RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 MARCH5Q9NX47 278 aa13.96□□□□□ -0.17
VEGFA-216ENST00000512683 FAM205CA6NFA0 338 aa13.95□□□□□ -0.18
VEGFA-216ENST00000512683 MBTD1Q05BQ5 628 aa13.95□□□□□ -0.18
VEGFA-216ENST00000512683 ST3GAL1Q11201 340 aa13.95□□□□□ -0.18
VEGFA-216ENST00000512683 CALCRLQ16602 461 aa13.95□□□□□ -0.18
VEGFA-216ENST00000512683 KANK3Q6NY19 840 aa13.95□□□□□ -0.18
VEGFA-216ENST00000512683 SLC27A1Q6PCB7 646 aa13.95□□□□□ -0.18
VEGFA-216ENST00000512683 PPP4R3CPQ6ZMV5 832 aa13.95□□□□□ -0.18
VEGFA-216ENST00000512683 RTL10Q7L3V2 364 aa13.95□□□□□ -0.18
VEGFA-216ENST00000512683 MCPH1Q8NEM0 835 aa13.95□□□□□ -0.18
VEGFA-216ENST00000512683 TNFRSF25Q93038 417 aa13.95□□□□□ -0.18
VEGFA-216ENST00000512683 CCDC43Q96MW1 224 aaKnown RBP13.95□□□□□ -0.18
VEGFA-216ENST00000512683 EIF2AQ9BY44 585 aaKnown RBP13.95□□□□□ -0.18
VEGFA-216ENST00000512683 RNF39Q9H2S5 420 aa13.95□□□□□ -0.18
VEGFA-216ENST00000512683 TTC12Q9H892 705 aaPredicted RBP13.95□□□□□ -0.18
VEGFA-216ENST00000512683 MAN1C1Q9NR34 630 aa13.95□□□□□ -0.18
VEGFA-216ENST00000512683 PRG3Q9Y2Y8 225 aaPredicted RBP13.95□□□□□ -0.18
VEGFA-216ENST00000512683 ZBTB39O15060 712 aa13.94□□□□□ -0.18
VEGFA-216ENST00000512683 SSBP05455 408 aaKnown RBP eCLIP13.94□□□□□ -0.18
VEGFA-216ENST00000512683 ARF4P18085 180 aaPredicted RBP13.94□□□□□ -0.18
VEGFA-216ENST00000512683 GLRA2P23416 452 aa13.94□□□□□ -0.18
VEGFA-216ENST00000512683 RARRES1P49788 294 aa13.94□□□□□ -0.18
VEGFA-216ENST00000512683 CYP4A11Q02928 519 aa13.94□□□□□ -0.18
VEGFA-216ENST00000512683 GRIK3Q13003 919 aa13.94□□□□□ -0.18
VEGFA-216ENST00000512683 NR5A1Q13285 461 aa13.94□□□□□ -0.18
VEGFA-216ENST00000512683 FAM187BQ17R55 369 aa13.94□□□□□ -0.18
VEGFA-216ENST00000512683 PDXDC1Q6P996 788 aa13.94□□□□□ -0.18
VEGFA-216ENST00000512683 LILRA6Q6PI73 481 aa13.94□□□□□ -0.18
VEGFA-216ENST00000512683 TAS1R1Q7RTX1 841 aa13.94□□□□□ -0.18
VEGFA-216ENST00000512683 NSUN7Q8NE18 718 aaKnown RBP13.94□□□□□ -0.18
VEGFA-216ENST00000512683 GSTCDQ8NEC7 633 aa13.94□□□□□ -0.18
VEGFA-216ENST00000512683 MTMR9Q96QG7 549 aa13.94□□□□□ -0.18
VEGFA-216ENST00000512683 NT5C3AQ9H0P0 336 aa13.94□□□□□ -0.18
VEGFA-216ENST00000512683 TUFT1Q9NNX1 390 aa13.94□□□□□ -0.18
VEGFA-216ENST00000512683 PRMT7Q9NVM4 692 aaPredicted RBP13.94□□□□□ -0.18
VEGFA-216ENST00000512683 MIOSQ9NXC5 875 aa13.94□□□□□ -0.18
VEGFA-216ENST00000512683 FBXL21Q9UKT6 434 aa13.94□□□□□ -0.18
VEGFA-216ENST00000512683 WDFY4Q6ZS81 3184 aa13.94□□□□□ -0.18
VEGFA-216ENST00000512683 JAK2O60674 1132 aa13.93□□□□□ -0.18
VEGFA-216ENST00000512683 TADA2AO75478 443 aa13.93□□□□□ -0.18
VEGFA-216ENST00000512683 NPR3P17342 541 aa13.93□□□□□ -0.18
VEGFA-216ENST00000512683 MUTP22033 750 aa13.93□□□□□ -0.18
VEGFA-216ENST00000512683 MLH1P40692 756 aa13.93□□□□□ -0.18
VEGFA-216ENST00000512683 SCNN1GP51170 649 aa13.93□□□□□ -0.18
VEGFA-216ENST00000512683 ELAVL2Q12926 359 aaKnown RBP13.93□□□□□ -0.18
VEGFA-216ENST00000512683 ORC2Q13416 577 aaPredicted RBP13.93□□□□□ -0.18
VEGFA-216ENST00000512683 CAPSQ13938 189 aa13.93□□□□□ -0.18
VEGFA-216ENST00000512683 TRIM29Q14134 588 aa13.93□□□□□ -0.18
VEGFA-216ENST00000512683 SLC44A3Q8N4M1 653 aa13.93□□□□□ -0.18
VEGFA-216ENST00000512683 FLCNQ8NFG4 579 aa13.93□□□□□ -0.18
VEGFA-216ENST00000512683 SMG7Q92540 1137 aaKnown RBP13.93□□□□□ -0.18
VEGFA-216ENST00000512683 NKD2Q969F2 451 aaPredicted RBP13.93□□□□□ -0.18
VEGFA-216ENST00000512683 BORCS6Q96GS4 357 aa13.93□□□□□ -0.18
VEGFA-216ENST00000512683 NACC1Q96RE7 527 aa13.93□□□□□ -0.18
VEGFA-216ENST00000512683 PRKD2Q9BZL6 878 aa13.93□□□□□ -0.18
VEGFA-216ENST00000512683 C2orf40Q9H1Z8 148 aa13.93□□□□□ -0.18
VEGFA-216ENST00000512683 FZD8Q9H461 694 aa13.93□□□□□ -0.18
VEGFA-216ENST00000512683 FAM86C1Q9NVL1 165 aa13.93□□□□□ -0.18
VEGFA-216ENST00000512683 ADAM28Q9UKQ2 775 aa13.93□□□□□ -0.18
VEGFA-216ENST00000512683 RIF1Q5UIP0 2472 aaKnown RBP13.93□□□□□ -0.18
VEGFA-216ENST00000512683 CLUHO75153 1309 aa13.92□□□□□ -0.18
VEGFA-216ENST00000512683 C2CD2LO14523 706 aa13.92□□□□□ -0.18
VEGFA-216ENST00000512683 NEMFO60524 1076 aa13.92□□□□□ -0.18
VEGFA-216ENST00000512683 HNRNPA1P09651 372 aaKnown RBP eCLIP13.92□□□□□ -0.18
VEGFA-216ENST00000512683 SRFP11831 508 aa13.92□□□□□ -0.18
VEGFA-216ENST00000512683 GBP2P32456 591 aaPredicted RBP13.92□□□□□ -0.18
VEGFA-216ENST00000512683 TXKP42681 527 aa13.92□□□□□ -0.18
VEGFA-216ENST00000512683 PHLDB3Q6NSJ2 640 aa13.92□□□□□ -0.18
VEGFA-216ENST00000512683 FUT10Q6P4F1 479 aa13.92□□□□□ -0.18
VEGFA-216ENST00000512683 ZBTB8OSQ8IWT0 167 aa13.92□□□□□ -0.18
VEGFA-216ENST00000512683 CCDC105Q8IYK2 499 aa13.92□□□□□ -0.18
VEGFA-216ENST00000512683 ASAP3Q8TDY4 903 aa13.92□□□□□ -0.18
VEGFA-216ENST00000512683 CPB2Q96IY4 423 aa13.92□□□□□ -0.18
VEGFA-216ENST00000512683 KIF2CQ99661 725 aa13.92□□□□□ -0.18
VEGFA-216ENST00000512683 POLR3CQ9BUI4 534 aaPredicted RBP13.92□□□□□ -0.18
VEGFA-216ENST00000512683 PIDD1Q9HB75 910 aa13.92□□□□□ -0.18
VEGFA-216ENST00000512683 HES2Q9Y543 173 aa13.92□□□□□ -0.18
VEGFA-216ENST00000512683 SF3B1O75533 1304 aaKnown RBP eCLIP13.91□□□□□ -0.18
VEGFA-216ENST00000512683 PRR23AA6NEV1 266 aa13.91□□□□□ -0.18
VEGFA-216ENST00000512683 BTBD18B2RXH4 712 aa13.91□□□□□ -0.18
VEGFA-216ENST00000512683 ANHXE9PGG2 379 aa13.91□□□□□ -0.18
VEGFA-216ENST00000512683 TGM5O43548 720 aa13.91□□□□□ -0.18
VEGFA-216ENST00000512683 ZMYND10O75800 440 aa13.91□□□□□ -0.18
VEGFA-216ENST00000512683 POU2F2P09086 479 aa13.91□□□□□ -0.18
VEGFA-216ENST00000512683 LAMP2P13473 410 aa13.91□□□□□ -0.18
VEGFA-216ENST00000512683 HOXA9P31269 272 aa13.91□□□□□ -0.18
VEGFA-216ENST00000512683 SAFBQ15424 915 aaKnown RBP eCLIP13.91□□□□□ -0.18
VEGFA-216ENST00000512683 UVSSAQ2YD98 709 aa13.91□□□□□ -0.18
VEGFA-216ENST00000512683 C8orf34Q49A92 452 aa13.91□□□□□ -0.18
VEGFA-216ENST00000512683 CDCA2Q69YH5 1023 aaPredicted RBP13.91□□□□□ -0.18
VEGFA-216ENST00000512683 CWF19L1Q69YN2 538 aaKnown RBP13.91□□□□□ -0.18
VEGFA-216ENST00000512683 SIX5Q8N196 739 aa13.91□□□□□ -0.18
VEGFA-216ENST00000512683 DTWD2Q8NBA8 298 aa13.91□□□□□ -0.18
VEGFA-216ENST00000512683 ZNF707Q96C28 371 aaPredicted RBP13.91□□□□□ -0.18
VEGFA-216ENST00000512683 ZFP42Q96MM3 310 aa13.91□□□□□ -0.18
VEGFA-216ENST00000512683 GPR62Q9BZJ7 368 aa13.91□□□□□ -0.18
VEGFA-216ENST00000512683 POLR3FQ9H1D9 316 aaPredicted RBP13.91□□□□□ -0.18
VEGFA-216ENST00000512683 SMOC2Q9H3U7 446 aa13.91□□□□□ -0.18
VEGFA-216ENST00000512683 SLC2A4RGQ9NR83 387 aa13.91□□□□□ -0.18
VEGFA-216ENST00000512683 BMP2KQ9NSY1 1161 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms