RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 CTNNB1P35222 781 aa9□□□□□ -0.97
NEDD4-210ENST00000513957 STRN3Q13033 797 aa9□□□□□ -0.97
NEDD4-210ENST00000513957 ALCAMQ13740 583 aa9□□□□□ -0.97
NEDD4-210ENST00000513957 GIT2Q14161 759 aa9□□□□□ -0.97
NEDD4-210ENST00000513957 TIGD5Q53EQ6 642 aa9□□□□□ -0.97
NEDD4-210ENST00000513957 ARSHQ5FYA8 562 aa9□□□□□ -0.97
NEDD4-210ENST00000513957 UBXN11Q5T124 520 aa9□□□□□ -0.97
NEDD4-210ENST00000513957 RESP18Q5W5W9 173 aa9□□□□□ -0.97
NEDD4-210ENST00000513957 ADALQ6DHV7 355 aa9□□□□□ -0.97
NEDD4-210ENST00000513957 CNNM4Q6P4Q7 775 aa9□□□□□ -0.97
NEDD4-210ENST00000513957 USP49Q70CQ1 688 aa9□□□□□ -0.97
NEDD4-210ENST00000513957 LEO1Q8WVC0 666 aaPredicted RBP9□□□□□ -0.97
NEDD4-210ENST00000513957 MYLIPQ8WY64 445 aa9□□□□□ -0.97
NEDD4-210ENST00000513957 ARNTL2Q8WYA1 636 aa9□□□□□ -0.97
NEDD4-210ENST00000513957 SPATA32Q96LK8 384 aa9□□□□□ -0.97
NEDD4-210ENST00000513957 CASD1Q96PB1 797 aa9□□□□□ -0.97
NEDD4-210ENST00000513957 PLIN2Q99541 437 aa9□□□□□ -0.97
NEDD4-210ENST00000513957 C17orf80Q9BSJ5 609 aa9□□□□□ -0.97
NEDD4-210ENST00000513957 RSAD1Q9HA92 442 aa9□□□□□ -0.97
NEDD4-210ENST00000513957 OLFML3Q9NRN5 406 aa9□□□□□ -0.97
NEDD4-210ENST00000513957 RNF19AQ9NV58 838 aa9□□□□□ -0.97
NEDD4-210ENST00000513957 TFIP11Q9UBB9 837 aaKnown RBP9□□□□□ -0.97
NEDD4-210ENST00000513957 LZTS1Q9Y250 596 aa9□□□□□ -0.97
NEDD4-210ENST00000513957 TNFSF13BQ9Y275 285 aa9□□□□□ -0.97
NEDD4-210ENST00000513957 ZDHHC9Q9Y397 364 aa9□□□□□ -0.97
NEDD4-210ENST00000513957 IPPQ9Y573 584 aa9□□□□□ -0.97
NEDD4-210ENST00000513957 PCDHB12Q9Y5F1 795 aa9□□□□□ -0.97
NEDD4-210ENST00000513957 MRPL42Q9Y6G3 142 aaKnown RBP9□□□□□ -0.97
NEDD4-210ENST00000513957 FRMD3A2A2Y4 597 aa8.99□□□□□ -0.97
NEDD4-210ENST00000513957 LPXNO60711 386 aa8.99□□□□□ -0.97
NEDD4-210ENST00000513957 ARHGEF15O94989 841 aa8.99□□□□□ -0.97
NEDD4-210ENST00000513957 MYL1P05976 194 aa8.99□□□□□ -0.97
NEDD4-210ENST00000513957 FGFR1P11362 822 aa8.99□□□□□ -0.97
NEDD4-210ENST00000513957 ITGA4P13612 1032 aa8.99□□□□□ -0.97
NEDD4-210ENST00000513957 CMA1P23946 247 aa8.99□□□□□ -0.97
NEDD4-210ENST00000513957 KYAT1Q16773 422 aa8.99□□□□□ -0.97
NEDD4-210ENST00000513957 NOMO2Q5JPE7 1267 aa8.99□□□□□ -0.97
NEDD4-210ENST00000513957 CLLU1OSQ5K130 101 aa8.99□□□□□ -0.97
NEDD4-210ENST00000513957 SPECC1Q5M775 1068 aa8.99□□□□□ -0.97
NEDD4-210ENST00000513957 ATF7IP2Q5U623 682 aa8.99□□□□□ -0.97
NEDD4-210ENST00000513957 PDE12Q6L8Q7 609 aaKnown RBP8.99□□□□□ -0.97
NEDD4-210ENST00000513957 SHC4Q6S5L8 630 aa8.99□□□□□ -0.97
NEDD4-210ENST00000513957 FAM178BQ8IXR5 827 aa8.99□□□□□ -0.97
NEDD4-210ENST00000513957 TMEM161BQ8NDZ6 487 aa8.99□□□□□ -0.97
NEDD4-210ENST00000513957 MAFAQ8NHW3 353 aaPredicted RBP8.99□□□□□ -0.97
NEDD4-210ENST00000513957 LRRC15Q8TF66 581 aa8.99□□□□□ -0.97
NEDD4-210ENST00000513957 PPP2R3CQ969Q6 453 aa8.99□□□□□ -0.97
NEDD4-210ENST00000513957 MRPL38Q96DV4 380 aaKnown RBP8.99□□□□□ -0.97
NEDD4-210ENST00000513957 CCDC34Q96HJ3 373 aa8.99□□□□□ -0.97
NEDD4-210ENST00000513957 CPB2Q96IY4 423 aa8.99□□□□□ -0.97
NEDD4-210ENST00000513957 TMEM175Q9BSA9 504 aa8.99□□□□□ -0.97
NEDD4-210ENST00000513957 PDZD7Q9H5P4 517 aa8.99□□□□□ -0.97
NEDD4-210ENST00000513957 NPDC1Q9NQX5 325 aaPredicted RBP8.99□□□□□ -0.97
NEDD4-210ENST00000513957 KBTBD4Q9NVX7 518 aa8.99□□□□□ -0.97
NEDD4-210ENST00000513957 PCDHA7Q9UN72 937 aa8.99□□□□□ -0.97
NEDD4-210ENST00000513957 COL6A3P12111 3177 aa8.99□□□□□ -0.97
NEDD4-210ENST00000513957 PRRC2BQ5JSZ5 2229 aaKnown RBP8.99□□□□□ -0.97
NEDD4-210ENST00000513957 ANK1P16157 1881 aa8.98□□□□□ -0.97
NEDD4-210ENST00000513957 FAM237AA0A1B0GTK4 181 aa8.98□□□□□ -0.97
NEDD4-210ENST00000513957 A0A1W2PQ27 194 aa8.98□□□□□ -0.97
NEDD4-210ENST00000513957 A0A1W2PQ64 194 aa8.98□□□□□ -0.97
NEDD4-210ENST00000513957 A0A1W2PQD8 194 aa8.98□□□□□ -0.97
NEDD4-210ENST00000513957 K7ENM7 598 aa8.98□□□□□ -0.97
NEDD4-210ENST00000513957 SLC16A4O15374 487 aa8.98□□□□□ -0.97
NEDD4-210ENST00000513957 B4GALT5O43286 388 aa8.98□□□□□ -0.97
NEDD4-210ENST00000513957 NR1I2O75469 434 aa8.98□□□□□ -0.97
NEDD4-210ENST00000513957 OFD1O75665 1012 aa8.98□□□□□ -0.97
NEDD4-210ENST00000513957 TOM1L1O75674 476 aa8.98□□□□□ -0.97
NEDD4-210ENST00000513957 PIGRP01833 764 aa8.98□□□□□ -0.97
NEDD4-210ENST00000513957 MCF2P10911 925 aa8.98□□□□□ -0.97
NEDD4-210ENST00000513957 PROZP22891 400 aa8.98□□□□□ -0.97
NEDD4-210ENST00000513957 ALDH7A1P49419 539 aaKnown RBP8.98□□□□□ -0.97
NEDD4-210ENST00000513957 GTF2BQ00403 316 aa8.98□□□□□ -0.97
NEDD4-210ENST00000513957 PLCB3Q01970 1234 aa8.98□□□□□ -0.97
NEDD4-210ENST00000513957 GRIK3Q13003 919 aa8.98□□□□□ -0.97
NEDD4-210ENST00000513957 GPM6BQ13491 265 aa8.98□□□□□ -0.97
NEDD4-210ENST00000513957 BMS1Q14692 1282 aaKnown RBP8.98□□□□□ -0.97
NEDD4-210ENST00000513957 ZNF568Q3ZCX4 644 aa8.98□□□□□ -0.97
NEDD4-210ENST00000513957 PAN2Q504Q3 1202 aaKnown RBP8.98□□□□□ -0.97
NEDD4-210ENST00000513957 SPOUT1Q5T280 376 aaKnown RBP8.98□□□□□ -0.97
NEDD4-210ENST00000513957 MPZL3Q6UWV2 235 aa8.98□□□□□ -0.97
NEDD4-210ENST00000513957 AGMOQ6ZNB7 445 aa8.98□□□□□ -0.97
NEDD4-210ENST00000513957 STXBP4Q6ZWJ1 553 aa8.98□□□□□ -0.97
NEDD4-210ENST00000513957 HAUS6Q7Z4H7 955 aa8.98□□□□□ -0.97
NEDD4-210ENST00000513957 MAP4K3Q8IVH8 894 aa8.98□□□□□ -0.97
NEDD4-210ENST00000513957 CCDC65Q8IXS2 484 aa8.98□□□□□ -0.97
NEDD4-210ENST00000513957 MYCT1Q8N699 235 aa8.98□□□□□ -0.97
NEDD4-210ENST00000513957 COLGALT1Q8NBJ5 622 aa8.98□□□□□ -0.97
NEDD4-210ENST00000513957 RNF169Q8NCN4 708 aa8.98□□□□□ -0.97
NEDD4-210ENST00000513957 SMG8Q8ND04 991 aaKnown RBP8.98□□□□□ -0.97
NEDD4-210ENST00000513957 HELQQ8TDG4 1101 aa8.98□□□□□ -0.97
NEDD4-210ENST00000513957 GDPD5Q8WTR4 605 aa8.98□□□□□ -0.97
NEDD4-210ENST00000513957 ZNF558Q96NG5 402 aa8.98□□□□□ -0.97
NEDD4-210ENST00000513957 RPS6KC1Q96S38 1066 aa8.98□□□□□ -0.97
NEDD4-210ENST00000513957 TSPAN18Q96SJ8 248 aa8.98□□□□□ -0.97
NEDD4-210ENST00000513957 ACO2Q99798 780 aaKnown RBP8.98□□□□□ -0.97
NEDD4-210ENST00000513957 EPAS1Q99814 870 aa8.98□□□□□ -0.97
NEDD4-210ENST00000513957 KIFC3Q9BVG8 833 aa8.98□□□□□ -0.97
NEDD4-210ENST00000513957 CWH43Q9H720 699 aa8.98□□□□□ -0.97
NEDD4-210ENST00000513957 PTPRHQ9HD43 1115 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms