RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 SLC35G2Q8TBE7 412 aa6.69□□□□□ -1.34
HMGCS1-207ENST00000514610 MVB12AQ96EY5 273 aa6.69□□□□□ -1.34
HMGCS1-207ENST00000514610 LMF1Q96S06 567 aa6.69□□□□□ -1.34
HMGCS1-207ENST00000514610 ADAM7Q9H2U9 754 aa6.69□□□□□ -1.34
HMGCS1-207ENST00000514610 LDAHQ9H6V9 325 aa6.69□□□□□ -1.34
HMGCS1-207ENST00000514610 SEC61A2Q9H9S3 476 aa6.69□□□□□ -1.34
HMGCS1-207ENST00000514610 IL23AQ9NPF7 189 aa6.69□□□□□ -1.34
HMGCS1-207ENST00000514610 NCDNQ9UBB6 729 aa6.69□□□□□ -1.34
HMGCS1-207ENST00000514610 PCDHB1Q9Y5F3 818 aa6.69□□□□□ -1.34
HMGCS1-207ENST00000514610 PMS2P1A4D2B8 440 aa6.68□□□□□ -1.34
HMGCS1-207ENST00000514610 VSTM5A8MXK1 200 aa6.68□□□□□ -1.34
HMGCS1-207ENST00000514610 LAMTOR5O43504 91 aa6.68□□□□□ -1.34
HMGCS1-207ENST00000514610 ENDOD1O94919 500 aa6.68□□□□□ -1.34
HMGCS1-207ENST00000514610 AMY1AP04745 511 aa6.68□□□□□ -1.34
HMGCS1-207ENST00000514610 GYPEP15421 78 aa6.68□□□□□ -1.34
HMGCS1-207ENST00000514610 CR2P20023 1033 aa6.68□□□□□ -1.34
HMGCS1-207ENST00000514610 CRHR1P34998 444 aa6.68□□□□□ -1.34
HMGCS1-207ENST00000514610 TARDBPQ13148 414 aaKnown RBP eCLIP6.68□□□□□ -1.34
HMGCS1-207ENST00000514610 MINDY4Q4G0A6 757 aa6.68□□□□□ -1.34
HMGCS1-207ENST00000514610 PRAMEF14Q5SWL7 426 aa6.68□□□□□ -1.34
HMGCS1-207ENST00000514610 FAM180AQ6UWF9 173 aa6.68□□□□□ -1.34
HMGCS1-207ENST00000514610 MIGA2Q7L4E1 593 aa6.68□□□□□ -1.34
HMGCS1-207ENST00000514610 GRAMD1CQ8IYS0 662 aa6.68□□□□□ -1.34
HMGCS1-207ENST00000514610 PQLC1Q8N2U9 271 aa6.68□□□□□ -1.34
HMGCS1-207ENST00000514610 ZGPATQ8N5A5 531 aaKnown RBP6.68□□□□□ -1.34
HMGCS1-207ENST00000514610 DIS3LQ8TF46 1054 aaKnown RBP6.68□□□□□ -1.34
HMGCS1-207ENST00000514610 GNRHR2Q96P88 292 aa6.68□□□□□ -1.34
HMGCS1-207ENST00000514610 DMRTA2Q96SC8 542 aa6.68□□□□□ -1.34
HMGCS1-207ENST00000514610 C12orf65Q9H3J6 166 aaKnown RBP6.68□□□□□ -1.34
HMGCS1-207ENST00000514610 PPP4R1LQ9P1A2 415 aa6.68□□□□□ -1.34
HMGCS1-207ENST00000514610 DDX20Q9UHI6 824 aaKnown RBP6.68□□□□□ -1.34
HMGCS1-207ENST00000514610 UBE2QL1A1L167 161 aa6.67□□□□□ -1.34
HMGCS1-207ENST00000514610 PRICKLE3O43900 615 aaPredicted RBP6.67□□□□□ -1.34
HMGCS1-207ENST00000514610 CDC14BO60729 498 aa6.67□□□□□ -1.34
HMGCS1-207ENST00000514610 STC2O76061 302 aa6.67□□□□□ -1.34
HMGCS1-207ENST00000514610 U2AF1L5P0DN76 240 aaPredicted RBP6.67□□□□□ -1.34
HMGCS1-207ENST00000514610 MYBP10242 640 aa6.67□□□□□ -1.34
HMGCS1-207ENST00000514610 GUCY1A2P33402 732 aa6.67□□□□□ -1.34
HMGCS1-207ENST00000514610 U2AF1Q01081 240 aaKnown RBP eCLIP6.67□□□□□ -1.34
HMGCS1-207ENST00000514610 MDM1Q8TC05 714 aa6.67□□□□□ -1.34
HMGCS1-207ENST00000514610 NSUN6Q8TEA1 469 aaKnown RBP6.67□□□□□ -1.34
HMGCS1-207ENST00000514610 UHRF1Q96T88 793 aaPredicted RBP6.67□□□□□ -1.34
HMGCS1-207ENST00000514610 MAP3K14Q99558 947 aa6.67□□□□□ -1.34
HMGCS1-207ENST00000514610 ACO2Q99798 780 aaKnown RBP6.67□□□□□ -1.34
HMGCS1-207ENST00000514610 ZCCHC4Q9H5U6 513 aa6.67□□□□□ -1.34
HMGCS1-207ENST00000514610 OBP2AQ9NY56 170 aa6.67□□□□□ -1.34
HMGCS1-207ENST00000514610 ZMYM3Q14202 1370 aa6.67□□□□□ -1.34
HMGCS1-207ENST00000514610 NRP1O14786 923 aa6.66□□□□□ -1.34
HMGCS1-207ENST00000514610 DTNBO60941 627 aa6.66□□□□□ -1.34
HMGCS1-207ENST00000514610 GASTP01350 101 aa6.66□□□□□ -1.34
HMGCS1-207ENST00000514610 SYN1P17600 705 aa6.66□□□□□ -1.34
HMGCS1-207ENST00000514610 FPR1P21462 350 aa6.66□□□□□ -1.34
HMGCS1-207ENST00000514610 PCSK1P29120 753 aa6.66□□□□□ -1.34
HMGCS1-207ENST00000514610 SURF1Q15526 300 aa6.66□□□□□ -1.34
HMGCS1-207ENST00000514610 FAM214AQ32MH5 1076 aa6.66□□□□□ -1.34
HMGCS1-207ENST00000514610 PGS1Q32NB8 556 aa6.66□□□□□ -1.34
HMGCS1-207ENST00000514610 GFOD2Q3B7J2 385 aa6.66□□□□□ -1.34
HMGCS1-207ENST00000514610 TBC1D10BQ4KMP7 808 aaPredicted RBP6.66□□□□□ -1.34
HMGCS1-207ENST00000514610 MFSD14BQ5SR56 506 aa6.66□□□□□ -1.34
HMGCS1-207ENST00000514610 GJC2Q5T442 439 aaPredicted RBP6.66□□□□□ -1.34
HMGCS1-207ENST00000514610 CCDC181Q5TID7 509 aa6.66□□□□□ -1.34
HMGCS1-207ENST00000514610 SLFN13Q68D06 897 aa6.66□□□□□ -1.34
HMGCS1-207ENST00000514610 FRMD5Q7Z6J6 570 aa6.66□□□□□ -1.34
HMGCS1-207ENST00000514610 TAX1BP1Q86VP1 789 aa6.66□□□□□ -1.34
HMGCS1-207ENST00000514610 ZBTB34Q8NCN2 500 aa6.66□□□□□ -1.34
HMGCS1-207ENST00000514610 OR5M3Q8NGP4 307 aa6.66□□□□□ -1.34
HMGCS1-207ENST00000514610 PPP1R35Q8TAP8 253 aa6.66□□□□□ -1.34
HMGCS1-207ENST00000514610 CCHCR1Q8TD31 782 aa6.66□□□□□ -1.34
HMGCS1-207ENST00000514610 STON2Q8WXE9 905 aa6.66□□□□□ -1.34
HMGCS1-207ENST00000514610 CEP95Q96GE4 821 aa6.66□□□□□ -1.34
HMGCS1-207ENST00000514610 PLA2G12BQ9BX93 195 aa6.66□□□□□ -1.34
HMGCS1-207ENST00000514610 PARD6AQ9NPB6 346 aa6.66□□□□□ -1.34
HMGCS1-207ENST00000514610 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.66□□□□□ -1.34
HMGCS1-207ENST00000514610 RCAN3Q9UKA8 241 aa6.66□□□□□ -1.34
HMGCS1-207ENST00000514610 CFAP20Q9Y6A4 193 aaKnown RBP6.66□□□□□ -1.34
HMGCS1-207ENST00000514610 ATRNL1Q5VV63 1379 aa6.66□□□□□ -1.34
HMGCS1-207ENST00000514610 A0A1W2PRX2 142 aa6.65□□□□□ -1.34
HMGCS1-207ENST00000514610 GOLGA6CA6NDK9 693 aa6.65□□□□□ -1.34
HMGCS1-207ENST00000514610 GOLGA6BA6NDN3 693 aa6.65□□□□□ -1.34
HMGCS1-207ENST00000514610 LRRC14BA6NHZ5 514 aa6.65□□□□□ -1.34
HMGCS1-207ENST00000514610 ALDH2P05091 517 aa6.65□□□□□ -1.34
HMGCS1-207ENST00000514610 GOLGA6DP0CG33 693 aa6.65□□□□□ -1.34
HMGCS1-207ENST00000514610 PER3P56645 1201 aa6.65□□□□□ -1.34
HMGCS1-207ENST00000514610 ATP8B2P98198 1209 aa6.65□□□□□ -1.34
HMGCS1-207ENST00000514610 CDC42EP1Q00587 391 aa6.65□□□□□ -1.34
HMGCS1-207ENST00000514610 MRPL49Q13405 166 aaKnown RBP6.65□□□□□ -1.34
HMGCS1-207ENST00000514610 GALEQ14376 348 aa6.65□□□□□ -1.34
HMGCS1-207ENST00000514610 GRM3Q14832 879 aa6.65□□□□□ -1.34
HMGCS1-207ENST00000514610 KRTAP19-4Q3LI73 84 aa6.65□□□□□ -1.34
HMGCS1-207ENST00000514610 ZNF572Q7Z3I7 529 aaPredicted RBP6.65□□□□□ -1.34
HMGCS1-207ENST00000514610 RELTQ969Z4 430 aa6.65□□□□□ -1.34
HMGCS1-207ENST00000514610 MRGPRX4Q96LA9 322 aa6.65□□□□□ -1.34
HMGCS1-207ENST00000514610 KCNH6Q9H252 994 aa6.65□□□□□ -1.34
HMGCS1-207ENST00000514610 LANCL2Q9NS86 450 aa6.65□□□□□ -1.34
HMGCS1-207ENST00000514610 TDP1Q9NUW8 608 aa6.65□□□□□ -1.34
HMGCS1-207ENST00000514610 GOLGA6AQ9NYA3 693 aa6.65□□□□□ -1.34
HMGCS1-207ENST00000514610 AJAP1Q9UKB5 411 aaPredicted RBP6.65□□□□□ -1.34
HMGCS1-207ENST00000514610 A6NNZ2 444 aa6.64□□□□□ -1.35
HMGCS1-207ENST00000514610 SGTAO43765 313 aa6.64□□□□□ -1.35
HMGCS1-207ENST00000514610 ALOX15P16050 662 aaPredicted RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms