RNA–Protein interactions for RNA: ENST00000515499.5

TRIM41-208, Transcript of tripartite motif containing 41, humanhuman

TSL 3

Gene TRIM41, Length 914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-208ENST00000515499 ZNF507Q8TCN5 953 aa22.8■■□□□ 1.24
TRIM41-208ENST00000515499 LRCH3Q96II8 777 aa22.8■■□□□ 1.24
TRIM41-208ENST00000515499 CDT1Q9H211 546 aa22.8■■□□□ 1.24
TRIM41-208ENST00000515499 NXF3Q9H4D5 531 aaKnown RBP22.8■■□□□ 1.24
TRIM41-208ENST00000515499 TMEM206Q9H813 350 aa22.8■■□□□ 1.24
TRIM41-208ENST00000515499 SLC28A3Q9HAS3 691 aa22.8■■□□□ 1.24
TRIM41-208ENST00000515499 HES2Q9Y543 173 aa22.8■■□□□ 1.24
TRIM41-208ENST00000515499 COL4A6Q14031 1691 aa22.8■■□□□ 1.24
TRIM41-208ENST00000515499 TBKBP1A7MCY6 615 aa22.79■■□□□ 1.24
TRIM41-208ENST00000515499 MEIS3P2A8K0S8 358 aa22.79■■□□□ 1.24
TRIM41-208ENST00000515499 PRPF6O94906 941 aaKnown RBP22.79■■□□□ 1.24
TRIM41-208ENST00000515499 RHOBTB3O94955 611 aa22.79■■□□□ 1.24
TRIM41-208ENST00000515499 GATMP50440 423 aa22.79■■□□□ 1.24
TRIM41-208ENST00000515499 MCL1Q07820 350 aa22.79■■□□□ 1.24
TRIM41-208ENST00000515499 BTG3Q14201 252 aaPredicted RBP22.79■■□□□ 1.24
TRIM41-208ENST00000515499 GLB1LQ6UWU2 654 aa22.79■■□□□ 1.24
TRIM41-208ENST00000515499 GLIS3Q8NEA6 775 aa22.79■■□□□ 1.24
TRIM41-208ENST00000515499 ZBTB45Q96K62 511 aaPredicted RBP22.79■■□□□ 1.24
TRIM41-208ENST00000515499 CASD1Q96PB1 797 aa22.79■■□□□ 1.24
TRIM41-208ENST00000515499 RNF39Q9H2S5 420 aa22.79■■□□□ 1.24
TRIM41-208ENST00000515499 RSAD1Q9HA92 442 aa22.79■■□□□ 1.24
TRIM41-208ENST00000515499 SLC39A2Q9NP94 309 aa22.79■■□□□ 1.24
TRIM41-208ENST00000515499 GIT1Q9Y2X7 761 aa22.79■■□□□ 1.24
TRIM41-208ENST00000515499 TMEM265A0A087WTH1 108 aa22.78■■□□□ 1.24
TRIM41-208ENST00000515499 OFD1O75665 1012 aa22.78■■□□□ 1.24
TRIM41-208ENST00000515499 SMC2O95347 1197 aa22.78■■□□□ 1.24
TRIM41-208ENST00000515499 KCNA1Q09470 495 aa22.78■■□□□ 1.24
TRIM41-208ENST00000515499 STK4Q13043 487 aa22.78■■□□□ 1.24
TRIM41-208ENST00000515499 NOLC1Q14978 699 aaKnown RBP eCLIP22.78■■□□□ 1.24
TRIM41-208ENST00000515499 SLFN12LQ6IEE8 588 aa22.78■■□□□ 1.24
TRIM41-208ENST00000515499 ZBTB33Q86T24 672 aa22.78■■□□□ 1.24
TRIM41-208ENST00000515499 SYCP3Q8IZU3 236 aa22.78■■□□□ 1.24
TRIM41-208ENST00000515499 FIBCD1Q8N539 461 aa22.78■■□□□ 1.24
TRIM41-208ENST00000515499 SPATA20Q8TB22 786 aa22.78■■□□□ 1.24
TRIM41-208ENST00000515499 HELQQ8TDG4 1101 aa22.78■■□□□ 1.24
TRIM41-208ENST00000515499 APOL6Q9BWW8 343 aa22.78■■□□□ 1.24
TRIM41-208ENST00000515499 ANKFY1Q9P2R3 1169 aa22.78■■□□□ 1.24
TRIM41-208ENST00000515499 STYXL1Q9Y6J8 313 aa22.78■■□□□ 1.24
TRIM41-208ENST00000515499 UBE4BO95155 1302 aa22.78■■□□□ 1.24
TRIM41-208ENST00000515499 FNDC1Q4ZHG4 1894 aaPredicted RBP22.77■■□□□ 1.24
TRIM41-208ENST00000515499 LINC01553A4QN01 128 aa22.77■■□□□ 1.24
TRIM41-208ENST00000515499 ANKRD63C9JTQ0 380 aa22.77■■□□□ 1.24
TRIM41-208ENST00000515499 GRM5P41594 1212 aa22.77■■□□□ 1.24
TRIM41-208ENST00000515499 MATR3P43243 847 aaKnown RBP eCLIP22.77■■□□□ 1.24
TRIM41-208ENST00000515499 FXR1P51114 621 aaKnown RBP eCLIP22.77■■□□□ 1.24
TRIM41-208ENST00000515499 PAN2Q504Q3 1202 aaKnown RBP22.77■■□□□ 1.24
TRIM41-208ENST00000515499 PPP2R2DQ66LE6 453 aa22.77■■□□□ 1.24
TRIM41-208ENST00000515499 SLC39A4Q6P5W5 647 aa22.77■■□□□ 1.24
TRIM41-208ENST00000515499 SCFD1Q8WVM8 642 aa22.77■■□□□ 1.24
TRIM41-208ENST00000515499 GSDMAQ96QA5 445 aa22.77■■□□□ 1.24
TRIM41-208ENST00000515499 RMND1Q9NWS8 449 aa22.77■■□□□ 1.24
TRIM41-208ENST00000515499 SNTG2Q9NY99 539 aa22.77■■□□□ 1.24
TRIM41-208ENST00000515499 PCDHA5Q9Y5H7 936 aa22.77■■□□□ 1.24
TRIM41-208ENST00000515499 ZMYM2Q9UBW7 1377 aa22.76■■□□□ 1.23
TRIM41-208ENST00000515499 A0A0B4J269 797 aa22.76■■□□□ 1.23
TRIM41-208ENST00000515499 AKAP5P24588 427 aa22.76■■□□□ 1.23
TRIM41-208ENST00000515499 HOXD13P35453 343 aa22.76■■□□□ 1.23
TRIM41-208ENST00000515499 TAP1Q03518 808 aa22.76■■□□□ 1.23
TRIM41-208ENST00000515499 BMT2Q1RMZ1 405 aa22.76■■□□□ 1.23
TRIM41-208ENST00000515499 NOMO2Q5JPE7 1267 aa22.76■■□□□ 1.23
TRIM41-208ENST00000515499 SMARCE1Q969G3 411 aa22.76■■□□□ 1.23
TRIM41-208ENST00000515499 CCDC94Q9BW85 323 aaPredicted RBP22.76■■□□□ 1.23
TRIM41-208ENST00000515499 MRPL9Q9BYD2 267 aaKnown RBP22.76■■□□□ 1.23
TRIM41-208ENST00000515499 HAPLN2Q9GZV7 340 aa22.76■■□□□ 1.23
TRIM41-208ENST00000515499 KANSL3Q9P2N6 904 aa22.76■■□□□ 1.23
TRIM41-208ENST00000515499 PARP2Q9UGN5 583 aa22.76■■□□□ 1.23
TRIM41-208ENST00000515499 INPPL1O15357 1258 aa22.75■■□□□ 1.23
TRIM41-208ENST00000515499 ARHGEF15O94989 841 aa22.75■■□□□ 1.23
TRIM41-208ENST00000515499 KYAT1Q16773 422 aa22.75■■□□□ 1.23
TRIM41-208ENST00000515499 LRRC43Q8N309 656 aa22.75■■□□□ 1.23
TRIM41-208ENST00000515499 KIAA0895Q8NCT3 520 aa22.75■■□□□ 1.23
TRIM41-208ENST00000515499 URGCPQ8TCY9 931 aa22.75■■□□□ 1.23
TRIM41-208ENST00000515499 CLP1Q92989 425 aaKnown RBP22.75■■□□□ 1.23
TRIM41-208ENST00000515499 MRPL42Q9Y6G3 142 aaKnown RBP22.75■■□□□ 1.23
TRIM41-208ENST00000515499 ARL5CA6NH57 179 aa22.74■■□□□ 1.23
TRIM41-208ENST00000515499 HARSP12081 509 aaKnown RBP22.74■■□□□ 1.23
TRIM41-208ENST00000515499 THNSL1Q8IYQ7 743 aa22.74■■□□□ 1.23
TRIM41-208ENST00000515499 CEP120Q8N960 986 aa22.74■■□□□ 1.23
TRIM41-208ENST00000515499 SAMD11Q96NU1 681 aa22.74■■□□□ 1.23
TRIM41-208ENST00000515499 ACAP3Q96P50 834 aa22.74■■□□□ 1.23
TRIM41-208ENST00000515499 TGS1Q96RS0 853 aaKnown RBP22.74■■□□□ 1.23
TRIM41-208ENST00000515499 GAD1Q99259 594 aa22.74■■□□□ 1.23
TRIM41-208ENST00000515499 MSTO1Q9BUK6 570 aa22.74■■□□□ 1.23
TRIM41-208ENST00000515499 GTPBP4Q9BZE4 634 aaKnown RBP22.74■■□□□ 1.23
TRIM41-208ENST00000515499 GBP3Q9H0R5 595 aa22.74■■□□□ 1.23
TRIM41-208ENST00000515499 IKZF4Q9H2S9 585 aa22.74■■□□□ 1.23
TRIM41-208ENST00000515499 ZNF576Q9H609 170 aa22.74■■□□□ 1.23
TRIM41-208ENST00000515499 TYW1Q9NV66 732 aaKnown RBP22.74■■□□□ 1.23
TRIM41-208ENST00000515499 INPP5FQ9Y2H2 1132 aa22.74■■□□□ 1.23
TRIM41-208ENST00000515499 GDAQ9Y2T3 454 aa22.74■■□□□ 1.23
TRIM41-208ENST00000515499 TISP43B9A030 160 aa22.73■■□□□ 1.23
TRIM41-208ENST00000515499 OGTO15294 1046 aa22.73■■□□□ 1.23
TRIM41-208ENST00000515499 RECQL4O94761 1208 aa22.73■■□□□ 1.23
TRIM41-208ENST00000515499 KIF20AO95235 890 aa22.73■■□□□ 1.23
TRIM41-208ENST00000515499 GARTP22102 1010 aa22.73■■□□□ 1.23
TRIM41-208ENST00000515499 ADSSP30520 456 aa22.73■■□□□ 1.23
TRIM41-208ENST00000515499 MLH1P40692 756 aa22.73■■□□□ 1.23
TRIM41-208ENST00000515499 YARSP54577 528 aaKnown RBP22.73■■□□□ 1.23
TRIM41-208ENST00000515499 ERVK-21P61565 698 aa22.73■■□□□ 1.23
TRIM41-208ENST00000515499 SNRPFP62306 86 aaKnown RBP22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms