP55199 621 aaPredicted RBP3.3□□□□□ -1.88
SNORA40.15-201ENST00000516884 FOXF2Q12947 444 aa3.3□□□□□ -1.88
SNORA40.15-201ENST00000516884 TP53BP2Q13625 1128 aa3.3□□□□□ -1.88
SNORA40.15-201ENST00000516884 BMT2Q1RMZ1 405 aa3.3□□□□□ -1.88
SNORA40.15-201ENST00000516884 ZNF362Q5T0B9 420 aaPredicted RBP3.3□□□□□ -1.88
SNORA40.15-201ENST00000516884 AGAP9Q5VTM2 703 aa3.3□□□□□ -1.88
SNORA40.15-201ENST00000516884 ANKS6Q68DC2 871 aa3.3□□□□□ -1.88
SNORA40.15-201ENST00000516884 GLB1L2Q8IW92 636 aa3.3□□□□□ -1.88
SNORA40.15-201ENST00000516884 CMTR2Q8IYT2 770 aaKnown RBP3.3□□□□□ -1.88
SNORA40.15-201ENST00000516884 ZNF610Q8N9Z0 462 aa3.3□□□□□ -1.88
SNORA40.15-201ENST00000516884 MTFR1LQ9H019 292 aa3.3□□□□□ -1.88
SNORA40.15-201ENST00000516884 EPC1Q9H2F5 836 aa3.3□□□□□ -1.88
SNORA40.15-201ENST00000516884 TMEM260Q9NX78 707 aa3.3□□□□□ -1.88
SNORA40.15-201ENST00000516884 EVLQ9UI08 416 aaPredicted RBP3.3□□□□□ -1.88
SNORA40.15-201ENST00000516884 MSRAQ9UJ68 235 aa3.3□□□□□ -1.88
SNORA40.15-201ENST00000516884 HDAC5Q9UQL6 1122 aa3.3□□□□□ -1.88
SNORA40.15-201ENST00000516884 COL11A2P13942 1736 aaPredicted RBP3.3□□□□□ -1.88
SNORA40.15-201ENST00000516884 COL3A1P02461 1466 aaPredicted RBP3.29□□□□□ -1.88
SNORA40.15-201ENST00000516884 ZMYM3Q14202 1370 aa3.29□□□□□ -1.88
SNORA40.15-201ENST00000516884 SPATA31A6Q5VVP1 1343 aa3.29□□□□□ -1.88
SNORA40.15-201ENST00000516884 ST20-MTHFSA0A0A6YYL1 179 aa3.29□□□□□ -1.88
SNORA40.15-201ENST00000516884 PRSS38A1L453 326 aa3.29□□□□□ -1.88
SNORA40.15-201ENST00000516884 PPP1R12AO14974 1030 aaPredicted RBP3.29□□□□□ -1.88
SNORA40.15-201ENST00000516884 C1QL1O75973 258 aa3.29□□□□□ -1.88
SNORA40.15-201ENST00000516884 CXCR5P32302 372 aa3.29□□□□□ -1.88
SNORA40.15-201ENST00000516884 NRG3P56975 720 aa3.29□□□□□ -1.88
SNORA40.15-201ENST00000516884 APBA1Q02410 837 aa3.29□□□□□ -1.88
SNORA40.15-201ENST00000516884 MGAT5Q09328 741 aa3.29□□□□□ -1.88
SNORA40.15-201ENST00000516884 PABPC4Q13310 644 aaKnown RBP eCLIP3.29□□□□□ -1.88
SNORA40.15-201ENST00000516884 BOLLQ8N9W6 283 aaKnown RBP3.29□□□□□ -1.88
SNORA40.15-201ENST00000516884 PRSS50Q9UI38 385 aa3.29□□□□□ -1.88
SNORA40.15-201ENST00000516884 PPP2R3BQ9Y5P8 575 aa3.29□□□□□ -1.88
SNORA40.15-201ENST00000516884 FPGT-TNNI3KV9GXZ4 949 aa3.29□□□□□ -1.88
SNORA40.15-201ENST00000516884 UNC119BA6NIH7 251 aa3.28□□□□□ -1.88
SNORA40.15-201ENST00000516884 ZNF891A8MT65 544 aaPredicted RBP3.28□□□□□ -1.88
SNORA40.15-201ENST00000516884 C1RP00736 705 aa3.28□□□□□ -1.88
SNORA40.15-201ENST00000516884 GASTP01350 101 aa3.28□□□□□ -1.88
SNORA40.15-201ENST00000516884 HLA-DOAP06340 250 aa3.28□□□□□ -1.88
SNORA40.15-201ENST00000516884 SPATA31D3P0C874 917 aa3.28□□□□□ -1.88
SNORA40.15-201ENST00000516884 PTH2RP49190 550 aa3.28□□□□□ -1.88
SNORA40.15-201ENST00000516884 MANFP55145 182 aaKnown RBP3.28□□□□□ -1.88
SNORA40.15-201ENST00000516884 MPP3Q13368 585 aa3.28□□□□□ -1.88
SNORA40.15-201ENST00000516884 TERF2Q15554 542 aa3.28□□□□□ -1.88
SNORA40.15-201ENST00000516884 DDB1Q16531 1140 aa3.28□□□□□ -1.88
SNORA40.15-201ENST00000516884 ERCC6LQ2NKX8 1250 aa3.28□□□□□ -1.88
SNORA40.15-201ENST00000516884 LMBR1LQ6UX01 489 aa3.28□□□□□ -1.88
SNORA40.15-201ENST00000516884 SPATA31D4Q6ZUB0 917 aa3.28□□□□□ -1.88
SNORA40.15-201ENST00000516884 SYNPOQ8N3V7 929 aa3.28□□□□□ -1.88
SNORA40.15-201ENST00000516884 SMC1BQ8NDV3 1235 aa3.28□□□□□ -1.88
SNORA40.15-201ENST00000516884 SNX33Q8WV41 574 aa3.28□□□□□ -1.88
SNORA40.15-201ENST00000516884 CHTF18Q8WVB6 975 aa3.28□□□□□ -1.88
SNORA40.15-201ENST00000516884 CAVIN3Q969G5 261 aa3.28□□□□□ -1.88
SNORA40.15-201ENST00000516884 FERMT2Q96AC1 680 aa3.28□□□□□ -1.88
SNORA40.15-201ENST00000516884 CEP95Q96GE4 821 aa3.28□□□□□ -1.88
SNORA40.15-201ENST00000516884 OSBPL2Q9H1P3 480 aa3.28□□□□□ -1.88
SNORA40.15-201ENST00000516884 KANSL2Q9H9L4 492 aa3.28□□□□□ -1.88
SNORA40.15-201ENST00000516884 SPON1Q9HCB6 807 aa3.28□□□□□ -1.88
SNORA40.15-201ENST00000516884 USP18Q9UMW8 372 aa3.28□□□□□ -1.88
SNORA40.15-201ENST00000516884 CDK11AQ9UQ88 783 aaPredicted RBP3.28□□□□□ -1.88
SNORA40.15-201ENST00000516884 ZKSCAN5Q9Y2L8 839 aa3.28□□□□□ -1.88
SNORA40.15-201ENST00000516884 SALL3Q9BXA9 1300 aa3.27□□□□□ -1.89
SNORA40.15-201ENST00000516884 E9PSI1 815 aa3.27□□□□□ -1.89
SNORA40.15-201ENST00000516884 PJA2O43164 708 aa3.27□□□□□ -1.89
SNORA40.15-201ENST00000516884 GAS7O60861 476 aa3.27□□□□□ -1.89
SNORA40.15-201ENST00000516884 RBMXL2O75526 392 aaKnown RBP3.27□□□□□ -1.89
SNORA40.15-201ENST00000516884 ITGA10O75578 1167 aa3.27□□□□□ -1.89
SNORA40.15-201ENST00000516884 ELANEP08246 267 aa3.27□□□□□ -1.89
SNORA40.15-201ENST00000516884 XPAP23025 273 aaPredicted RBP3.27□□□□□ -1.89
SNORA40.15-201ENST00000516884 CRHR1P34998 444 aa3.27□□□□□ -1.89
SNORA40.15-201ENST00000516884 FLT3LGP49771 235 aa3.27□□□□□ -1.89
SNORA40.15-201ENST00000516884 PPARAQ07869 468 aa3.27□□□□□ -1.89
SNORA40.15-201ENST00000516884 TRIM25Q14258 630 aaKnown RBP3.27□□□□□ -1.89
SNORA40.15-201ENST00000516884 ZNF169Q14929 603 aaPredicted RBP3.27□□□□□ -1.89
SNORA40.15-201ENST00000516884 MFSD14BQ5SR56 506 aa3.27□□□□□ -1.89
SNORA40.15-201ENST00000516884 EFCAB12Q6NXP0 572 aa3.27□□□□□ -1.89
SNORA40.15-201ENST00000516884 ABHD15Q6UXT9 468 aa3.27□□□□□ -1.89
SNORA40.15-201ENST00000516884 C1QL2Q7Z5L3 287 aa3.27□□□□□ -1.89
SNORA40.15-201ENST00000516884 PASD1Q8IV76 773 aa3.27□□□□□ -1.89
SNORA40.15-201ENST00000516884 RHOT2Q8IXI1 618 aa3.27□□□□□ -1.89
SNORA40.15-201ENST00000516884 SRRM1Q8IYB3 904 aaKnown RBP3.27□□□□□ -1.89
SNORA40.15-201ENST00000516884 TFAP2CQ92754 450 aa3.27□□□□□ -1.89
SNORA40.15-201ENST00000516884 CDC5LQ99459 802 aaKnown RBP3.27□□□□□ -1.89
SNORA40.15-201ENST00000516884 PRDM12Q9H4Q4 367 aa3.27□□□□□ -1.89
SNORA40.15-201ENST00000516884 SEMA4GQ9NTN9 838 aa3.27□□□□□ -1.89
SNORA40.15-201ENST00000516884 TMEM74BQ9NUR3 256 aa3.27□□□□□ -1.89
SNORA40.15-201ENST00000516884 IFT57Q9NWB7 429 aa3.27□□□□□ -1.89
SNORA40.15-201ENST00000516884 GPRC5DQ9NZD1 345 aa3.27□□□□□ -1.89
SNORA40.15-201ENST00000516884 LCHNA4D1U4 455 aa3.26□□□□□ -1.89
SNORA40.15-201ENST00000516884 CDKL5O76039 1030 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms