RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 SETQ01105 290 aaPredicted RBP12.56□□□□□ -0.4
RNF4-218ENST00000513284 CSRP2Q16527 193 aa12.56□□□□□ -0.4
RNF4-218ENST00000513284 LAIR1Q6GTX8 287 aa12.56□□□□□ -0.4
RNF4-218ENST00000513284 PRSS55Q6UWB4 352 aaPredicted RBP12.56□□□□□ -0.4
RNF4-218ENST00000513284 B3GNT9Q6UX72 402 aa12.56□□□□□ -0.4
RNF4-218ENST00000513284 PRR23CQ6ZRP0 262 aa12.56□□□□□ -0.4
RNF4-218ENST00000513284 GPR65Q8IYL9 337 aa12.56□□□□□ -0.4
RNF4-218ENST00000513284 ZNF579Q8NAF0 562 aaKnown RBP12.56□□□□□ -0.4
RNF4-218ENST00000513284 EXOC6Q8TAG9 804 aa12.56□□□□□ -0.4
RNF4-218ENST00000513284 SLC5A5Q92911 643 aa12.56□□□□□ -0.4
RNF4-218ENST00000513284 ZFP42Q96MM3 310 aa12.56□□□□□ -0.4
RNF4-218ENST00000513284 NLRP4Q96MN2 994 aa12.56□□□□□ -0.4
RNF4-218ENST00000513284 CLSTN3Q9BQT9 956 aa12.56□□□□□ -0.4
RNF4-218ENST00000513284 EIF2AQ9BY44 585 aaKnown RBP12.56□□□□□ -0.4
RNF4-218ENST00000513284 HEBP1Q9NRV9 189 aa12.56□□□□□ -0.4
RNF4-218ENST00000513284 HCFC1R1Q9NWW0 138 aa12.56□□□□□ -0.4
RNF4-218ENST00000513284 LAMA1P25391 3075 aa12.55□□□□□ -0.4
RNF4-218ENST00000513284 ADAM12O43184 909 aa12.55□□□□□ -0.4
RNF4-218ENST00000513284 CHMP2AO43633 222 aa12.55□□□□□ -0.4
RNF4-218ENST00000513284 LRP3O75074 770 aa12.55□□□□□ -0.4
RNF4-218ENST00000513284 CDC27P30260 824 aa12.55□□□□□ -0.4
RNF4-218ENST00000513284 PFKPQ01813 784 aa12.55□□□□□ -0.4
RNF4-218ENST00000513284 ADCY1Q08828 1119 aa12.55□□□□□ -0.4
RNF4-218ENST00000513284 DMWDQ09019 674 aa12.55□□□□□ -0.4
RNF4-218ENST00000513284 USP41Q3LFD5 358 aa12.55□□□□□ -0.4
RNF4-218ENST00000513284 XKR3Q5GH77 459 aa12.55□□□□□ -0.4
RNF4-218ENST00000513284 RTP2Q5QGT7 225 aa12.55□□□□□ -0.4
RNF4-218ENST00000513284 TTC22Q5TAA0 569 aa12.55□□□□□ -0.4
RNF4-218ENST00000513284 FUT10Q6P4F1 479 aa12.55□□□□□ -0.4
RNF4-218ENST00000513284 APOA5Q6Q788 366 aa12.55□□□□□ -0.4
RNF4-218ENST00000513284 ANO5Q75V66 913 aa12.55□□□□□ -0.4
RNF4-218ENST00000513284 MTSS1LQ765P7 747 aa12.55□□□□□ -0.4
RNF4-218ENST00000513284 NPAS3Q8IXF0 933 aa12.55□□□□□ -0.4
RNF4-218ENST00000513284 PHF20Q9BVI0 1012 aa12.55□□□□□ -0.4
RNF4-218ENST00000513284 ZMYND12Q9H0C1 365 aa12.55□□□□□ -0.4
RNF4-218ENST00000513284 GLT8D2Q9H1C3 349 aa12.55□□□□□ -0.4
RNF4-218ENST00000513284 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.55□□□□□ -0.4
RNF4-218ENST00000513284 DNMT3BQ9UBC3 853 aaKnown RBP12.55□□□□□ -0.4
RNF4-218ENST00000513284 SEPT9Q9UHD8 586 aaPredicted RBP12.55□□□□□ -0.4
RNF4-218ENST00000513284 FBXW11Q9UKB1 542 aa12.55□□□□□ -0.4
RNF4-218ENST00000513284 HES2Q9Y543 173 aa12.55□□□□□ -0.4
RNF4-218ENST00000513284 FASNP49327 2511 aaKnown RBP12.54□□□□□ -0.4
RNF4-218ENST00000513284 SLC27A2O14975 620 aa12.54□□□□□ -0.4
RNF4-218ENST00000513284 NCAM2O15394 837 aa12.54□□□□□ -0.4
RNF4-218ENST00000513284 CCL16O15467 120 aa12.54□□□□□ -0.4
RNF4-218ENST00000513284 PSMD10O75832 226 aa12.54□□□□□ -0.4
RNF4-218ENST00000513284 ITGA4P13612 1032 aa12.54□□□□□ -0.4
RNF4-218ENST00000513284 HOXC13P31276 330 aa12.54□□□□□ -0.4
RNF4-218ENST00000513284 MLH1P40692 756 aa12.54□□□□□ -0.4
RNF4-218ENST00000513284 DNM2P50570 870 aa12.54□□□□□ -0.4
RNF4-218ENST00000513284 SCNN1GP51170 649 aa12.54□□□□□ -0.4
RNF4-218ENST00000513284 SRSF5Q13243 272 aaKnown RBP12.54□□□□□ -0.4
RNF4-218ENST00000513284 GAS6Q14393 721 aa12.54□□□□□ -0.4
RNF4-218ENST00000513284 TANGO2Q6ICL3 276 aa12.54□□□□□ -0.4
RNF4-218ENST00000513284 ZNF852Q6ZMS4 543 aa12.54□□□□□ -0.4
RNF4-218ENST00000513284 LNX1Q8TBB1 728 aaPredicted RBP12.54□□□□□ -0.4
RNF4-218ENST00000513284 PRPF31Q8WWY3 499 aaKnown RBP12.54□□□□□ -0.4
RNF4-218ENST00000513284 RIT2Q99578 217 aa12.54□□□□□ -0.4
RNF4-218ENST00000513284 COLEC11Q9BWP8 271 aa12.54□□□□□ -0.4
RNF4-218ENST00000513284 CHRDQ9H2X0 955 aa12.54□□□□□ -0.4
RNF4-218ENST00000513284 RXFP3Q9NSD7 469 aa12.54□□□□□ -0.4
RNF4-218ENST00000513284 CACNG4Q9UBN1 327 aa12.54□□□□□ -0.4
RNF4-218ENST00000513284 IPPQ9Y573 584 aa12.54□□□□□ -0.4
RNF4-218ENST00000513284 CEP295Q9C0D2 2601 aa12.54□□□□□ -0.4
RNF4-218ENST00000513284 ZFYVE26Q68DK2 2539 aa12.53□□□□□ -0.4
RNF4-218ENST00000513284 DDX11L8A8MPP1 907 aa12.53□□□□□ -0.4
RNF4-218ENST00000513284 hCG_1984214I3L0E3 225 aa12.53□□□□□ -0.4
RNF4-218ENST00000513284 PROS1P07225 676 aa12.53□□□□□ -0.4
RNF4-218ENST00000513284 HNRNPA1P09651 372 aaKnown RBP eCLIP12.53□□□□□ -0.4
RNF4-218ENST00000513284 SRGAP2CP0DJJ0 459 aa12.53□□□□□ -0.4
RNF4-218ENST00000513284 SFNP31947 248 aa12.53□□□□□ -0.4
RNF4-218ENST00000513284 NECTIN1Q15223 517 aa12.53□□□□□ -0.4
RNF4-218ENST00000513284 PFKFB3Q16875 520 aaPredicted RBP12.53□□□□□ -0.4
RNF4-218ENST00000513284 PLA2G4FQ68DD2 849 aa12.53□□□□□ -0.4
RNF4-218ENST00000513284 ZNF713Q8N859 430 aaPredicted RBP12.53□□□□□ -0.4
RNF4-218ENST00000513284 PAAF1Q9BRP4 392 aa12.53□□□□□ -0.4
RNF4-218ENST00000513284 UBN1Q9NPG3 1134 aa12.53□□□□□ -0.4
RNF4-218ENST00000513284 RBM28Q9NW13 759 aaKnown RBP12.53□□□□□ -0.4
RNF4-218ENST00000513284 TCEAL9Q9UHQ7 104 aa12.53□□□□□ -0.4
RNF4-218ENST00000513284 COL4A3BPQ9Y5P4 624 aa12.53□□□□□ -0.4
RNF4-218ENST00000513284 F5P12259 2224 aa12.53□□□□□ -0.4
RNF4-218ENST00000513284 ESYT2A0FGR8 921 aa12.52□□□□□ -0.41
RNF4-218ENST00000513284 GAS7O60861 476 aa12.52□□□□□ -0.41
RNF4-218ENST00000513284 ECI2O75521 394 aa12.52□□□□□ -0.41
RNF4-218ENST00000513284 C8AP07357 584 aa12.52□□□□□ -0.41
RNF4-218ENST00000513284 ADD1P35611 737 aaKnown RBP12.52□□□□□ -0.41
RNF4-218ENST00000513284 JAK3P52333 1124 aa12.52□□□□□ -0.41
RNF4-218ENST00000513284 NRLP54845 237 aa12.52□□□□□ -0.41
RNF4-218ENST00000513284 NPEPPSP55786 919 aa12.52□□□□□ -0.41
RNF4-218ENST00000513284 EXOSC10Q01780 885 aaKnown RBP12.52□□□□□ -0.41
RNF4-218ENST00000513284 SATB1Q01826 763 aa12.52□□□□□ -0.41
RNF4-218ENST00000513284 SIM2Q14190 667 aaPredicted RBP12.52□□□□□ -0.41
RNF4-218ENST00000513284 ACAP1Q15027 740 aa12.52□□□□□ -0.41
RNF4-218ENST00000513284 RTN1Q16799 776 aa12.52□□□□□ -0.41
RNF4-218ENST00000513284 PRR23BQ6ZRT6 265 aa12.52□□□□□ -0.41
RNF4-218ENST00000513284 SRGAP1Q7Z6B7 1085 aa12.52□□□□□ -0.41
RNF4-218ENST00000513284 ING5Q8WYH8 240 aa12.52□□□□□ -0.41
RNF4-218ENST00000513284 TMEM143Q96AN5 459 aa12.52□□□□□ -0.41
RNF4-218ENST00000513284 MCRS1Q96EZ8 462 aa12.52□□□□□ -0.41
RNF4-218ENST00000513284 LSG1Q9H089 658 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms