RNA–Protein interactions for RNA: ENST00000516133.1

SCARNA16.1-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.1-201ENST00000516133 MLH1P40692 756 aa12.32□□□□□ -0.44
SCARNA16.1-201ENST00000516133 NRIP1P48552 1158 aa12.32□□□□□ -0.44
SCARNA16.1-201ENST00000516133 SLC11A1P49279 550 aa12.32□□□□□ -0.44
SCARNA16.1-201ENST00000516133 KCNQ1P51787 676 aa12.32□□□□□ -0.44
SCARNA16.1-201ENST00000516133 RAD51AP2Q09MP3 1159 aa12.32□□□□□ -0.44
SCARNA16.1-201ENST00000516133 STRN3Q13033 797 aa12.32□□□□□ -0.44
SCARNA16.1-201ENST00000516133 GIT2Q14161 759 aa12.32□□□□□ -0.44
SCARNA16.1-201ENST00000516133 DHX8Q14562 1220 aaKnown RBP12.32□□□□□ -0.44
SCARNA16.1-201ENST00000516133 STK38Q15208 465 aa12.32□□□□□ -0.44
SCARNA16.1-201ENST00000516133 NT5DC1Q5TFE4 455 aa12.32□□□□□ -0.44
SCARNA16.1-201ENST00000516133 RRAGBQ5VZM2 374 aa12.32□□□□□ -0.44
SCARNA16.1-201ENST00000516133 ATL3Q6DD88 541 aa12.32□□□□□ -0.44
SCARNA16.1-201ENST00000516133 DDX53Q86TM3 631 aaKnown RBP12.32□□□□□ -0.44
SCARNA16.1-201ENST00000516133 RBM23Q86U06 439 aaKnown RBP12.32□□□□□ -0.44
SCARNA16.1-201ENST00000516133 GPBP1Q86WP2 473 aa12.32□□□□□ -0.44
SCARNA16.1-201ENST00000516133 LINC00301Q8NCQ3 95 aa12.32□□□□□ -0.44
SCARNA16.1-201ENST00000516133 ADAMTS19Q8TE59 1207 aa12.32□□□□□ -0.44
SCARNA16.1-201ENST00000516133 ZFP42Q96MM3 310 aa12.32□□□□□ -0.44
SCARNA16.1-201ENST00000516133 TFIP11Q9UBB9 837 aaKnown RBP12.32□□□□□ -0.44
SCARNA16.1-201ENST00000516133 DNAJB4Q9UDY4 337 aa12.32□□□□□ -0.44
SCARNA16.1-201ENST00000516133 STK17AQ9UEE5 414 aa12.32□□□□□ -0.44
SCARNA16.1-201ENST00000516133 FAM50BQ9Y247 325 aa12.32□□□□□ -0.44
SCARNA16.1-201ENST00000516133 NRP1O14786 923 aa12.31□□□□□ -0.44
SCARNA16.1-201ENST00000516133 SPTLC2O15270 562 aa12.31□□□□□ -0.44
SCARNA16.1-201ENST00000516133 PPP6R2O75170 966 aa12.31□□□□□ -0.44
SCARNA16.1-201ENST00000516133 CXCL14O95715 111 aa12.31□□□□□ -0.44
SCARNA16.1-201ENST00000516133 ABCD1P33897 745 aa12.31□□□□□ -0.44
SCARNA16.1-201ENST00000516133 LTBRP36941 435 aa12.31□□□□□ -0.44
SCARNA16.1-201ENST00000516133 SCNN1GP51170 649 aa12.31□□□□□ -0.44
SCARNA16.1-201ENST00000516133 DSC1Q08554 894 aa12.31□□□□□ -0.44
SCARNA16.1-201ENST00000516133 MCM6Q14566 821 aa12.31□□□□□ -0.44
SCARNA16.1-201ENST00000516133 SMC1AQ14683 1233 aaKnown RBP12.31□□□□□ -0.44
SCARNA16.1-201ENST00000516133 SPECC1Q5M775 1068 aa12.31□□□□□ -0.44
SCARNA16.1-201ENST00000516133 CCDC73Q6ZRK6 1079 aa12.31□□□□□ -0.44
SCARNA16.1-201ENST00000516133 USP49Q70CQ1 688 aa12.31□□□□□ -0.44
SCARNA16.1-201ENST00000516133 ADGRD2Q7Z7M1 963 aa12.31□□□□□ -0.44
SCARNA16.1-201ENST00000516133 COLGALT2Q8IYK4 626 aa12.31□□□□□ -0.44
SCARNA16.1-201ENST00000516133 VPS52Q8N1B4 723 aa12.31□□□□□ -0.44
SCARNA16.1-201ENST00000516133 TMEM161BQ8NDZ6 487 aa12.31□□□□□ -0.44
SCARNA16.1-201ENST00000516133 GSTCDQ8NEC7 633 aa12.31□□□□□ -0.44
SCARNA16.1-201ENST00000516133 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.31□□□□□ -0.44
SCARNA16.1-201ENST00000516133 LARP4BQ92615 738 aaKnown RBP12.31□□□□□ -0.44
SCARNA16.1-201ENST00000516133 KCNN1Q92952 543 aa12.31□□□□□ -0.44
SCARNA16.1-201ENST00000516133 CLIC6Q96NY7 704 aa12.31□□□□□ -0.44
SCARNA16.1-201ENST00000516133 RPS6KC1Q96S38 1066 aa12.31□□□□□ -0.44
SCARNA16.1-201ENST00000516133 UHRF1Q96T88 793 aaPredicted RBP12.31□□□□□ -0.44
SCARNA16.1-201ENST00000516133 ACO2Q99798 780 aaKnown RBP12.31□□□□□ -0.44
SCARNA16.1-201ENST00000516133 TCHPQ9BT92 498 aa12.31□□□□□ -0.44
SCARNA16.1-201ENST00000516133 COLEC11Q9BWP8 271 aa12.31□□□□□ -0.44
SCARNA16.1-201ENST00000516133 PARVGQ9HBI0 331 aa12.31□□□□□ -0.44
SCARNA16.1-201ENST00000516133 KLK14Q9P0G3 267 aa12.31□□□□□ -0.44
SCARNA16.1-201ENST00000516133 CFAP45Q9UL16 551 aa12.31□□□□□ -0.44
SCARNA16.1-201ENST00000516133 USP20Q9Y2K6 914 aa12.31□□□□□ -0.44
SCARNA16.1-201ENST00000516133 KIAA1671Q9BY89 1806 aa12.31□□□□□ -0.44
SCARNA16.1-201ENST00000516133 NPHP3-ACAD11A0A0J9YXS1 232 aa12.3□□□□□ -0.44
SCARNA16.1-201ENST00000516133 GRXCR2A6NFK2 248 aa12.3□□□□□ -0.44
SCARNA16.1-201ENST00000516133 H3BQ06 376 aaPredicted RBP12.3□□□□□ -0.44
SCARNA16.1-201ENST00000516133 PER2O15055 1255 aa12.3□□□□□ -0.44
SCARNA16.1-201ENST00000516133 FAM13AO94988 1023 aa12.3□□□□□ -0.44
SCARNA16.1-201ENST00000516133 YEATS4O95619 227 aa12.3□□□□□ -0.44
SCARNA16.1-201ENST00000516133 F13A1P00488 732 aa12.3□□□□□ -0.44
SCARNA16.1-201ENST00000516133 SRGAP2BP0DMP2 458 aa12.3□□□□□ -0.44
SCARNA16.1-201ENST00000516133 MAPTP10636 758 aaKnown RBP12.3□□□□□ -0.44
SCARNA16.1-201ENST00000516133 GTF2F1P35269 517 aaKnown RBP eCLIP12.3□□□□□ -0.44
SCARNA16.1-201ENST00000516133 OR1G1P47890 313 aa12.3□□□□□ -0.44
SCARNA16.1-201ENST00000516133 NDUFV1P49821 464 aa12.3□□□□□ -0.44
SCARNA16.1-201ENST00000516133 ZNF131P52739 623 aa12.3□□□□□ -0.44
SCARNA16.1-201ENST00000516133 GRIK3Q13003 919 aa12.3□□□□□ -0.44
SCARNA16.1-201ENST00000516133 DUSP6Q16828 381 aa12.3□□□□□ -0.44
SCARNA16.1-201ENST00000516133 FOXD4L5Q5VV16 416 aaPredicted RBP12.3□□□□□ -0.44
SCARNA16.1-201ENST00000516133 PLPP4Q5VZY2 271 aa12.3□□□□□ -0.44
SCARNA16.1-201ENST00000516133 EEF1DP3Q658K8 133 aa12.3□□□□□ -0.44
SCARNA16.1-201ENST00000516133 PTCRAQ6ISU1 281 aaPredicted RBP12.3□□□□□ -0.44
SCARNA16.1-201ENST00000516133 ZPBP2Q6X784 338 aa12.3□□□□□ -0.44
SCARNA16.1-201ENST00000516133 SV2BQ7L1I2 683 aa12.3□□□□□ -0.44
SCARNA16.1-201ENST00000516133 TMEM173Q86WV6 379 aaPredicted RBP12.3□□□□□ -0.44
SCARNA16.1-201ENST00000516133 MYCT1Q8N699 235 aa12.3□□□□□ -0.44
SCARNA16.1-201ENST00000516133 TMEM87AQ8NBN3 555 aa12.3□□□□□ -0.44
SCARNA16.1-201ENST00000516133 SPRYD3Q8NCJ5 442 aa12.3□□□□□ -0.44
SCARNA16.1-201ENST00000516133 FOXD4L4Q8WXT5 416 aaPredicted RBP12.3□□□□□ -0.44
SCARNA16.1-201ENST00000516133 REEP2Q9BRK0 252 aa12.3□□□□□ -0.44
SCARNA16.1-201ENST00000516133 TARS2Q9BW92 718 aaKnown RBP12.3□□□□□ -0.44
SCARNA16.1-201ENST00000516133 PTPRHQ9HD43 1115 aa12.3□□□□□ -0.44
SCARNA16.1-201ENST00000516133 MIOSQ9NXC5 875 aa12.3□□□□□ -0.44
SCARNA16.1-201ENST00000516133 SNTG2Q9NY99 539 aa12.3□□□□□ -0.44
SCARNA16.1-201ENST00000516133 PCDHGC5Q9Y5F6 944 aa12.3□□□□□ -0.44
SCARNA16.1-201ENST00000516133 IRAK3Q9Y616 596 aa12.3□□□□□ -0.44
SCARNA16.1-201ENST00000516133 C2orf71A6NGG8 1288 aa12.29□□□□□ -0.44
SCARNA16.1-201ENST00000516133 HIDE1A8MVS5 230 aa12.29□□□□□ -0.44
SCARNA16.1-201ENST00000516133 LINC01565O15544 149 aa12.29□□□□□ -0.44
SCARNA16.1-201ENST00000516133 TRAK2O60296 914 aa12.29□□□□□ -0.44
SCARNA16.1-201ENST00000516133 B4GALT3O60512 393 aa12.29□□□□□ -0.44
SCARNA16.1-201ENST00000516133 TBCAO75347 108 aaKnown RBP12.29□□□□□ -0.44
SCARNA16.1-201ENST00000516133 TOM1L1O75674 476 aa12.29□□□□□ -0.44
SCARNA16.1-201ENST00000516133 RECQL4O94761 1208 aa12.29□□□□□ -0.44
SCARNA16.1-201ENST00000516133 EDN1P05305 212 aa12.29□□□□□ -0.44
SCARNA16.1-201ENST00000516133 THP07101 528 aa12.29□□□□□ -0.44
SCARNA16.1-201ENST00000516133 CTSAP10619 480 aa12.29□□□□□ -0.44
SCARNA16.1-201ENST00000516133 MCF2P10911 925 aa12.29□□□□□ -0.44
SCARNA16.1-201ENST00000516133 YARSP54577 528 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms