RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 CDR2LQ86X02 465 aaPredicted RBP19.32■□□□□ 0.68
DDX41-217ENST00000515562 BSNDQ8WZ55 320 aa19.32■□□□□ 0.68
DDX41-217ENST00000515562 KIFAP3Q92845 792 aa19.32■□□□□ 0.68
DDX41-217ENST00000515562 IFT74Q96LB3 600 aa19.32■□□□□ 0.68
DDX41-217ENST00000515562 RPS6KC1Q96S38 1066 aa19.32■□□□□ 0.68
DDX41-217ENST00000515562 SFXN1Q9H9B4 322 aa19.32■□□□□ 0.68
DDX41-217ENST00000515562 KIAA1024Q9UPX6 916 aa19.32■□□□□ 0.68
DDX41-217ENST00000515562 PRKCBP05771 671 aa19.31■□□□□ 0.68
DDX41-217ENST00000515562 KLRC2P26717 231 aa19.31■□□□□ 0.68
DDX41-217ENST00000515562 MCM2P49736 904 aa19.31■□□□□ 0.68
DDX41-217ENST00000515562 RILPL1Q5EBL4 403 aa19.31■□□□□ 0.68
DDX41-217ENST00000515562 RARS2Q5T160 578 aaKnown RBP19.31■□□□□ 0.68
DDX41-217ENST00000515562 KRT79Q5XKE5 535 aa19.31■□□□□ 0.68
DDX41-217ENST00000515562 KIAA1841Q6NSI8 718 aa19.31■□□□□ 0.68
DDX41-217ENST00000515562 RNF168Q8IYW5 571 aaPredicted RBP19.31■□□□□ 0.68
DDX41-217ENST00000515562 GSTCDQ8NEC7 633 aa19.31■□□□□ 0.68
DDX41-217ENST00000515562 TMX3Q96JJ7 454 aa19.31■□□□□ 0.68
DDX41-217ENST00000515562 ADPGKQ9BRR6 497 aa19.31■□□□□ 0.68
DDX41-217ENST00000515562 COLEC11Q9BWP8 271 aa19.31■□□□□ 0.68
DDX41-217ENST00000515562 CCDC113Q9H0I3 377 aa19.31■□□□□ 0.68
DDX41-217ENST00000515562 POMKQ9H5K3 350 aa19.31■□□□□ 0.68
DDX41-217ENST00000515562 PDZD7Q9H5P4 517 aa19.31■□□□□ 0.68
DDX41-217ENST00000515562 DDX19AQ9NUU7 478 aaKnown RBP19.31■□□□□ 0.68
DDX41-217ENST00000515562 PARP2Q9UGN5 583 aa19.31■□□□□ 0.68
DDX41-217ENST00000515562 SPDYE4A6NLX3 237 aa19.3■□□□□ 0.68
DDX41-217ENST00000515562 ACKR2O00590 384 aa19.3■□□□□ 0.68
DDX41-217ENST00000515562 LILRB3O75022 631 aa19.3■□□□□ 0.68
DDX41-217ENST00000515562 ADH1AP07327 375 aa19.3■□□□□ 0.68
DDX41-217ENST00000515562 CNPP09543 421 aaKnown RBP19.3■□□□□ 0.68
DDX41-217ENST00000515562 GLUD2P49448 558 aa19.3■□□□□ 0.68
DDX41-217ENST00000515562 CLCN4P51793 760 aa19.3■□□□□ 0.68
DDX41-217ENST00000515562 EFNA5P52803 228 aa19.3■□□□□ 0.68
DDX41-217ENST00000515562 ZXDAP98168 799 aa19.3■□□□□ 0.68
DDX41-217ENST00000515562 ECM1Q16610 540 aa19.3■□□□□ 0.68
DDX41-217ENST00000515562 MCTP1Q6DN14 999 aa19.3■□□□□ 0.68
DDX41-217ENST00000515562 HFE2Q6ZVN8 426 aa19.3■□□□□ 0.68
DDX41-217ENST00000515562 MFSD14AQ96MC6 490 aa19.3■□□□□ 0.68
DDX41-217ENST00000515562 FBXL18Q96ME1 805 aa19.3■□□□□ 0.68
DDX41-217ENST00000515562 KLHL5Q96PQ7 755 aa19.3■□□□□ 0.68
DDX41-217ENST00000515562 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.3■□□□□ 0.68
DDX41-217ENST00000515562 TSHZ2Q9NRE2 1034 aa19.3■□□□□ 0.68
DDX41-217ENST00000515562 MIOSQ9NXC5 875 aa19.3■□□□□ 0.68
DDX41-217ENST00000515562 EFEMP2O95967 443 aa19.29■□□□□ 0.68
DDX41-217ENST00000515562 PTPN21Q16825 1174 aa19.29■□□□□ 0.68
DDX41-217ENST00000515562 ATAT1Q5SQI0 421 aa19.29■□□□□ 0.68
DDX41-217ENST00000515562 ELMSAN1Q6PJG2 1045 aa19.29■□□□□ 0.68
DDX41-217ENST00000515562 DTHD1Q6ZMT9 781 aa19.29■□□□□ 0.68
DDX41-217ENST00000515562 TRIM67Q6ZTA4 783 aa19.29■□□□□ 0.68
DDX41-217ENST00000515562 KLK14Q9P0G3 267 aa19.29■□□□□ 0.68
DDX41-217ENST00000515562 DPP7Q9UHL4 492 aa19.29■□□□□ 0.68
DDX41-217ENST00000515562 CDH22Q9UJ99 828 aa19.29■□□□□ 0.68
DDX41-217ENST00000515562 DNM3Q9UQ16 869 aa19.29■□□□□ 0.68
DDX41-217ENST00000515562 H3BQV1 296 aa19.28■□□□□ 0.68
DDX41-217ENST00000515562 C2CD2LO14523 706 aa19.28■□□□□ 0.68
DDX41-217ENST00000515562 LIG1P18858 919 aa19.28■□□□□ 0.68
DDX41-217ENST00000515562 SP100P23497 879 aaPredicted RBP19.28■□□□□ 0.68
DDX41-217ENST00000515562 DSG1Q02413 1049 aa19.28■□□□□ 0.68
DDX41-217ENST00000515562 DCAF4L1Q3SXM0 396 aa19.28■□□□□ 0.68
DDX41-217ENST00000515562 APBB1IPQ7Z5R6 666 aaPredicted RBP19.28■□□□□ 0.68
DDX41-217ENST00000515562 BMP8AQ7Z5Y6 402 aa19.28■□□□□ 0.68
DDX41-217ENST00000515562 ZBTB33Q86T24 672 aa19.28■□□□□ 0.68
DDX41-217ENST00000515562 C12orf76Q8N812 135 aaPredicted RBP19.28■□□□□ 0.68
DDX41-217ENST00000515562 TDRD5Q8NAT2 981 aaKnown RBP19.28■□□□□ 0.68
DDX41-217ENST00000515562 KIFC3Q9BVG8 833 aa19.28■□□□□ 0.68
DDX41-217ENST00000515562 KCNH6Q9H252 994 aa19.28■□□□□ 0.68
DDX41-217ENST00000515562 ADAM28Q9UKQ2 775 aa19.28■□□□□ 0.68
DDX41-217ENST00000515562 DENND4AQ7Z401 1863 aa19.28■□□□□ 0.68
DDX41-217ENST00000515562 TECTAO75443 2155 aa19.27■□□□□ 0.68
DDX41-217ENST00000515562 PHLPP2Q6ZVD8 1323 aa19.27■□□□□ 0.68
DDX41-217ENST00000515562 TMEM221A6NGB7 291 aa19.27■□□□□ 0.68
DDX41-217ENST00000515562 TTLL13PA6NNM8 815 aa19.27■□□□□ 0.68
DDX41-217ENST00000515562 M0R296 226 aa19.27■□□□□ 0.68
DDX41-217ENST00000515562 GJB2P29033 226 aa19.27■□□□□ 0.68
DDX41-217ENST00000515562 ATP2C1P98194 919 aaPredicted RBP19.27■□□□□ 0.68
DDX41-217ENST00000515562 SIGLEC14Q08ET2 396 aa19.27■□□□□ 0.68
DDX41-217ENST00000515562 TUSC3Q13454 348 aa19.27■□□□□ 0.68
DDX41-217ENST00000515562 FUT10Q6P4F1 479 aa19.27■□□□□ 0.68
DDX41-217ENST00000515562 GPR65Q8IYL9 337 aa19.27■□□□□ 0.68
DDX41-217ENST00000515562 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.27■□□□□ 0.68
DDX41-217ENST00000515562 CHST7Q9NS84 486 aa19.27■□□□□ 0.68
DDX41-217ENST00000515562 USTQ9Y2C2 406 aa19.27■□□□□ 0.68
DDX41-217ENST00000515562 SF3B1O75533 1304 aaKnown RBP eCLIP19.26■□□□□ 0.67
DDX41-217ENST00000515562 PP2D1A8MPX8 630 aa19.26■□□□□ 0.67
DDX41-217ENST00000515562 C2CD4DB7Z1M9 353 aa19.26■□□□□ 0.67
DDX41-217ENST00000515562 F8W810 466 aa19.26■□□□□ 0.67
DDX41-217ENST00000515562 TEX28O15482 410 aa19.26■□□□□ 0.67
DDX41-217ENST00000515562 RECQL4O94761 1208 aa19.26■□□□□ 0.67
DDX41-217ENST00000515562 CD2BP2O95400 341 aaKnown RBP19.26■□□□□ 0.67
DDX41-217ENST00000515562 GLUD1P00367 558 aa19.26■□□□□ 0.67
DDX41-217ENST00000515562 WEE2P0C1S8 567 aa19.26■□□□□ 0.67
DDX41-217ENST00000515562 CREMQ03060 361 aa19.26■□□□□ 0.67
DDX41-217ENST00000515562 DMP1Q13316 513 aaPredicted RBP19.26■□□□□ 0.67
DDX41-217ENST00000515562 HSP90AA2PQ14568 343 aaPredicted RBP19.26■□□□□ 0.67
DDX41-217ENST00000515562 USP41Q3LFD5 358 aa19.26■□□□□ 0.67
DDX41-217ENST00000515562 KIAA0319Q5VV43 1072 aa19.26■□□□□ 0.67
DDX41-217ENST00000515562 TMC5Q6UXY8 1006 aa19.26■□□□□ 0.67
DDX41-217ENST00000515562 C15orf39Q6ZRI6 1047 aa19.26■□□□□ 0.67
DDX41-217ENST00000515562 TAS1R1Q7RTX1 841 aa19.26■□□□□ 0.67
DDX41-217ENST00000515562 GPR149Q86SP6 731 aa19.26■□□□□ 0.67
DDX41-217ENST00000515562 KCTD17Q8N5Z5 321 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms