RNA–Protein interactions for RNA: ENST00000513506.5

POLR2J3-218, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-218ENST00000513506 CASD1Q96PB1 797 aa17.01■□□□□ 0.31
POLR2J3-218ENST00000513506 HAPLN2Q9GZV7 340 aa17.01■□□□□ 0.31
POLR2J3-218ENST00000513506 EXOC1Q9NV70 894 aa17.01■□□□□ 0.31
POLR2J3-218ENST00000513506 RMND1Q9NWS8 449 aa17.01■□□□□ 0.31
POLR2J3-218ENST00000513506 TBC1D7Q9P0N9 293 aa17.01■□□□□ 0.31
POLR2J3-218ENST00000513506 CGNQ9P2M7 1197 aaKnown RBP17.01■□□□□ 0.31
POLR2J3-218ENST00000513506 USP20Q9Y2K6 914 aa17.01■□□□□ 0.31
POLR2J3-218ENST00000513506 YBX2Q9Y2T7 364 aaKnown RBP17.01■□□□□ 0.31
POLR2J3-218ENST00000513506 TRANK1O15050 2925 aa17.01■□□□□ 0.31
POLR2J3-218ENST00000513506 PTPRSQ13332 1948 aa17■□□□□ 0.31
POLR2J3-218ENST00000513506 HNRNPDLO14979 420 aaKnown RBP17■□□□□ 0.31
POLR2J3-218ENST00000513506 CLDN3O15551 220 aa17■□□□□ 0.31
POLR2J3-218ENST00000513506 OFD1O75665 1012 aa17■□□□□ 0.31
POLR2J3-218ENST00000513506 NPTXRO95502 500 aa17■□□□□ 0.31
POLR2J3-218ENST00000513506 GARTP22102 1010 aa17■□□□□ 0.31
POLR2J3-218ENST00000513506 ALKAL1Q6UXT8 129 aa17■□□□□ 0.31
POLR2J3-218ENST00000513506 TMCO2Q7Z6W1 182 aaPredicted RBP17■□□□□ 0.31
POLR2J3-218ENST00000513506 C12orf56Q8IXR9 622 aa17■□□□□ 0.31
POLR2J3-218ENST00000513506 GUF1Q8N442 669 aaKnown RBP17■□□□□ 0.31
POLR2J3-218ENST00000513506 CCDC47Q96A33 483 aaKnown RBP17■□□□□ 0.31
POLR2J3-218ENST00000513506 ZBTB45Q96K62 511 aaPredicted RBP17■□□□□ 0.31
POLR2J3-218ENST00000513506 RNF39Q9H2S5 420 aa17■□□□□ 0.31
POLR2J3-218ENST00000513506 CLSTN2Q9H4D0 955 aa17■□□□□ 0.31
POLR2J3-218ENST00000513506 MSRAQ9UJ68 235 aa17■□□□□ 0.31
POLR2J3-218ENST00000513506 LRFN2Q9ULH4 789 aa17■□□□□ 0.31
POLR2J3-218ENST00000513506 MYH11P35749 1972 aa17■□□□□ 0.31
POLR2J3-218ENST00000513506 MEIS3P2A8K0S8 358 aa16.99■□□□□ 0.31
POLR2J3-218ENST00000513506 ANKRD63C9JTQ0 380 aa16.99■□□□□ 0.31
POLR2J3-218ENST00000513506 SOX1O00570 391 aaPredicted RBP16.99■□□□□ 0.31
POLR2J3-218ENST00000513506 KIAA0391O15091 583 aaKnown RBP16.99■□□□□ 0.31
POLR2J3-218ENST00000513506 TGFB1I1O43294 461 aa16.99■□□□□ 0.31
POLR2J3-218ENST00000513506 UPP2O95045 317 aa16.99■□□□□ 0.31
POLR2J3-218ENST00000513506 ITGA4P13612 1032 aa16.99■□□□□ 0.31
POLR2J3-218ENST00000513506 DNAJB2P25686 324 aa16.99■□□□□ 0.31
POLR2J3-218ENST00000513506 LIG4P49917 911 aa16.99■□□□□ 0.31
POLR2J3-218ENST00000513506 RABGGTBP53611 331 aa16.99■□□□□ 0.31
POLR2J3-218ENST00000513506 NOLC1Q14978 699 aaKnown RBP eCLIP16.99■□□□□ 0.31
POLR2J3-218ENST00000513506 KNOP1Q1ED39 458 aaKnown RBP16.99■□□□□ 0.31
POLR2J3-218ENST00000513506 CDR2LQ86X02 465 aaPredicted RBP16.99■□□□□ 0.31
POLR2J3-218ENST00000513506 GSTCDQ8NEC7 633 aa16.99■□□□□ 0.31
POLR2J3-218ENST00000513506 GPT2Q8TD30 523 aa16.99■□□□□ 0.31
POLR2J3-218ENST00000513506 ZBED2Q9BTP6 218 aa16.99■□□□□ 0.31
POLR2J3-218ENST00000513506 TRIM6Q9C030 488 aaPredicted RBP16.99■□□□□ 0.31
POLR2J3-218ENST00000513506 GBP3Q9H0R5 595 aa16.99■□□□□ 0.31
POLR2J3-218ENST00000513506 NXF3Q9H4D5 531 aaKnown RBP16.99■□□□□ 0.31
POLR2J3-218ENST00000513506 SLC39A2Q9NP94 309 aa16.99■□□□□ 0.31
POLR2J3-218ENST00000513506 KANSL3Q9P2N6 904 aa16.99■□□□□ 0.31
POLR2J3-218ENST00000513506 CARNS1A5YM72 827 aa16.98■□□□□ 0.31
POLR2J3-218ENST00000513506 OGTO15294 1046 aa16.98■□□□□ 0.31
POLR2J3-218ENST00000513506 PRPF6O94906 941 aaKnown RBP16.98■□□□□ 0.31
POLR2J3-218ENST00000513506 MBD3O95983 291 aa16.98■□□□□ 0.31
POLR2J3-218ENST00000513506 FGFR1P11362 822 aa16.98■□□□□ 0.31
POLR2J3-218ENST00000513506 PBX2P40425 430 aa16.98■□□□□ 0.31
POLR2J3-218ENST00000513506 TAP1Q03518 808 aa16.98■□□□□ 0.31
POLR2J3-218ENST00000513506 MYBPC2Q14324 1141 aa16.98■□□□□ 0.31
POLR2J3-218ENST00000513506 ZNF568Q3ZCX4 644 aa16.98■□□□□ 0.31
POLR2J3-218ENST00000513506 TPRNQ4KMQ1 711 aa16.98■□□□□ 0.31
POLR2J3-218ENST00000513506 ZNF658Q5TYW1 1059 aaPredicted RBP16.98■□□□□ 0.31
POLR2J3-218ENST00000513506 FOXR2Q6PJQ5 311 aa16.98■□□□□ 0.31
POLR2J3-218ENST00000513506 GLB1LQ6UWU2 654 aa16.98■□□□□ 0.31
POLR2J3-218ENST00000513506 RBM43Q6ZSC3 357 aaKnown RBP16.98■□□□□ 0.31
POLR2J3-218ENST00000513506 SMARCE1Q969G3 411 aa16.98■□□□□ 0.31
POLR2J3-218ENST00000513506 FBXL18Q96ME1 805 aa16.98■□□□□ 0.31
POLR2J3-218ENST00000513506 TSPAN18Q96SJ8 248 aa16.98■□□□□ 0.31
POLR2J3-218ENST00000513506 YME1L1Q96TA2 773 aa16.98■□□□□ 0.31
POLR2J3-218ENST00000513506 MRPL9Q9BYD2 267 aaKnown RBP16.98■□□□□ 0.31
POLR2J3-218ENST00000513506 KCTD10Q9H3F6 313 aa16.98■□□□□ 0.31
POLR2J3-218ENST00000513506 RSAD1Q9HA92 442 aa16.98■□□□□ 0.31
POLR2J3-218ENST00000513506 PLEKHA5Q9HAU0 1116 aa16.98■□□□□ 0.31
POLR2J3-218ENST00000513506 KIAA1468Q9P260 1216 aa16.98■□□□□ 0.31
POLR2J3-218ENST00000513506 LCHNA4D1U4 455 aa16.97■□□□□ 0.31
POLR2J3-218ENST00000513506 LINC01553A4QN01 128 aa16.97■□□□□ 0.31
POLR2J3-218ENST00000513506 ARL5CA6NH57 179 aa16.97■□□□□ 0.31
POLR2J3-218ENST00000513506 PDXKO00764 312 aa16.97■□□□□ 0.31
POLR2J3-218ENST00000513506 KIF20AO95235 890 aa16.97■□□□□ 0.31
POLR2J3-218ENST00000513506 CLTAP09496 248 aa16.97■□□□□ 0.31
POLR2J3-218ENST00000513506 MCCD1P59942 119 aaPredicted RBP16.97■□□□□ 0.31
POLR2J3-218ENST00000513506 ERVK-21P61565 698 aa16.97■□□□□ 0.31
POLR2J3-218ENST00000513506 MORC3Q14149 939 aa16.97■□□□□ 0.31
POLR2J3-218ENST00000513506 NFIL3Q16649 462 aa16.97■□□□□ 0.31
POLR2J3-218ENST00000513506 NOMO2Q5JPE7 1267 aa16.97■□□□□ 0.31
POLR2J3-218ENST00000513506 LRRC55Q6ZSA7 311 aa16.97■□□□□ 0.31
POLR2J3-218ENST00000513506 SLC9A9Q8IVB4 645 aa16.97■□□□□ 0.31
POLR2J3-218ENST00000513506 TRIML1Q8N9V2 468 aa16.97■□□□□ 0.31
POLR2J3-218ENST00000513506 GOLGA5Q8TBA6 731 aa16.97■□□□□ 0.31
POLR2J3-218ENST00000513506 LPPQ93052 612 aa16.97■□□□□ 0.31
POLR2J3-218ENST00000513506 TIFAQ96CG3 184 aa16.97■□□□□ 0.31
POLR2J3-218ENST00000513506 BICD1Q96G01 975 aa16.97■□□□□ 0.31
POLR2J3-218ENST00000513506 SAMD11Q96NU1 681 aa16.97■□□□□ 0.31
POLR2J3-218ENST00000513506 TCHPQ9BT92 498 aa16.97■□□□□ 0.31
POLR2J3-218ENST00000513506 DMAC2Q9NW81 257 aa16.97■□□□□ 0.31
POLR2J3-218ENST00000513506 HES2Q9Y543 173 aa16.97■□□□□ 0.31
POLR2J3-218ENST00000513506 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.96■□□□□ 0.31
POLR2J3-218ENST00000513506 C5orf67F2Z3F1 127 aa16.96■□□□□ 0.31
POLR2J3-218ENST00000513506 MEFVO15553 781 aaPredicted RBP16.96■□□□□ 0.31
POLR2J3-218ENST00000513506 ARHGEF15O94989 841 aa16.96■□□□□ 0.31
POLR2J3-218ENST00000513506 CA3P07451 260 aa16.96■□□□□ 0.31
POLR2J3-218ENST00000513506 MYOGP15173 224 aa16.96■□□□□ 0.31
POLR2J3-218ENST00000513506 KCNE1P15382 129 aa16.96■□□□□ 0.31
POLR2J3-218ENST00000513506 FXR1P51114 621 aaKnown RBP eCLIP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms