RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 FNDC1Q4ZHG4 1894 aaPredicted RBP10.74□□□□□ -0.69
TOPBP1-209ENST00000513818 A0A0U1RQF3 1178 aa10.74□□□□□ -0.69
TOPBP1-209ENST00000513818 A0A1B0GUA9 196 aa10.74□□□□□ -0.69
TOPBP1-209ENST00000513818 PVALEFA0A1B0GWK0 134 aa10.74□□□□□ -0.69
TOPBP1-209ENST00000513818 H0YCG3 227 aa10.74□□□□□ -0.69
TOPBP1-209ENST00000513818 ABLIM1O14639 778 aa10.74□□□□□ -0.69
TOPBP1-209ENST00000513818 MAP3K13O43283 966 aa10.74□□□□□ -0.69
TOPBP1-209ENST00000513818 TLL1O43897 1013 aa10.74□□□□□ -0.69
TOPBP1-209ENST00000513818 GJB5O95377 273 aa10.74□□□□□ -0.69
TOPBP1-209ENST00000513818 CHRM1P11229 460 aaPredicted RBP10.74□□□□□ -0.69
TOPBP1-209ENST00000513818 AKAP5P24588 427 aa10.74□□□□□ -0.69
TOPBP1-209ENST00000513818 AXLP30530 894 aa10.74□□□□□ -0.69
TOPBP1-209ENST00000513818 HOXD13P35453 343 aa10.74□□□□□ -0.69
TOPBP1-209ENST00000513818 AFF1P51825 1210 aaKnown RBP10.74□□□□□ -0.69
TOPBP1-209ENST00000513818 NCBP1Q09161 790 aaKnown RBP10.74□□□□□ -0.69
TOPBP1-209ENST00000513818 CLLU1OSQ5K130 101 aa10.74□□□□□ -0.69
TOPBP1-209ENST00000513818 ZBTB41Q5SVQ8 909 aa10.74□□□□□ -0.69
TOPBP1-209ENST00000513818 SLC27A1Q6PCB7 646 aa10.74□□□□□ -0.69
TOPBP1-209ENST00000513818 EPM2AIP1Q7L775 607 aaPredicted RBP10.74□□□□□ -0.69
TOPBP1-209ENST00000513818 ZNF598Q86UK7 904 aaKnown RBP10.74□□□□□ -0.69
TOPBP1-209ENST00000513818 NPAS4Q8IUM7 802 aa10.74□□□□□ -0.69
TOPBP1-209ENST00000513818 TMEM192Q8IY95 271 aa10.74□□□□□ -0.69
TOPBP1-209ENST00000513818 SYCP3Q8IZU3 236 aa10.74□□□□□ -0.69
TOPBP1-209ENST00000513818 ZSWIM2Q8NEG5 633 aa10.74□□□□□ -0.69
TOPBP1-209ENST00000513818 HELQQ8TDG4 1101 aa10.74□□□□□ -0.69
TOPBP1-209ENST00000513818 CCDC34Q96HJ3 373 aa10.74□□□□□ -0.69
TOPBP1-209ENST00000513818 TCHPQ9BT92 498 aa10.74□□□□□ -0.69
TOPBP1-209ENST00000513818 ZBED2Q9BTP6 218 aa10.74□□□□□ -0.69
TOPBP1-209ENST00000513818 PBX4Q9BYU1 374 aa10.74□□□□□ -0.69
TOPBP1-209ENST00000513818 NUP62CLQ9H1M0 184 aa10.74□□□□□ -0.69
TOPBP1-209ENST00000513818 ST6GALNAC4Q9H4F1 302 aa10.74□□□□□ -0.69
TOPBP1-209ENST00000513818 CHST12Q9NRB3 414 aa10.74□□□□□ -0.69
TOPBP1-209ENST00000513818 SNTG2Q9NY99 539 aa10.74□□□□□ -0.69
TOPBP1-209ENST00000513818 KLK14Q9P0G3 267 aa10.74□□□□□ -0.69
TOPBP1-209ENST00000513818 TNFSF13BQ9Y275 285 aa10.74□□□□□ -0.69
TOPBP1-209ENST00000513818 INPP5FQ9Y2H2 1132 aa10.74□□□□□ -0.69
TOPBP1-209ENST00000513818 RHOBTB3O94955 611 aa10.73□□□□□ -0.69
TOPBP1-209ENST00000513818 MYL1P05976 194 aa10.73□□□□□ -0.69
TOPBP1-209ENST00000513818 PROZP22891 400 aa10.73□□□□□ -0.69
TOPBP1-209ENST00000513818 MLH1P40692 756 aa10.73□□□□□ -0.69
TOPBP1-209ENST00000513818 NOLC1Q14978 699 aaKnown RBP eCLIP10.73□□□□□ -0.69
TOPBP1-209ENST00000513818 MPZL3Q6UWV2 235 aa10.73□□□□□ -0.69
TOPBP1-209ENST00000513818 ZPBP2Q6X784 338 aa10.73□□□□□ -0.69
TOPBP1-209ENST00000513818 AGMOQ6ZNB7 445 aa10.73□□□□□ -0.69
TOPBP1-209ENST00000513818 THNSL1Q8IYQ7 743 aa10.73□□□□□ -0.69
TOPBP1-209ENST00000513818 CRIPAKQ8N1N5 446 aa10.73□□□□□ -0.69
TOPBP1-209ENST00000513818 NOC3LQ8WTT2 800 aaKnown RBP10.73□□□□□ -0.69
TOPBP1-209ENST00000513818 TOP1MTQ969P6 601 aa10.73□□□□□ -0.69
TOPBP1-209ENST00000513818 CCDC47Q96A33 483 aaKnown RBP10.73□□□□□ -0.69
TOPBP1-209ENST00000513818 HVCN1Q96D96 273 aa10.73□□□□□ -0.69
TOPBP1-209ENST00000513818 CCDC51Q96ER9 411 aa10.73□□□□□ -0.69
TOPBP1-209ENST00000513818 LRCH3Q96II8 777 aa10.73□□□□□ -0.69
TOPBP1-209ENST00000513818 ZFP42Q96MM3 310 aa10.73□□□□□ -0.69
TOPBP1-209ENST00000513818 ACCSQ96QU6 501 aa10.73□□□□□ -0.69
TOPBP1-209ENST00000513818 YME1L1Q96TA2 773 aa10.73□□□□□ -0.69
TOPBP1-209ENST00000513818 ADPGKQ9BRR6 497 aa10.73□□□□□ -0.69
TOPBP1-209ENST00000513818 NKX2-4Q9H2Z4 354 aa10.73□□□□□ -0.69
TOPBP1-209ENST00000513818 PTPRHQ9HD43 1115 aa10.73□□□□□ -0.69
TOPBP1-209ENST00000513818 TMEM161AQ9NX61 479 aa10.73□□□□□ -0.69
TOPBP1-209ENST00000513818 PCDHB7Q9Y5E2 793 aa10.73□□□□□ -0.69
TOPBP1-209ENST00000513818 COL4A4P53420 1690 aaPredicted RBP10.73□□□□□ -0.69
TOPBP1-209ENST00000513818 RALGAPA2Q2PPJ7 1873 aa10.72□□□□□ -0.69
TOPBP1-209ENST00000513818 TBKBP1A7MCY6 615 aa10.72□□□□□ -0.69
TOPBP1-209ENST00000513818 CLIC2O15247 247 aa10.72□□□□□ -0.69
TOPBP1-209ENST00000513818 EIF3DO15371 548 aaKnown RBP eCLIP10.72□□□□□ -0.69
TOPBP1-209ENST00000513818 TOM1L1O75674 476 aa10.72□□□□□ -0.69
TOPBP1-209ENST00000513818 DGKIO75912 1065 aa10.72□□□□□ -0.69
TOPBP1-209ENST00000513818 RECQL4O94761 1208 aa10.72□□□□□ -0.69
TOPBP1-209ENST00000513818 SMC2O95347 1197 aa10.72□□□□□ -0.69
TOPBP1-209ENST00000513818 PIGRP01833 764 aa10.72□□□□□ -0.69
TOPBP1-209ENST00000513818 CA3P07451 260 aa10.72□□□□□ -0.69
TOPBP1-209ENST00000513818 ITGA4P13612 1032 aa10.72□□□□□ -0.69
TOPBP1-209ENST00000513818 TNFSF9P41273 254 aa10.72□□□□□ -0.69
TOPBP1-209ENST00000513818 RAB27AP51159 221 aa10.72□□□□□ -0.69
TOPBP1-209ENST00000513818 FAM189BP81408 668 aa10.72□□□□□ -0.69
TOPBP1-209ENST00000513818 KCNB1Q14721 858 aa10.72□□□□□ -0.69
TOPBP1-209ENST00000513818 PCBP1Q15365 356 aaKnown RBP eCLIP10.72□□□□□ -0.69
TOPBP1-209ENST00000513818 DCAF4L1Q3SXM0 396 aa10.72□□□□□ -0.69
TOPBP1-209ENST00000513818 GLRA4Q5JXX5 417 aa10.72□□□□□ -0.69
TOPBP1-209ENST00000513818 TMEM130Q8N3G9 435 aa10.72□□□□□ -0.69
TOPBP1-209ENST00000513818 SAAL1Q96ER3 474 aa10.72□□□□□ -0.69
TOPBP1-209ENST00000513818 GAD1Q99259 594 aa10.72□□□□□ -0.69
TOPBP1-209ENST00000513818 CBWD1Q9BRT8 395 aa10.72□□□□□ -0.69
TOPBP1-209ENST00000513818 MSTO1Q9BUK6 570 aa10.72□□□□□ -0.69
TOPBP1-209ENST00000513818 PCIF1Q9H4Z3 704 aa10.72□□□□□ -0.69
TOPBP1-209ENST00000513818 RSAD1Q9HA92 442 aa10.72□□□□□ -0.69
TOPBP1-209ENST00000513818 RC3H2Q9HBD1 1191 aaKnown RBP10.72□□□□□ -0.69
TOPBP1-209ENST00000513818 CACNG4Q9UBN1 327 aa10.72□□□□□ -0.69
TOPBP1-209ENST00000513818 PARP2Q9UGN5 583 aa10.72□□□□□ -0.69
TOPBP1-209ENST00000513818 HOOK1Q9UJC3 728 aaKnown RBP10.72□□□□□ -0.69
TOPBP1-209ENST00000513818 MTUS1Q9ULD2 1270 aa10.72□□□□□ -0.69
TOPBP1-209ENST00000513818 PCDHB13Q9Y5F0 798 aa10.72□□□□□ -0.69
TOPBP1-209ENST00000513818 CDH23Q9H251 3354 aa10.72□□□□□ -0.69
TOPBP1-209ENST00000513818 NLRC5Q86WI3 1866 aa10.72□□□□□ -0.69
TOPBP1-209ENST00000513818 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.71□□□□□ -0.69
TOPBP1-209ENST00000513818 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.71□□□□□ -0.69
TOPBP1-209ENST00000513818 GOLGA8IPA6NC78 632 aa10.71□□□□□ -0.69
TOPBP1-209ENST00000513818 GOLGA8JA6NMD2 632 aa10.71□□□□□ -0.69
TOPBP1-209ENST00000513818 CLDN3O15551 220 aa10.71□□□□□ -0.69
TOPBP1-209ENST00000513818 MEFVO15553 781 aaPredicted RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms