RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 TLL2Q9Y6L7 1015 aa9.08□□□□□ -0.96
RNF4-220ENST00000513578 CASP8AP2Q9UKL3 1982 aa9.07□□□□□ -0.96
RNF4-220ENST00000513578 GOLGA8IPA6NC78 632 aa9.07□□□□□ -0.96
RNF4-220ENST00000513578 LRRIQ4A6NIV6 560 aa9.07□□□□□ -0.96
RNF4-220ENST00000513578 GOLGA8JA6NMD2 632 aa9.07□□□□□ -0.96
RNF4-220ENST00000513578 FAM155AB1AL88 458 aaPredicted RBP9.07□□□□□ -0.96
RNF4-220ENST00000513578 TOM1L1O75674 476 aa9.07□□□□□ -0.96
RNF4-220ENST00000513578 C22orf31O95567 290 aa9.07□□□□□ -0.96
RNF4-220ENST00000513578 PROZP22891 400 aa9.07□□□□□ -0.96
RNF4-220ENST00000513578 ADCYAP1R1P41586 468 aa9.07□□□□□ -0.96
RNF4-220ENST00000513578 TM4SF4P48230 202 aa9.07□□□□□ -0.96
RNF4-220ENST00000513578 GCLMP48507 274 aa9.07□□□□□ -0.96
RNF4-220ENST00000513578 PTENP60484 403 aa9.07□□□□□ -0.96
RNF4-220ENST00000513578 AMPD2Q01433 879 aa9.07□□□□□ -0.96
RNF4-220ENST00000513578 CYP27A1Q02318 531 aa9.07□□□□□ -0.96
RNF4-220ENST00000513578 PTK2Q05397 1052 aa9.07□□□□□ -0.96
RNF4-220ENST00000513578 GFPT1Q06210 699 aaPredicted RBP9.07□□□□□ -0.96
RNF4-220ENST00000513578 LAMTOR4Q0VGL1 99 aa9.07□□□□□ -0.96
RNF4-220ENST00000513578 DRAP1Q14919 205 aaPredicted RBP9.07□□□□□ -0.96
RNF4-220ENST00000513578 SURF1Q15526 300 aa9.07□□□□□ -0.96
RNF4-220ENST00000513578 TAF1CQ15572 869 aaPredicted RBP9.07□□□□□ -0.96
RNF4-220ENST00000513578 FAM187BQ17R55 369 aa9.07□□□□□ -0.96
RNF4-220ENST00000513578 WHAMMP3Q1A5X7 153 aa9.07□□□□□ -0.96
RNF4-220ENST00000513578 TMEM63BQ5T3F8 832 aa9.07□□□□□ -0.96
RNF4-220ENST00000513578 CRELD2Q6UXH1 353 aaPredicted RBP9.07□□□□□ -0.96
RNF4-220ENST00000513578 ENOSF1Q7L5Y1 443 aa9.07□□□□□ -0.96
RNF4-220ENST00000513578 ZNF571Q7Z3V5 609 aaPredicted RBP9.07□□□□□ -0.96
RNF4-220ENST00000513578 IFNL1Q8IU54 200 aa9.07□□□□□ -0.96
RNF4-220ENST00000513578 FBXL13Q8NEE6 735 aa9.07□□□□□ -0.96
RNF4-220ENST00000513578 ZSWIM2Q8NEG5 633 aa9.07□□□□□ -0.96
RNF4-220ENST00000513578 SLC30A5Q8TAD4 765 aa9.07□□□□□ -0.96
RNF4-220ENST00000513578 NPLOC4Q8TAT6 608 aa9.07□□□□□ -0.96
RNF4-220ENST00000513578 UBE2Q2Q8WVN8 375 aa9.07□□□□□ -0.96
RNF4-220ENST00000513578 ANKRD7Q92527 254 aa9.07□□□□□ -0.96
RNF4-220ENST00000513578 SECISBP2LQ93073 1101 aaKnown RBP9.07□□□□□ -0.96
RNF4-220ENST00000513578 SAAL1Q96ER3 474 aa9.07□□□□□ -0.96
RNF4-220ENST00000513578 BICD1Q96G01 975 aa9.07□□□□□ -0.96
RNF4-220ENST00000513578 C16orf70Q9BSU1 422 aa9.07□□□□□ -0.96
RNF4-220ENST00000513578 MRPL4Q9BYD3 311 aaKnown RBP9.07□□□□□ -0.96
RNF4-220ENST00000513578 SUCLA2Q9P2R7 463 aaPredicted RBP9.07□□□□□ -0.96
RNF4-220ENST00000513578 AJAP1Q9UKB5 411 aaPredicted RBP9.07□□□□□ -0.96
RNF4-220ENST00000513578 ZNF215Q9UL58 517 aaPredicted RBP9.07□□□□□ -0.96
RNF4-220ENST00000513578 GUCA1BQ9UMX6 200 aa9.07□□□□□ -0.96
RNF4-220ENST00000513578 A0A087X0T9 212 aa9.06□□□□□ -0.96
RNF4-220ENST00000513578 A0A0A6YYK5 440 aaPredicted RBP9.06□□□□□ -0.96
RNF4-220ENST00000513578 A6NJR5 290 aa9.06□□□□□ -0.96
RNF4-220ENST00000513578 EFCAB8A8MWE9 144 aa9.06□□□□□ -0.96
RNF4-220ENST00000513578 ACKR2O00590 384 aa9.06□□□□□ -0.96
RNF4-220ENST00000513578 ABLIM1O14639 778 aa9.06□□□□□ -0.96
RNF4-220ENST00000513578 FAM189A1O60320 539 aa9.06□□□□□ -0.96
RNF4-220ENST00000513578 EVI5O60447 810 aa9.06□□□□□ -0.96
RNF4-220ENST00000513578 TACC1O75410 805 aa9.06□□□□□ -0.96
RNF4-220ENST00000513578 C4BPAP04003 597 aaKnown RBP9.06□□□□□ -0.96
RNF4-220ENST00000513578 MMP3P08254 477 aa9.06□□□□□ -0.96
RNF4-220ENST00000513578 FAM228BP0C875 321 aa9.06□□□□□ -0.96
RNF4-220ENST00000513578 INSRRP14616 1297 aa9.06□□□□□ -0.96
RNF4-220ENST00000513578 SMPD1P17405 629 aa9.06□□□□□ -0.96
RNF4-220ENST00000513578 RGS19P49795 217 aa9.06□□□□□ -0.96
RNF4-220ENST00000513578 MFAP3P55082 362 aa9.06□□□□□ -0.96
RNF4-220ENST00000513578 CDC42EP1Q00587 391 aa9.06□□□□□ -0.96
RNF4-220ENST00000513578 GCNT1Q02742 428 aa9.06□□□□□ -0.96
RNF4-220ENST00000513578 MCL1Q07820 350 aa9.06□□□□□ -0.96
RNF4-220ENST00000513578 SREBF2Q12772 1141 aa9.06□□□□□ -0.96
RNF4-220ENST00000513578 DRP2Q13474 957 aa9.06□□□□□ -0.96
RNF4-220ENST00000513578 TCEAL1Q15170 157 aa9.06□□□□□ -0.96
RNF4-220ENST00000513578 MAPK6Q16659 721 aa9.06□□□□□ -0.96
RNF4-220ENST00000513578 ZACNQ401N2 412 aa9.06□□□□□ -0.96
RNF4-220ENST00000513578 EFCAB12Q6NXP0 572 aa9.06□□□□□ -0.96
RNF4-220ENST00000513578 GJB7Q6PEY0 223 aa9.06□□□□□ -0.96
RNF4-220ENST00000513578 TSHZ1Q6ZSZ6 1077 aa9.06□□□□□ -0.96
RNF4-220ENST00000513578 SV2AQ7L0J3 742 aa9.06□□□□□ -0.96
RNF4-220ENST00000513578 TRAPPC11Q7Z392 1133 aa9.06□□□□□ -0.96
RNF4-220ENST00000513578 TRIM50Q86XT4 487 aa9.06□□□□□ -0.96
RNF4-220ENST00000513578 CEP112Q8N8E3 955 aa9.06□□□□□ -0.96
RNF4-220ENST00000513578 OLIG1Q8TAK6 271 aa9.06□□□□□ -0.96
RNF4-220ENST00000513578 AFG1LQ8WV93 481 aa9.06□□□□□ -0.96
RNF4-220ENST00000513578 SOCS4Q8WXH5 440 aa9.06□□□□□ -0.96
RNF4-220ENST00000513578 SHC3Q92529 594 aa9.06□□□□□ -0.96
RNF4-220ENST00000513578 DHX38Q92620 1227 aaKnown RBP9.06□□□□□ -0.96
RNF4-220ENST00000513578 CALR3Q96L12 384 aaKnown RBP9.06□□□□□ -0.96
RNF4-220ENST00000513578 ACO2Q99798 780 aaKnown RBP9.06□□□□□ -0.96
RNF4-220ENST00000513578 FAM213AQ9BRX8 229 aa9.06□□□□□ -0.96
RNF4-220ENST00000513578 TARS2Q9BW92 718 aaKnown RBP9.06□□□□□ -0.96
RNF4-220ENST00000513578 HAPLN2Q9GZV7 340 aa9.06□□□□□ -0.96
RNF4-220ENST00000513578 RNPEPQ9H4A4 650 aa9.06□□□□□ -0.96
RNF4-220ENST00000513578 ZFYVE28Q9HCC9 887 aa9.06□□□□□ -0.96
RNF4-220ENST00000513578 PTPRHQ9HD43 1115 aa9.06□□□□□ -0.96
RNF4-220ENST00000513578 RAB20Q9NX57 234 aa9.06□□□□□ -0.96
RNF4-220ENST00000513578 TRIM10Q9UDY6 481 aa9.06□□□□□ -0.96
RNF4-220ENST00000513578 ADAMTS1Q9UHI8 967 aa9.06□□□□□ -0.96
RNF4-220ENST00000513578 CPA4Q9UI42 421 aa9.06□□□□□ -0.96
RNF4-220ENST00000513578 NAGPAQ9UK23 515 aa9.06□□□□□ -0.96
RNF4-220ENST00000513578 TRPC6Q9Y210 931 aa9.06□□□□□ -0.96
RNF4-220ENST00000513578 GNEQ9Y223 722 aaKnown RBP9.06□□□□□ -0.96
RNF4-220ENST00000513578 JRKLQ9Y4A0 524 aa9.06□□□□□ -0.96
RNF4-220ENST00000513578 CNTNAP2Q9UHC6 1331 aa9.05□□□□□ -0.96
RNF4-220ENST00000513578 RALGAPA2Q2PPJ7 1873 aa9.05□□□□□ -0.96
RNF4-220ENST00000513578 RRN3P2A6NIE6 340 aa9.05□□□□□ -0.96
RNF4-220ENST00000513578 H3BRB1 525 aa9.05□□□□□ -0.96
RNF4-220ENST00000513578 OGTO15294 1046 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms