RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 DLATP10515 647 aaKnown RBP16.72■□□□□ 0.27
THUMPD3-210ENST00000515662 EFNA5P52803 228 aa16.72■□□□□ 0.27
THUMPD3-210ENST00000515662 MXD4Q14582 209 aaPredicted RBP16.72■□□□□ 0.27
THUMPD3-210ENST00000515662 TEX35Q5T0J7 233 aa16.72■□□□□ 0.27
THUMPD3-210ENST00000515662 DPP9Q86TI2 863 aa16.72■□□□□ 0.27
THUMPD3-210ENST00000515662 LRRC71Q8N4P6 559 aa16.72■□□□□ 0.27
THUMPD3-210ENST00000515662 LNX1Q8TBB1 728 aaPredicted RBP16.72■□□□□ 0.27
THUMPD3-210ENST00000515662 NMRK2Q9NPI5 230 aa16.72■□□□□ 0.27
THUMPD3-210ENST00000515662 ATP8B3O60423 1300 aa16.72■□□□□ 0.27
THUMPD3-210ENST00000515662 A0A0B4J269 797 aa16.72■□□□□ 0.27
THUMPD3-210ENST00000515662 ITGBL1O95965 494 aaPredicted RBP16.72■□□□□ 0.27
THUMPD3-210ENST00000515662 GPC3P51654 580 aa16.72■□□□□ 0.27
THUMPD3-210ENST00000515662 NLRP11P59045 1033 aaKnown RBP16.72■□□□□ 0.27
THUMPD3-210ENST00000515662 CLDN10P78369 228 aa16.72■□□□□ 0.27
THUMPD3-210ENST00000515662 PSMD6Q15008 389 aa16.72■□□□□ 0.27
THUMPD3-210ENST00000515662 CDCA2Q69YH5 1023 aaPredicted RBP16.72■□□□□ 0.27
THUMPD3-210ENST00000515662 CRELD2Q6UXH1 353 aaPredicted RBP16.72■□□□□ 0.27
THUMPD3-210ENST00000515662 SV2AQ7L0J3 742 aa16.72■□□□□ 0.27
THUMPD3-210ENST00000515662 PLEKHH3Q7Z736 793 aa16.72■□□□□ 0.27
THUMPD3-210ENST00000515662 TAS1R2Q8TE23 839 aa16.72■□□□□ 0.27
THUMPD3-210ENST00000515662 TRAPPC12Q8WVT3 735 aa16.72■□□□□ 0.27
THUMPD3-210ENST00000515662 EMID1Q96A84 441 aaPredicted RBP16.72■□□□□ 0.27
THUMPD3-210ENST00000515662 JPH2Q9BR39 696 aaPredicted RBP16.72■□□□□ 0.27
THUMPD3-210ENST00000515662 CCDC113Q9H0I3 377 aa16.72■□□□□ 0.27
THUMPD3-210ENST00000515662 ERAP1Q9NZ08 941 aa16.72■□□□□ 0.27
THUMPD3-210ENST00000515662 SRGAP2O75044 1071 aa16.71■□□□□ 0.27
THUMPD3-210ENST00000515662 MAPK4P31152 587 aa16.71■□□□□ 0.27
THUMPD3-210ENST00000515662 HUNKP57058 714 aa16.71■□□□□ 0.27
THUMPD3-210ENST00000515662 FBXL13Q8NEE6 735 aa16.71■□□□□ 0.27
THUMPD3-210ENST00000515662 RABGGTAQ92696 567 aa16.71■□□□□ 0.27
THUMPD3-210ENST00000515662 KAT5Q92993 513 aa16.71■□□□□ 0.27
THUMPD3-210ENST00000515662 MAML3Q96JK9 1138 aa16.71■□□□□ 0.27
THUMPD3-210ENST00000515662 RNPEPQ9H4A4 650 aa16.71■□□□□ 0.27
THUMPD3-210ENST00000515662 SNX12Q9UMY4 172 aa16.71■□□□□ 0.27
THUMPD3-210ENST00000515662 SRGAP2CP0DJJ0 459 aa16.71■□□□□ 0.26
THUMPD3-210ENST00000515662 ADCYAP1R1P41586 468 aa16.71■□□□□ 0.26
THUMPD3-210ENST00000515662 ACOT2P49753 483 aa16.71■□□□□ 0.26
THUMPD3-210ENST00000515662 NAP1L1P55209 391 aaKnown RBP16.71■□□□□ 0.26
THUMPD3-210ENST00000515662 ZPBP2Q6X784 338 aa16.71■□□□□ 0.26
THUMPD3-210ENST00000515662 GLYCTKQ8IVS8 523 aa16.71■□□□□ 0.26
THUMPD3-210ENST00000515662 PPTC7Q8NI37 304 aa16.71■□□□□ 0.26
THUMPD3-210ENST00000515662 U2AF1L4Q8WU68 220 aaKnown RBP16.71■□□□□ 0.26
THUMPD3-210ENST00000515662 MSTO1Q9BUK6 570 aa16.71■□□□□ 0.26
THUMPD3-210ENST00000515662 RAB20Q9NX57 234 aa16.71■□□□□ 0.26
THUMPD3-210ENST00000515662 ANKFY1Q9P2R3 1169 aa16.71■□□□□ 0.26
THUMPD3-210ENST00000515662 SUCLA2Q9P2R7 463 aaPredicted RBP16.71■□□□□ 0.26
THUMPD3-210ENST00000515662 ADGRA2Q96PE1 1338 aa16.71■□□□□ 0.26
THUMPD3-210ENST00000515662 CTAGE15A4D2H0 777 aa16.7■□□□□ 0.26
THUMPD3-210ENST00000515662 MSCO60682 206 aa16.7■□□□□ 0.26
THUMPD3-210ENST00000515662 LGALS2P05162 132 aa16.7■□□□□ 0.26
THUMPD3-210ENST00000515662 CTAGE8P0CG41 777 aa16.7■□□□□ 0.26
THUMPD3-210ENST00000515662 H2AFXP16104 143 aaPredicted RBP16.7■□□□□ 0.26
THUMPD3-210ENST00000515662 C15orf39Q6ZRI6 1047 aa16.7■□□□□ 0.26
THUMPD3-210ENST00000515662 CTAGE6Q86UF2 777 aa16.7■□□□□ 0.26
THUMPD3-210ENST00000515662 DNAAF5Q86Y56 855 aa16.7■□□□□ 0.26
THUMPD3-210ENST00000515662 CTAGE4Q8IX94 777 aa16.7■□□□□ 0.26
THUMPD3-210ENST00000515662 RNF149Q8NC42 400 aa16.7■□□□□ 0.26
THUMPD3-210ENST00000515662 ZNF516Q92618 1163 aa16.7■□□□□ 0.26
THUMPD3-210ENST00000515662 KREMEN1Q96MU8 473 aa16.7■□□□□ 0.26
THUMPD3-210ENST00000515662 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.7■□□□□ 0.26
THUMPD3-210ENST00000515662 OGFRQ9NZT2 677 aa16.7■□□□□ 0.26
THUMPD3-210ENST00000515662 TTLL13PA6NNM8 815 aa16.7■□□□□ 0.26
THUMPD3-210ENST00000515662 LDHAP00338 332 aaKnown RBP16.7■□□□□ 0.26
THUMPD3-210ENST00000515662 MATR3P43243 847 aaKnown RBP eCLIP16.7■□□□□ 0.26
THUMPD3-210ENST00000515662 WNT7BP56706 349 aa16.7■□□□□ 0.26
THUMPD3-210ENST00000515662 ZBTB41Q5SVQ8 909 aa16.7■□□□□ 0.26
THUMPD3-210ENST00000515662 PPM1KQ8N3J5 372 aa16.7■□□□□ 0.26
THUMPD3-210ENST00000515662 GPR161Q8N6U8 529 aaKnown RBP16.7■□□□□ 0.26
THUMPD3-210ENST00000515662 HELQQ8TDG4 1101 aa16.7■□□□□ 0.26
THUMPD3-210ENST00000515662 AFG1LQ8WV93 481 aa16.7■□□□□ 0.26
THUMPD3-210ENST00000515662 EPC1Q9H2F5 836 aa16.7■□□□□ 0.26
THUMPD3-210ENST00000515662 INTUQ9ULD6 942 aa16.7■□□□□ 0.26
THUMPD3-210ENST00000515662 PCDHGC5Q9Y5F6 944 aa16.7■□□□□ 0.26
THUMPD3-210ENST00000515662 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.69■□□□□ 0.26
THUMPD3-210ENST00000515662 SLC15A5A6NIM6 579 aa16.69■□□□□ 0.26
THUMPD3-210ENST00000515662 H2AFZP0C0S5 128 aa16.69■□□□□ 0.26
THUMPD3-210ENST00000515662 PRLRP16471 622 aa16.69■□□□□ 0.26
THUMPD3-210ENST00000515662 MFAP3P55082 362 aa16.69■□□□□ 0.26
THUMPD3-210ENST00000515662 H2AFVQ71UI9 128 aa16.69■□□□□ 0.26
THUMPD3-210ENST00000515662 RHPN2Q8IUC4 686 aa16.69■□□□□ 0.26
THUMPD3-210ENST00000515662 ZBTB8OSQ8IWT0 167 aa16.69■□□□□ 0.26
THUMPD3-210ENST00000515662 NT5C1BQ96P26 610 aa16.69■□□□□ 0.26
THUMPD3-210ENST00000515662 MRPL4Q9BYD3 311 aaKnown RBP16.69■□□□□ 0.26
THUMPD3-210ENST00000515662 RBAKQ9NYW8 714 aaPredicted RBP16.69■□□□□ 0.26
THUMPD3-210ENST00000515662 PALMO75781 387 aa16.69■□□□□ 0.26
THUMPD3-210ENST00000515662 C22orf31O95567 290 aa16.69■□□□□ 0.26
THUMPD3-210ENST00000515662 TUBB4BP68371 445 aa16.69■□□□□ 0.26
THUMPD3-210ENST00000515662 PRPF4BQ13523 1007 aaKnown RBP16.69■□□□□ 0.26
THUMPD3-210ENST00000515662 ZNF484Q5JVG2 852 aa16.69■□□□□ 0.26
THUMPD3-210ENST00000515662 EFCAB12Q6NXP0 572 aa16.69■□□□□ 0.26
THUMPD3-210ENST00000515662 RASAL3Q86YV0 1011 aa16.69■□□□□ 0.26
THUMPD3-210ENST00000515662 FAM71AQ8IYT1 594 aa16.69■□□□□ 0.26
THUMPD3-210ENST00000515662 SHC3Q92529 594 aa16.69■□□□□ 0.26
THUMPD3-210ENST00000515662 ZBTB10Q96DT7 871 aa16.69■□□□□ 0.26
THUMPD3-210ENST00000515662 FAM84AQ96KN4 292 aa16.69■□□□□ 0.26
THUMPD3-210ENST00000515662 FNBP1Q96RU3 617 aa16.69■□□□□ 0.26
THUMPD3-210ENST00000515662 TINF2Q9BSI4 451 aa16.69■□□□□ 0.26
THUMPD3-210ENST00000515662 C2orf40Q9H1Z8 148 aa16.69■□□□□ 0.26
THUMPD3-210ENST00000515662 PDE11AQ9HCR9 933 aa16.69■□□□□ 0.26
THUMPD3-210ENST00000515662 CPA4Q9UI42 421 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms