RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 MGEA5O60502 916 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 SYNCRIPO60506 623 aaKnown RBP4.51□□□□□ -1.69
VCAN-209ENST00000513016 ZRANB2O95218 330 aaKnown RBP eCLIP4.51□□□□□ -1.69
VCAN-209ENST00000513016 CYP2C8P10632 490 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 KPNA1P52294 538 aaPredicted RBP4.51□□□□□ -1.69
VCAN-209ENST00000513016 IKBKEQ14164 716 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 EPHA10Q5JZY3 1008 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 PRAMEF18Q5VWM3 479 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 STAG2Q8N3U4 1231 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 RMDN1Q96DB5 314 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 PSMB7Q99436 277 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 FAM96AQ9H5X1 160 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 XPNPEP3Q9NQH7 507 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 NDFIP2Q9NV92 336 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 KLHL14Q9P2G3 628 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 ERCC6L2Q5T890 1561 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 TRPM1Q7Z4N2 1603 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 GLI2P10070 1586 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 FAM95CA0A1B0GW59 222 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 TTC36A6NLP5 189 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 CREB3O43889 395 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 DNAJC6O75061 913 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 ALDH1A2O94788 518 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 HIST1H2AGP0C0S8 130 aaPredicted RBP4.51□□□□□ -1.69
VCAN-209ENST00000513016 VCLP18206 1134 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 HIST1H2ADP20671 130 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 GARTP22102 1010 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 CYP2C19P33261 490 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 IL9RQ01113 521 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 PPIL2Q13356 520 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 SLMAPQ14BN4 828 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 LONRF3Q496Y0 759 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.51□□□□□ -1.69
VCAN-209ENST00000513016 FKBP1CQ5VVH2 108 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 ELOA2Q8IYF1 753 aaPredicted RBP4.51□□□□□ -1.69
VCAN-209ENST00000513016 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.51□□□□□ -1.69
VCAN-209ENST00000513016 HIST1H2AHQ96KK5 128 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 HIST1H2AJQ99878 128 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 H2AFJQ9BTM1 129 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 DPH5Q9H2P9 285 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 ABHD16BQ9H3Z7 469 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 HACD3Q9P035 362 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 SUN2Q9UH99 717 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 SLC25A13Q9UJS0 675 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 SNX9Q9Y5X1 595 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 SLC30A1Q9Y6M5 507 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 PDS5AQ29RF7 1337 aaKnown RBP4.51□□□□□ -1.69
VCAN-209ENST00000513016 MUTP22033 750 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 ETFBP38117 255 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 AP1B1Q10567 949 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 BTG3Q14201 252 aaPredicted RBP4.51□□□□□ -1.69
VCAN-209ENST00000513016 EFHC1Q5JVL4 640 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 IQSEC1Q6DN90 963 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 TAF2Q6P1X5 1199 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 KIRREL3Q8IZU9 778 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 FBXL13Q8NEE6 735 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 CDCA5Q96FF9 252 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 YIPF2Q9BWQ6 316 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 FAM129AQ9BZQ8 928 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 MUC3BQ9H195 1237 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 CLCA2Q9UQC9 943 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 PRR29P0C7W0 189 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 ADKP55263 362 aaKnown RBP4.51□□□□□ -1.69
VCAN-209ENST00000513016 YWHAHQ04917 246 aaPredicted RBP4.51□□□□□ -1.69
VCAN-209ENST00000513016 COASYQ13057 564 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 NME3Q13232 169 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 HEATR6Q6AI08 1181 aaKnown RBP4.51□□□□□ -1.69
VCAN-209ENST00000513016 ZNF280DQ6N043 979 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 TAS2R42Q7RTR8 314 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 TBC1D10CQ8IV04 446 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 EFHD1Q9BUP0 239 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 SIK2Q9H0K1 926 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 EHD4Q9H223 541 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 RSPH14Q9UHP6 348 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 NCKAP1Q9Y2A7 1128 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 ARHGEF40Q8TER5 1519 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 KPNA7A9QM74 516 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 E9PMD0 336 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 PYGLP06737 847 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 PLS3P13797 630 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 GCLMP48507 274 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 ZNF445P59923 1031 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 TPI1P60174 286 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 PRKCEQ02156 737 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 NECTIN1Q15223 517 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 MTFR1Q15390 333 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 ZNF827Q17R98 1081 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 GPIHBP1Q8IV16 184 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 FAM133AQ8N9E0 248 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 CDC26Q8NHZ8 85 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 OSCP1Q8WVF1 389 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 FGD4Q96M96 766 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 LRRC37BQ96QE4 947 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 TUBB6Q9BUF5 446 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 TMEM260Q9NX78 707 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 PCDHB6Q9Y5E3 794 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 TTLL13PA6NNM8 815 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 GOLGA8KD6RF30 607 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 POC1B-GALNT4F8VUJ3 575 aa4.51□□□□□ -1.69
VCAN-209ENST00000513016 ADCY3O60266 1144 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms