RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 TUBGCP5Q96RT8 1024 aa5.55□□□□□ -1.52
CLDND1-228ENST00000513873 KCND1Q9NSA2 647 aa5.55□□□□□ -1.52
CLDND1-228ENST00000513873 BABAM1Q9NWV8 329 aa5.55□□□□□ -1.52
CLDND1-228ENST00000513873 BTBD7Q9P203 1132 aa5.55□□□□□ -1.52
CLDND1-228ENST00000513873 RRP7AQ9Y3A4 280 aaKnown RBP5.55□□□□□ -1.52
CLDND1-228ENST00000513873 PRKAB1Q9Y478 270 aa5.55□□□□□ -1.52
CLDND1-228ENST00000513873 SPO11Q9Y5K1 396 aa5.55□□□□□ -1.52
CLDND1-228ENST00000513873 TNS2Q63HR2 1409 aa5.55□□□□□ -1.52
CLDND1-228ENST00000513873 KIAA0232Q92628 1395 aa5.55□□□□□ -1.52
CLDND1-228ENST00000513873 SOS1Q07889 1333 aaPredicted RBP5.54□□□□□ -1.52
CLDND1-228ENST00000513873 A0A087X0B3 334 aa5.54□□□□□ -1.52
CLDND1-228ENST00000513873 UBA6A0AVT1 1052 aaPredicted RBP5.54□□□□□ -1.52
CLDND1-228ENST00000513873 GSG1L2A8MUP6 293 aa5.54□□□□□ -1.52
CLDND1-228ENST00000513873 NOBOXO60393 691 aa5.54□□□□□ -1.52
CLDND1-228ENST00000513873 CUTAO60888 179 aa5.54□□□□□ -1.52
CLDND1-228ENST00000513873 IL18BPO95998 194 aa5.54□□□□□ -1.52
CLDND1-228ENST00000513873 HSPA1AP0DMV8 641 aaKnown RBP5.54□□□□□ -1.52
CLDND1-228ENST00000513873 HSPA1BP0DMV9 641 aaKnown RBP5.54□□□□□ -1.52
CLDND1-228ENST00000513873 ATP2A2P16615 1042 aaKnown RBP5.54□□□□□ -1.52
CLDND1-228ENST00000513873 CD40P25942 277 aa5.54□□□□□ -1.52
CLDND1-228ENST00000513873 APEX1P27695 318 aaKnown RBP5.54□□□□□ -1.52
CLDND1-228ENST00000513873 MC4RP32245 332 aa5.54□□□□□ -1.52
CLDND1-228ENST00000513873 FSTL1Q12841 308 aa5.54□□□□□ -1.52
CLDND1-228ENST00000513873 SURF1Q15526 300 aa5.54□□□□□ -1.52
CLDND1-228ENST00000513873 ALDH1L2Q3SY69 923 aa5.54□□□□□ -1.52
CLDND1-228ENST00000513873 PLEKHO1Q53GL0 409 aaPredicted RBP5.54□□□□□ -1.52
CLDND1-228ENST00000513873 HSP90AB2PQ58FF8 381 aa5.54□□□□□ -1.52
CLDND1-228ENST00000513873 TTC38Q5R3I4 469 aa5.54□□□□□ -1.52
CLDND1-228ENST00000513873 RNF187Q5TA31 235 aaPredicted RBP5.54□□□□□ -1.52
CLDND1-228ENST00000513873 FSTL4Q6MZW2 842 aa5.54□□□□□ -1.52
CLDND1-228ENST00000513873 Q6ZUG5 572 aa5.54□□□□□ -1.52
CLDND1-228ENST00000513873 PTF1AQ7RTS3 328 aa5.54□□□□□ -1.52
CLDND1-228ENST00000513873 CHTF18Q8WVB6 975 aa5.54□□□□□ -1.52
CLDND1-228ENST00000513873 ZCCHC14Q8WYQ9 949 aaKnown RBP5.54□□□□□ -1.52
CLDND1-228ENST00000513873 TEPSINQ96N21 525 aa5.54□□□□□ -1.52
CLDND1-228ENST00000513873 ELF4Q99607 663 aaPredicted RBP5.54□□□□□ -1.52
CLDND1-228ENST00000513873 OR10A5Q9H207 317 aa5.54□□□□□ -1.52
CLDND1-228ENST00000513873 PAPPAQ13219 1627 aa5.54□□□□□ -1.52
CLDND1-228ENST00000513873 KIF16BQ96L93 1317 aa5.53□□□□□ -1.52
CLDND1-228ENST00000513873 PHRF1Q9P1Y6 1649 aaKnown RBP5.53□□□□□ -1.52
CLDND1-228ENST00000513873 ZNF891A8MT65 544 aaPredicted RBP5.53□□□□□ -1.52
CLDND1-228ENST00000513873 LSSP48449 732 aa5.53□□□□□ -1.52
CLDND1-228ENST00000513873 MASP1P48740 699 aa5.53□□□□□ -1.52
CLDND1-228ENST00000513873 SLC6A3Q01959 620 aa5.53□□□□□ -1.52
CLDND1-228ENST00000513873 DSG1Q02413 1049 aa5.53□□□□□ -1.52
CLDND1-228ENST00000513873 RTP5Q14D33 572 aa5.53□□□□□ -1.52
CLDND1-228ENST00000513873 EPHA7Q15375 998 aa5.53□□□□□ -1.52
CLDND1-228ENST00000513873 DDB1Q16531 1140 aa5.53□□□□□ -1.52
CLDND1-228ENST00000513873 C1orf141Q5JVX7 400 aa5.53□□□□□ -1.52
CLDND1-228ENST00000513873 EGFLAMQ63HQ2 1017 aa5.53□□□□□ -1.52
CLDND1-228ENST00000513873 SLFN12LQ6IEE8 588 aa5.53□□□□□ -1.52
CLDND1-228ENST00000513873 ARHGEF25Q86VW2 580 aa5.53□□□□□ -1.52
CLDND1-228ENST00000513873 REXO1L1PQ8IX06 675 aa5.53□□□□□ -1.52
CLDND1-228ENST00000513873 KBTBD2Q8IY47 623 aa5.53□□□□□ -1.52
CLDND1-228ENST00000513873 FTSJ3Q8IY81 847 aaKnown RBP5.53□□□□□ -1.52
CLDND1-228ENST00000513873 C7orf31Q8N865 590 aa5.53□□□□□ -1.52
CLDND1-228ENST00000513873 NUDT10Q8NFP7 164 aa5.53□□□□□ -1.52
CLDND1-228ENST00000513873 RPGRQ92834 1020 aaKnown RBP5.53□□□□□ -1.52
CLDND1-228ENST00000513873 NUDT11Q96G61 164 aa5.53□□□□□ -1.52
CLDND1-228ENST00000513873 TTC1Q99614 292 aa5.53□□□□□ -1.52
CLDND1-228ENST00000513873 FOXB1Q99853 325 aa5.53□□□□□ -1.52
CLDND1-228ENST00000513873 JADE2Q9NQC1 790 aa5.53□□□□□ -1.52
CLDND1-228ENST00000513873 KCNG1Q9UIX4 513 aa5.53□□□□□ -1.52
CLDND1-228ENST00000513873 LAS1LQ9Y4W2 734 aaKnown RBP5.53□□□□□ -1.52
CLDND1-228ENST00000513873 ITSN1Q15811 1721 aa5.53□□□□□ -1.52
CLDND1-228ENST00000513873 PLEKHG2Q9H7P9 1386 aa5.53□□□□□ -1.52
CLDND1-228ENST00000513873 LRRC37A3O60309 1634 aa5.52□□□□□ -1.53
CLDND1-228ENST00000513873 COL3A1P02461 1466 aaPredicted RBP5.52□□□□□ -1.53
CLDND1-228ENST00000513873 ZNF536O15090 1300 aa5.52□□□□□ -1.53
CLDND1-228ENST00000513873 USP19O94966 1318 aa5.52□□□□□ -1.53
CLDND1-228ENST00000513873 IGSF1Q8N6C5 1336 aa5.52□□□□□ -1.53
CLDND1-228ENST00000513873 RASSF10A6NK89 507 aa5.52□□□□□ -1.53
CLDND1-228ENST00000513873 DVL2O14641 736 aa5.52□□□□□ -1.53
CLDND1-228ENST00000513873 APOL3O95236 402 aa5.52□□□□□ -1.53
CLDND1-228ENST00000513873 FKBP9O95302 570 aa5.52□□□□□ -1.53
CLDND1-228ENST00000513873 HSP90AB1P08238 724 aaKnown RBP5.52□□□□□ -1.53
CLDND1-228ENST00000513873 PTX3P26022 381 aaPredicted RBP5.52□□□□□ -1.53
CLDND1-228ENST00000513873 LSP1P33241 339 aa5.52□□□□□ -1.53
CLDND1-228ENST00000513873 ADCY8P40145 1251 aa5.52□□□□□ -1.53
CLDND1-228ENST00000513873 RGS19P49795 217 aa5.52□□□□□ -1.53
CLDND1-228ENST00000513873 MEOX1P50221 254 aa5.52□□□□□ -1.53
CLDND1-228ENST00000513873 IL13RA1P78552 427 aa5.52□□□□□ -1.53
CLDND1-228ENST00000513873 ALDH6A1Q02252 535 aaKnown RBP5.52□□□□□ -1.53
CLDND1-228ENST00000513873 USP10Q14694 798 aaKnown RBP5.52□□□□□ -1.53
CLDND1-228ENST00000513873 DHCR24Q15392 516 aa5.52□□□□□ -1.53
CLDND1-228ENST00000513873 PRAMEF9Q5VWM5 478 aa5.52□□□□□ -1.53
CLDND1-228ENST00000513873 ZKSCAN2Q63HK3 967 aa5.52□□□□□ -1.53
CLDND1-228ENST00000513873 LRSAM1Q6UWE0 723 aa5.52□□□□□ -1.53
CLDND1-228ENST00000513873 FKBP9P1Q75LS8 142 aa5.52□□□□□ -1.53
CLDND1-228ENST00000513873 RALYLQ86SE5 291 aaKnown RBP5.52□□□□□ -1.53
CLDND1-228ENST00000513873 PHYKPLQ8IUZ5 450 aa5.52□□□□□ -1.53
CLDND1-228ENST00000513873 SMC1BQ8NDV3 1235 aa5.52□□□□□ -1.53
CLDND1-228ENST00000513873 RAPGEF4Q8WZA2 1011 aa5.52□□□□□ -1.53
CLDND1-228ENST00000513873 MAML3Q96JK9 1138 aa5.52□□□□□ -1.53
CLDND1-228ENST00000513873 AMNQ9BXJ7 453 aa5.52□□□□□ -1.53
CLDND1-228ENST00000513873 SPC25Q9HBM1 224 aa5.52□□□□□ -1.53
CLDND1-228ENST00000513873 SYNPO2Q9UMS6 1093 aa5.52□□□□□ -1.53
CLDND1-228ENST00000513873 LMO7Q8WWI1 1683 aa5.52□□□□□ -1.53
CLDND1-228ENST00000513873 FANCIQ9NVI1 1328 aa5.51□□□□□ -1.53
CLDND1-228ENST00000513873 TUBGCP6Q96RT7 1819 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms